RNA–Protein interactions for RNA: YLL039C

UBI4, Transcript of Ubiquitin, yeastyeast

Gene UBI4, Length 1,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBI4YLL039C PDS1P40316 373 aaPredicted RBP4.39□□□□□ -1.71
UBI4YLL039C GCD14P46959 383 aaPredicted RBP4.39□□□□□ -1.71
UBI4YLL039C CIS3P47001 227 aa4.39□□□□□ -1.71
UBI4YLL039C MSE1P48525 536 aa4.39□□□□□ -1.71
UBI4YLL039C IMD4P50094 524 aaKnown RBP4.39□□□□□ -1.71
UBI4YLL039C RNY1Q02933 434 aaKnown RBP4.39□□□□□ -1.71
UBI4YLL039C NHP10Q03435 203 aa4.39□□□□□ -1.71
UBI4YLL039C YMR155WQ03795 547 aa4.39□□□□□ -1.71
UBI4YLL039C TRM12Q04235 462 aa4.39□□□□□ -1.71
UBI4YLL039C SPO20Q04359 397 aa4.39□□□□□ -1.71
UBI4YLL039C FMP42Q04991 504 aa4.39□□□□□ -1.71
UBI4YLL039C TMA10Q06177 86 aa4.39□□□□□ -1.71
UBI4YLL039C RXT3Q07458 294 aa4.39□□□□□ -1.71
UBI4YLL039C THI73Q07904 523 aa4.39□□□□□ -1.71
UBI4YLL039C GPB1Q08886 897 aa4.39□□□□□ -1.71
UBI4YLL039C MDY2Q12285 212 aa4.39□□□□□ -1.71
UBI4YLL039C CSF1Q12150 2958 aa4.39□□□□□ -1.71
UBI4YLL039C STT4P37297 1900 aa4.38□□□□□ -1.71
UBI4YLL039C RED1P14291 827 aa4.38□□□□□ -1.71
UBI4YLL039C MET8P15807 274 aa4.38□□□□□ -1.71
UBI4YLL039C RPB4P20433 221 aaPredicted RBP4.38□□□□□ -1.71
UBI4YLL039C FAR1P21268 830 aa4.38□□□□□ -1.71
UBI4YLL039C CLB3P24870 427 aa4.38□□□□□ -1.71
UBI4YLL039C ATP11P32453 318 aa4.38□□□□□ -1.71
UBI4YLL039C NUP120P35729 1037 aa4.38□□□□□ -1.71
UBI4YLL039C RCN1P36054 211 aa4.38□□□□□ -1.71
UBI4YLL039C MRPL37P36532 105 aa4.38□□□□□ -1.71
UBI4YLL039C RIM2P38127 377 aa4.38□□□□□ -1.71
UBI4YLL039C YBR032WP38223 100 aa4.38□□□□□ -1.71
UBI4YLL039C PHO89P38361 574 aa4.38□□□□□ -1.71
UBI4YLL039C DED81P38707 554 aaKnown RBP4.38□□□□□ -1.71
UBI4YLL039C YHR045WP38775 560 aa4.38□□□□□ -1.71
UBI4YLL039C ELO1P39540 310 aa4.38□□□□□ -1.71
UBI4YLL039C OAF1P39720 1047 aaPredicted RBP4.38□□□□□ -1.71
UBI4YLL039C GIM4P40005 111 aaKnown RBP4.38□□□□□ -1.71
UBI4YLL039C LTP1P40347 161 aa4.38□□□□□ -1.71
UBI4YLL039C UTP18P40362 594 aaPredicted RBP4.38□□□□□ -1.71
UBI4YLL039C PFK26P40433 827 aaKnown RBP4.38□□□□□ -1.71
UBI4YLL039C PAN2P53010 1115 aaPredicted RBP4.38□□□□□ -1.71
UBI4YLL039C TEL2P53038 688 aa4.38□□□□□ -1.71
UBI4YLL039C RCF2P53721 224 aa4.38□□□□□ -1.71
UBI4YLL039C ECM9Q02202 377 aa4.38□□□□□ -1.71
UBI4YLL039C GOT1Q03554 138 aa4.38□□□□□ -1.71
UBI4YLL039C RCF1Q03713 159 aa4.38□□□□□ -1.71
UBI4YLL039C TAF12Q03761 539 aa4.38□□□□□ -1.71
UBI4YLL039C MGR3Q04472 501 aa4.38□□□□□ -1.71
UBI4YLL039C YML096WQ04489 525 aa4.38□□□□□ -1.71
UBI4YLL039C YDL114WQ07530 308 aa4.38□□□□□ -1.71
UBI4YLL039C RTK1Q12100 620 aaPredicted RBP4.38□□□□□ -1.71
