RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP16	YKR086W	AAP1	P37898	856 aa	Known RBP	0.96	□□□□□ -2.26
PRP16	YKR086W	PSD1	P39006	500 aa		0.96	□□□□□ -2.26
PRP16	YKR086W	PHO90	P39535	881 aa		0.96	□□□□□ -2.26
PRP16	YKR086W	ECM10	P39987	644 aa		0.96	□□□□□ -2.26
PRP16	YKR086W	NCA3	P46955	337 aa		0.96	□□□□□ -2.26
PRP16	YKR086W	DSD1	P53095	428 aa		0.96	□□□□□ -2.26
PRP16	YKR086W	YIF1	P53845	314 aa	Known RBP	0.96	□□□□□ -2.26
PRP16	YKR086W	RPL6A	Q02326	176 aa	Known RBP	0.96	□□□□□ -2.26
PRP16	YKR086W	RBA50	Q04418	439 aa		0.96	□□□□□ -2.26
PRP16	YKR086W	IVY1	Q04934	453 aa		0.96	□□□□□ -2.26
PRP16	YKR086W	VAC14	Q06708	880 aa		0.96	□□□□□ -2.26
PRP16	YKR086W	SSP2	Q08646	371 aa		0.96	□□□□□ -2.26
PRP16	YKR086W	RBD2	Q12270	262 aa		0.96	□□□□□ -2.26
PRP16	YKR086W	MED1	Q12321	566 aa		0.96	□□□□□ -2.26
PRP16	YKR086W	VCX1	Q99385	411 aa		0.96	□□□□□ -2.26
PRP16	YKR086W	VMA8	P32610	256 aa	Known RBP	0.96	□□□□□ -2.26
PRP16	YKR086W	MYO3	P36006	1272 aa		0.96	□□□□□ -2.26
PRP16	YKR086W	DOA1	P36037	715 aa		0.96	□□□□□ -2.26
PRP16	YKR086W	RKM3	P38222	552 aa		0.96	□□□□□ -2.26
PRP16	YKR086W	LAG1	P38703	411 aa		0.96	□□□□□ -2.26
PRP16	YKR086W	CIN4	P39110	191 aa		0.96	□□□□□ -2.26
PRP16	YKR086W	CTK2	P46962	323 aa		0.96	□□□□□ -2.26
PRP16	YKR086W	CTF18	P49956	741 aa		0.96	□□□□□ -2.26
PRP16	YKR086W	NUP84	P52891	726 aa		0.96	□□□□□ -2.26
PRP16	YKR086W	SOL4	P53315	255 aa		0.96	□□□□□ -2.26
PRP16	YKR086W	EOS1	P53938	366 aa		0.96	□□□□□ -2.26
PRP16	YKR086W	CTL1	Q03220	320 aa	Known RBP	0.96	□□□□□ -2.26
PRP16	YKR086W	RCF1	Q03713	159 aa		0.96	□□□□□ -2.26
PRP16	YKR086W	YDR131C	Q03899	556 aa		0.96	□□□□□ -2.26
PRP16	YKR086W	MFB1	Q04922	465 aa		0.96	□□□□□ -2.26
PRP16	YKR086W	RRP42	Q12277	265 aa	Predicted RBP	0.96	□□□□□ -2.26
PRP16	YKR086W	RGS2	Q99188	309 aa		0.96	□□□□□ -2.26
PRP16	YKR086W	FLO11	P08640	1367 aa		0.96	□□□□□ -2.26
PRP16	YKR086W	GLN3	P18494	730 aa		0.96	□□□□□ -2.26
PRP16	YKR086W	SAN1	P22470	610 aa		0.96	□□□□□ -2.26
PRP16	YKR086W	RPI1	P23250	407 aa	Known RBP	0.96	□□□□□ -2.26
PRP16	YKR086W	MDL1	P33310	695 aa		0.96	□□□□□ -2.26
PRP16	YKR086W	PHD1	P36093	366 aa		0.96	□□□□□ -2.26
PRP16	YKR086W	AUR1	P36107	401 aa	Predicted RBP	0.96	□□□□□ -2.26
PRP16	YKR086W	AVT5	P38176	459 aa		0.96	□□□□□ -2.26
PRP16	YKR086W	ERG7	P38604	731 aa		0.96	□□□□□ -2.26
PRP16	YKR086W	YIL060W	P40519	144 aa		0.96	□□□□□ -2.26
PRP16	YKR086W	IAH1	P41734	238 aa		0.96	□□□□□ -2.26
PRP16	YKR086W	IKS1	P47042	667 aa		0.96	□□□□□ -2.26
PRP16	YKR086W	IMD4	P50094	524 aa	Known RBP	0.96	□□□□□ -2.26
PRP16	YKR086W	VPS4	P52917	437 aa		0.96	□□□□□ -2.26
PRP16	YKR086W	STR3	P53101	465 aa	Known RBP	0.96	□□□□□ -2.26
PRP16	YKR086W	YMR087W	Q04299	284 aa		0.96	□□□□□ -2.26
PRP16	YKR086W	AFI1	Q99222	893 aa		0.96	□□□□□ -2.26
PRP16	YKR086W	SAC3	P46674	1301 aa		0.95	□□□□□ -2.26
PRP16	YKR086W	ASP3-2	P0CX77	362 aa		0.95	□□□□□ -2.26
PRP16	YKR086W	ASP3-3	P0CX78	362 aa		0.95	□□□□□ -2.26
PRP16	YKR086W	ASP3-4	P0CX79	362 aa		0.95	□□□□□ -2.26
PRP16	YKR086W	ASP3-1	P0CZ17	362 aa		0.95	□□□□□ -2.26
PRP16	YKR086W	CPR1	P14832	162 aa	Known RBP	0.95	□□□□□ -2.26
PRP16	YKR086W	EXO70	P19658	623 aa		0.95	□□□□□ -2.26
PRP16	YKR086W	APE2	P32454	952 aa	Known RBP	0.95	□□□□□ -2.26
PRP16	YKR086W	RAD24	P32641	659 aa		0.95	□□□□□ -2.26
PRP16	YKR086W	GDT1	P38301	280 aa	Predicted RBP	0.95	□□□□□ -2.26
PRP16	YKR086W	YBP1	P38315	674 aa		0.95	□□□□□ -2.26
PRP16	YKR086W	NDT80	P38830	627 aa		0.95	□□□□□ -2.26
PRP16	YKR086W	YHR182W	P38870	785 aa		0.95	□□□□□ -2.26
PRP16	YKR086W	LIA1	P47120	325 aa	Known RBP	0.95	□□□□□ -2.26
PRP16	YKR086W	OCA1	P50946	238 aa	Predicted RBP	0.95	□□□□□ -2.26
PRP16	YKR086W	PYK2	P52489	506 aa	Known RBP	0.95	□□□□□ -2.26
PRP16	YKR086W	CGR1	P53188	120 aa		0.95	□□□□□ -2.26
PRP16	YKR086W	PRM1	P53835	661 aa		0.95	□□□□□ -2.26
PRP16	YKR086W	GIR2	Q03768	265 aa	Predicted RBP	0.95	□□□□□ -2.26
PRP16	YKR086W	OPY2	Q06810	360 aa		0.95	□□□□□ -2.26
PRP16	YKR086W	SIL1	Q08199	421 aa		0.95	□□□□□ -2.26
PRP16	YKR086W	THP1	Q08231	455 aa		0.95	□□□□□ -2.26
PRP16	YKR086W	RPS10A	Q08745	105 aa	Predicted RBP	0.95	□□□□□ -2.26
PRP16	YKR086W	SLF1	Q12034	447 aa	Known RBP	0.95	□□□□□ -2.26
PRP16	YKR086W	NCE102	Q12207	173 aa	RIP-Chip data	0.95	□□□□□ -2.26	not detected
PRP16	YKR086W	MEX67	Q99257	599 aa	Known RBP	0.95	□□□□□ -2.26
PRP16	YKR086W	FAB1	P34756	2278 aa		0.95	□□□□□ -2.26
PRP16	YKR086W	MTF1	P14908	341 aa	Known RBP	0.95	□□□□□ -2.26
PRP16	YKR086W	AAC3	P18238	307 aa		0.95	□□□□□ -2.26
PRP16	YKR086W	YCK1	P23291	538 aa		0.95	□□□□□ -2.26
PRP16	YKR086W	PHO84	P25297	587 aa	Known RBP	0.95	□□□□□ -2.26
PRP16	YKR086W	TIF3	P34167	436 aa	Known RBP	0.95	□□□□□ -2.26
PRP16	YKR086W	RIM2	P38127	377 aa		0.95	□□□□□ -2.26
PRP16	YKR086W	DED81	P38707	554 aa	Known RBP	0.95	□□□□□ -2.26
PRP16	YKR086W	UTP9	P38882	575 aa	Known RBP	0.95	□□□□□ -2.26
PRP16	YKR086W	YHR218W	P38899	603 aa		0.95	□□□□□ -2.26
PRP16	YKR086W	YER010C	P40011	234 aa		0.95	□□□□□ -2.26
PRP16	YKR086W	RTR1	P40084	226 aa	Predicted RBP	0.95	□□□□□ -2.26
PRP16	YKR086W	MMF1	P40185	145 aa	Known RBP	0.95	□□□□□ -2.26
PRP16	YKR086W	DPH1	P40487	425 aa	Known RBP	0.95	□□□□□ -2.26
PRP16	YKR086W	DFG10	P40526	253 aa		0.95	□□□□□ -2.26
PRP16	YKR086W	RTS2	P40962	232 aa		0.95	□□□□□ -2.26
PRP16	YKR086W	YDL186W	P48568	277 aa		0.95	□□□□□ -2.26
PRP16	YKR086W	MEH1	Q02205	184 aa		0.95	□□□□□ -2.26
PRP16	YKR086W	YMR178W	Q03219	274 aa	Known RBP	0.95	□□□□□ -2.26
PRP16	YKR086W	RIX7	Q07844	837 aa	Known RBP	0.95	□□□□□ -2.26
PRP16	YKR086W	PSK2	Q08217	1101 aa		0.95	□□□□□ -2.26
PRP16	YKR086W	ARD1	P07347	238 aa	Predicted RBP	0.94	□□□□□ -2.26
PRP16	YKR086W	RPC40	P07703	335 aa	Known RBP	0.94	□□□□□ -2.26
PRP16	YKR086W	CDC16	P09798	840 aa		0.94	□□□□□ -2.26
PRP16	YKR086W	CBS1	P14066	229 aa		0.94	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 215.4 ms