RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C CYC3P06182 269 aa1.61□□□□□ -2.15
RPL40BYKR094C PRP2P20095 876 aaPredicted RBP1.61□□□□□ -2.15
RPL40BYKR094C OCA4P25366 362 aa1.61□□□□□ -2.15
RPL40BYKR094C PAP1P29468 568 aaKnown RBP1.61□□□□□ -2.15
RPL40BYKR094C PXA2P34230 853 aa1.61□□□□□ -2.15
RPL40BYKR094C YCR041WP37265 110 aa1.61□□□□□ -2.15
RPL40BYKR094C ESL1P40456 1118 aa1.61□□□□□ -2.15
RPL40BYKR094C POP1P41812 875 aa1.61□□□□□ -2.15
RPL40BYKR094C VTC2P43585 828 aa1.61□□□□□ -2.15
RPL40BYKR094C DUO1P53168 247 aaKnown RBP1.61□□□□□ -2.15
RPL40BYKR094C GIR2Q03768 265 aaPredicted RBP1.61□□□□□ -2.15
RPL40BYKR094C YLR287CQ05881 355 aa1.61□□□□□ -2.15
RPL40BYKR094C MUM3Q08750 479 aa1.61□□□□□ -2.15
RPL40BYKR094C AHC1Q12433 566 aa1.61□□□□□ -2.15
RPL40BYKR094C PSK1P31374 1356 aa1.6□□□□□ -2.15
RPL40BYKR094C LEU4P06208 619 aaKnown RBP1.6□□□□□ -2.15
RPL40BYKR094C RED1P14291 827 aa1.6□□□□□ -2.15
RPL40BYKR094C EST1P17214 699 aaPredicted RBP1.6□□□□□ -2.15
RPL40BYKR094C YCK1P23291 538 aa1.6□□□□□ -2.15
RPL40BYKR094C MUM2P38236 366 aa1.6□□□□□ -2.15
RPL40BYKR094C MSR1P38714 643 aa1.6□□□□□ -2.15
RPL40BYKR094C UTP9P38882 575 aaKnown RBP1.6□□□□□ -2.15
RPL40BYKR094C MBB1P39534 108 aa1.6□□□□□ -2.15
RPL40BYKR094C MIG3P39943 394 aa1.6□□□□□ -2.15
RPL40BYKR094C YER186CP40101 306 aa1.6□□□□□ -2.15
RPL40BYKR094C UPF3P48412 387 aaKnown RBP1.6□□□□□ -2.15
RPL40BYKR094C PCP1P53259 346 aa1.6□□□□□ -2.15
RPL40BYKR094C HST1P53685 503 aa1.6□□□□□ -2.15
RPL40BYKR094C YSA1Q01976 231 aa1.6□□□□□ -2.15
RPL40BYKR094C YDR239CQ03780 787 aa1.6□□□□□ -2.15
RPL40BYKR094C SYF1Q04048 859 aaPredicted RBP1.6□□□□□ -2.15
RPL40BYKR094C MFB1Q04922 465 aa1.6□□□□□ -2.15
RPL40BYKR094C YLL032CQ07834 825 aaKnown RBP RIP-Chip data1.6□□□□□ -2.15not detected
RPL40BYKR094C CTI6Q08923 506 aa1.6□□□□□ -2.15
RPL40BYKR094C RRG1Q12167 365 aaPredicted RBP1.6□□□□□ -2.15
RPL40BYKR094C SFI1Q12369 946 aa1.6□□□□□ -2.15
RPL40BYKR094C RAV1P47104 1357 aa1.59□□□□□ -2.15
RPL40BYKR094C RPL19AP0CX82 189 aaKnown RBP1.59□□□□□ -2.15
RPL40BYKR094C RPL19BP0CX83 189 aaPredicted RBP1.59□□□□□ -2.15
RPL40BYKR094C CBS1P14066 229 aa1.59□□□□□ -2.15
RPL40BYKR094C MET8P15807 274 aa1.59□□□□□ -2.15
RPL40BYKR094C DBF4P32325 704 aa1.59□□□□□ -2.15
RPL40BYKR094C CSE2P33308 149 aa1.59□□□□□ -2.15
RPL40BYKR094C ARA1P38115 344 aa1.59□□□□□ -2.15
RPL40BYKR094C CCT6P39079 546 aa1.59□□□□□ -2.15
RPL40BYKR094C FLC2P39719 783 aa1.59□□□□□ -2.15
RPL40BYKR094C ALG5P40350 334 aa1.59□□□□□ -2.15
RPL40BYKR094C DOT5P40553 215 aa1.59□□□□□ -2.15
RPL40BYKR094C SSN8P47821 323 aa1.59□□□□□ -2.15
RPL40BYKR094C VID30P53076 958 aa1.59□□□□□ -2.15
RPL40BYKR094C YGR066CP53242 292 aa1.59□□□□□ -2.15
RPL40BYKR094C TIM10P87108 93 aa1.59□□□□□ -2.15
RPL40BYKR094C IMH1Q06704 911 aaKnown RBP1.59□□□□□ -2.15
RPL40BYKR094C SCM3Q12334 223 aa1.59□□□□□ -2.15
RPL40BYKR094C ERP4Q12450 207 aa1.59□□□□□ -2.15
RPL40BYKR094C BRR1Q99177 341 aaPredicted RBP1.59□□□□□ -2.15
RPL40BYKR094C ARG3P05150 338 aa1.58□□□□□ -2.16
RPL40BYKR094C CKA1P15790 372 aa1.58□□□□□ -2.16
RPL40BYKR094C OLE1P21147 510 aaKnown RBP1.58□□□□□ -2.16
RPL40BYKR094C REC107P21651 314 aa1.58□□□□□ -2.16
RPL40BYKR094C ITR1P30605 584 aa1.58□□□□□ -2.16
RPL40BYKR094C KAR9P32526 644 aa1.58□□□□□ -2.16
RPL40BYKR094C OTU2P38747 307 aaKnown RBP1.58□□□□□ -2.16
RPL40BYKR094C DFG10P40526 253 aa1.58□□□□□ -2.16
RPL40BYKR094C PFS2P42841 465 aaKnown RBP1.58□□□□□ -2.16
RPL40BYKR094C IRC6P43615 237 aa1.58□□□□□ -2.16
RPL40BYKR094C URB2P47108 1174 aa1.58□□□□□ -2.16
RPL40BYKR094C MRX6P48564 524 aa1.58□□□□□ -2.16
RPL40BYKR094C IMD4P50094 524 aaKnown RBP1.58□□□□□ -2.16
RPL40BYKR094C VPS75P53853 264 aa1.58□□□□□ -2.16
RPL40BYKR094C AIM32Q04689 311 aa1.58□□□□□ -2.16
RPL40BYKR094C RIM20Q12033 661 aa1.58□□□□□ -2.16
RPL40BYKR094C NMD4Q12129 218 aa1.58□□□□□ -2.16
RPL40BYKR094C MET17P06106 444 aa1.57□□□□□ -2.16
RPL40BYKR094C DFR1P07807 211 aaKnown RBP RIP-Chip data1.57□□□□□ -2.16not detected
RPL40BYKR094C SLY1P22213 666 aa1.57□□□□□ -2.16
RPL40BYKR094C CLB3P24870 427 aa1.57□□□□□ -2.16
RPL40BYKR094C TIP1P27654 210 aaPredicted RBP1.57□□□□□ -2.16
RPL40BYKR094C PEX5P35056 612 aa1.57□□□□□ -2.16
RPL40BYKR094C BYE1P36106 594 aa1.57□□□□□ -2.16
RPL40BYKR094C SPO22P40511 975 aa1.57□□□□□ -2.16
RPL40BYKR094C ARE2P53629 642 aaKnown RBP1.57□□□□□ -2.16
RPL40BYKR094C NGL3Q03210 505 aa1.57□□□□□ -2.16
RPL40BYKR094C SXM1Q04175 944 aaKnown RBP1.57□□□□□ -2.16
RPL40BYKR094C TAF11Q04226 346 aa1.57□□□□□ -2.16
RPL40BYKR094C VPS38Q05919 439 aa1.57□□□□□ -2.16
RPL40BYKR094C YEH1Q07804 573 aa1.57□□□□□ -2.16
RPL40BYKR094C SNX3Q08826 162 aaKnown RBP1.57□□□□□ -2.16
RPL40BYKR094C PLP2Q12017 286 aa1.57□□□□□ -2.16
RPL40BYKR094C ISA2Q12425 185 aa1.57□□□□□ -2.16
RPL40BYKR094C RRD2Q12461 358 aa1.57□□□□□ -2.16
RPL40BYKR094C YJR112W-AQ3E743 109 aa1.57□□□□□ -2.16
RPL40BYKR094C YML133CQ03099 1374 aa1.57□□□□□ -2.16
RPL40BYKR094C YLL067CQ07888 1374 aa1.57□□□□□ -2.16
RPL40BYKR094C YLL066CQ99208 1374 aa1.57□□□□□ -2.16
RPL40BYKR094C GAL80P04387 435 aa1.56□□□□□ -2.16
RPL40BYKR094C BLI1P35727 113 aa1.56□□□□□ -2.16
RPL40BYKR094C CST26P38226 397 aa1.56□□□□□ -2.16
RPL40BYKR094C SRP72P38688 640 aaKnown RBP1.56□□□□□ -2.16
RPL40BYKR094C YMR147WP40218 223 aaKnown RBP1.56□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 32.9 ms