UBI4YLL039C MCD1Q12158 566 aa4.38□□□□□ -1.71
UBI4YLL039C YPL247CQ12523 523 aa4.38□□□□□ -1.71
UBI4YLL039C HEM2P05373 342 aa4.37□□□□□ -1.71
UBI4YLL039C RPL40AP0CH08 128 aaKnown RBP4.37□□□□□ -1.71
UBI4YLL039C RPL40BP0CH09 128 aaKnown RBP4.37□□□□□ -1.71
UBI4YLL039C RPL1AP0CX43 217 aaKnown RBP4.37□□□□□ -1.71
UBI4YLL039C RPL1BP0CX44 217 aaKnown RBP4.37□□□□□ -1.71
UBI4YLL039C SPS22P25380 463 aa4.37□□□□□ -1.71
UBI4YLL039C YCR090CP25654 182 aaKnown RBP4.37□□□□□ -1.71
UBI4YLL039C MKK2P32491 506 aa4.37□□□□□ -1.71
UBI4YLL039C SKT5P34226 696 aa4.37□□□□□ -1.71
UBI4YLL039C PIM1P36775 1133 aa4.37□□□□□ -1.71
UBI4YLL039C UBA4P38820 440 aa4.37□□□□□ -1.71
UBI4YLL039C NPT1P39683 429 aaKnown RBP4.37□□□□□ -1.71
UBI4YLL039C ERV46P39727 415 aa4.37□□□□□ -1.71
UBI4YLL039C YAL037WP39728 267 aa4.37□□□□□ -1.71
UBI4YLL039C MGS1P40151 587 aa4.37□□□□□ -1.71
UBI4YLL039C SSU1P41930 458 aa4.37□□□□□ -1.71
UBI4YLL039C PFA3P42836 336 aa4.37□□□□□ -1.71
UBI4YLL039C ZIM17P42844 174 aa4.37□□□□□ -1.71
UBI4YLL039C UBP6P43593 499 aaKnown RBP4.37□□□□□ -1.71
UBI4YLL039C TY4A-JP47023 414 aa4.37□□□□□ -1.71
UBI4YLL039C TIS11P47977 285 aa4.37□□□□□ -1.71
UBI4YLL039C MPS2P53159 387 aa4.37□□□□□ -1.71
UBI4YLL039C UBX4P54730 416 aa4.37□□□□□ -1.71
UBI4YLL039C RMI1Q02685 241 aa4.37□□□□□ -1.71
UBI4YLL039C LGE1Q02796 332 aaKnown RBP4.37□□□□□ -1.71
UBI4YLL039C PLP1Q04004 230 aa4.37□□□□□ -1.71
UBI4YLL039C ATG26Q06321 1198 aa4.37□□□□□ -1.71
UBI4YLL039C OSW1Q08692 278 aa4.37□□□□□ -1.71
UBI4YLL039C UIP4Q08926 304 aa4.37□□□□□ -1.71
UBI4YLL039C ATP16Q12165 160 aa4.37□□□□□ -1.71
UBI4YLL039C PST1Q12355 444 aa4.37□□□□□ -1.71
UBI4YLL039C SPE4Q12455 300 aa4.37□□□□□ -1.71
UBI4YLL039C BRR1Q99177 341 aaPredicted RBP4.37□□□□□ -1.71
UBI4YLL039C HSH49Q99181 213 aaPredicted RBP4.37□□□□□ -1.71
UBI4YLL039C MDM35O60200 86 aa4.36□□□□□ -1.71
UBI4YLL039C RPL6BP05739 176 aaKnown RBP4.36□□□□□ -1.71
UBI4YLL039C CDC21P06785 304 aa4.36□□□□□ -1.71
UBI4YLL039C RSR1P13856 272 aa4.36□□□□□ -1.71
UBI4YLL039C CNA1P23287 553 aa4.36□□□□□ -1.71
UBI4YLL039C RPS5P26783 225 aaKnown RBP4.36□□□□□ -1.71
UBI4YLL039C YKL100CP34248 587 aa4.36□□□□□ -1.71
UBI4YLL039C AST1P35183 429 aa4.36□□□□□ -1.71
UBI4YLL039C SOL2P37262 315 aa4.36□□□□□ -1.71
UBI4YLL039C TRM7P38238 310 aaKnown RBP4.36□□□□□ -1.71
UBI4YLL039C YPT35P38815 214 aaKnown RBP4.36□□□□□ -1.71
UBI4YLL039C DHH1P39517 506 aaKnown RBP4.36□□□□□ -1.71
UBI4YLL039C SPF1P39986 1215 aaKnown RBP4.36□□□□□ -1.71
UBI4YLL039C YER034WP40022 185 aaKnown RBP4.36□□□□□ -1.71
UBI4YLL039C YER137CP40083 148 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms