RNA–Protein interactions for RNA: YKL197C

PEX1, Transcript of AAA-peroxin, yeast

Gene PEX1, Length 3,132 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX1	YKL197C	CRF1	Q04930	467 aa		3.35	□□□□□ -1.87
PEX1	YKL197C	YPL066W	Q12194	479 aa		3.35	□□□□□ -1.87
PEX1	YKL197C	DCN1	Q12395	269 aa		3.35	□□□□□ -1.87
PEX1	YKL197C	GRX6	Q12438	231 aa		3.35	□□□□□ -1.87
PEX1	YKL197C	Q0144	Q9ZZW2	109 aa		3.35	□□□□□ -1.87
PEX1	YKL197C	RPL25	P04456	142 aa	Known RBP	3.34	□□□□□ -1.87
PEX1	YKL197C	CHO2	P05374	869 aa	Known RBP	3.34	□□□□□ -1.87
PEX1	YKL197C	RPL4A	P10664	362 aa	Known RBP	3.34	□□□□□ -1.87
PEX1	YKL197C	PRI2	P20457	528 aa		3.34	□□□□□ -1.87
PEX1	YKL197C	HXT2	P23585	541 aa		3.34	□□□□□ -1.87
PEX1	YKL197C	UBC8	P28263	218 aa		3.34	□□□□□ -1.87
PEX1	YKL197C	LAC1	P28496	418 aa		3.34	□□□□□ -1.87
PEX1	YKL197C	HOG1	P32485	435 aa		3.34	□□□□□ -1.87
PEX1	YKL197C	ECM25	P32525	599 aa		3.34	□□□□□ -1.87
PEX1	YKL197C	GCG1	P32656	232 aa	Known RBP	3.34	□□□□□ -1.87
PEX1	YKL197C	CDC13	P32797	924 aa	Known RBP	3.34	□□□□□ -1.87
PEX1	YKL197C	RFS1	P38234	210 aa	Known RBP	3.34	□□□□□ -1.87
PEX1	YKL197C	CCT4	P39078	528 aa	Known RBP	3.34	□□□□□ -1.87
PEX1	YKL197C	VMA13	P41807	478 aa	Known RBP	3.34	□□□□□ -1.87
PEX1	YKL197C	MRPS18	P42847	217 aa		3.34	□□□□□ -1.87
PEX1	YKL197C	IRC5	P43610	853 aa		3.34	□□□□□ -1.87
PEX1	YKL197C	RPL4B	P49626	362 aa	Known RBP	3.34	□□□□□ -1.87
PEX1	YKL197C	PSP1	P50896	841 aa	Known RBP	3.34	□□□□□ -1.87
PEX1	YKL197C	NBP1	P52919	319 aa	Predicted RBP	3.34	□□□□□ -1.87
PEX1	YKL197C	SOK2	P53438	785 aa	Predicted RBP	3.34	□□□□□ -1.87
PEX1	YKL197C	GPD1	Q00055	391 aa	Known RBP	3.34	□□□□□ -1.87
PEX1	YKL197C	CTF19	Q02732	369 aa		3.34	□□□□□ -1.87
PEX1	YKL197C	NAN1	Q02931	896 aa	Known RBP	3.34	□□□□□ -1.87
PEX1	YKL197C	YMR210W	Q03649	449 aa		3.34	□□□□□ -1.87
PEX1	YKL197C	SOV1	Q04748	898 aa		3.34	□□□□□ -1.87
PEX1	YKL197C	YOR114W	Q12219	294 aa		3.34	□□□□□ -1.87
PEX1	YKL197C	RRP42	Q12277	265 aa	Predicted RBP	3.34	□□□□□ -1.87
PEX1	YKL197C	MRPL23	Q12487	163 aa	Predicted RBP	3.34	□□□□□ -1.87
PEX1	YKL197C	YOL159C-A	Q3E769	90 aa		3.34	□□□□□ -1.87
PEX1	YKL197C	AUS1	Q08409	1394 aa		3.34	□□□□□ -1.87
PEX1	YKL197C	PRC1	P00729	532 aa		3.34	□□□□□ -1.88
PEX1	YKL197C	RNR2	P09938	399 aa	Known RBP	3.34	□□□□□ -1.88
PEX1	YKL197C	MAS1	P10507	462 aa		3.34	□□□□□ -1.88
PEX1	YKL197C	ERS1	P17261	260 aa		3.34	□□□□□ -1.88
PEX1	YKL197C	PMT2	P31382	759 aa		3.34	□□□□□ -1.88
PEX1	YKL197C	RPS1A	P33442	255 aa	Known RBP	3.34	□□□□□ -1.88
PEX1	YKL197C	GCS1	P35197	352 aa		3.34	□□□□□ -1.88
PEX1	YKL197C	SNU114	P36048	1008 aa	Known RBP	3.34	□□□□□ -1.88
PEX1	YKL197C	YBR259W	P38338	688 aa		3.34	□□□□□ -1.88
PEX1	YKL197C	STB5	P38699	743 aa		3.34	□□□□□ -1.88
PEX1	YKL197C	BZZ1	P38822	633 aa		3.34	□□□□□ -1.88
PEX1	YKL197C	RPS26A	P39938	119 aa	Known RBP	3.34	□□□□□ -1.88
PEX1	YKL197C	RPS26B	P39939	119 aa	Known RBP	3.34	□□□□□ -1.88
PEX1	YKL197C	RPN3	P40016	523 aa	Known RBP	3.34	□□□□□ -1.88
PEX1	YKL197C	FAU1	P40099	211 aa		3.34	□□□□□ -1.88
PEX1	YKL197C	CSM2	P40465	213 aa		3.34	□□□□□ -1.88
PEX1	YKL197C	PAC11	P40960	533 aa		3.34	□□□□□ -1.88
PEX1	YKL197C	CIN1	P40987	1014 aa		3.34	□□□□□ -1.88
PEX1	YKL197C	AGP3	P43548	558 aa		3.34	□□□□□ -1.88
PEX1	YKL197C	EMC2	P47133	292 aa	Known RBP	3.34	□□□□□ -1.88
PEX1	YKL197C	YGR125W	P53273	1036 aa		3.34	□□□□□ -1.88
PEX1	YKL197C	CUS2	P53830	285 aa	Predicted RBP	3.34	□□□□□ -1.88
PEX1	YKL197C	CWC27	Q02770	301 aa		3.34	□□□□□ -1.88
PEX1	YKL197C	YDR249C	Q03787	373 aa		3.34	□□□□□ -1.88
PEX1	YKL197C	NEJ1	Q06148	342 aa		3.34	□□□□□ -1.88
PEX1	YKL197C	CUR1	Q06469	252 aa		3.34	□□□□□ -1.88
PEX1	YKL197C	THI22	Q06490	572 aa		3.34	□□□□□ -1.88
PEX1	YKL197C	YLR413W	Q06689	675 aa		3.34	□□□□□ -1.88
PEX1	YKL197C	YPR078C	Q06813	372 aa		3.34	□□□□□ -1.88
PEX1	YKL197C	LDB18	Q07887	179 aa		3.34	□□□□□ -1.88
PEX1	YKL197C	INP54	Q08227	384 aa	Known RBP	3.34	□□□□□ -1.88
PEX1	YKL197C	NBA1	Q08229	501 aa	Known RBP	3.34	□□□□□ -1.88
PEX1	YKL197C	BAG7	Q12128	409 aa		3.34	□□□□□ -1.88
PEX1	YKL197C	ATG34	Q12292	412 aa		3.34	□□□□□ -1.88
PEX1	YKL197C	RTN2	Q12443	393 aa		3.34	□□□□□ -1.88
PEX1	YKL197C	TUB1	P09733	447 aa	Known RBP	3.33	□□□□□ -1.88
PEX1	YKL197C	URA6	P15700	204 aa		3.33	□□□□□ -1.88
PEX1	YKL197C	SRV2	P17555	526 aa	Known RBP	3.33	□□□□□ -1.88
PEX1	YKL197C	RNA15	P25299	296 aa	Predicted RBP	3.33	□□□□□ -1.88
PEX1	YKL197C	GSP1	P32835	219 aa	Known RBP	3.33	□□□□□ -1.88
PEX1	YKL197C	GSP2	P32836	220 aa	Known RBP	3.33	□□□□□ -1.88
PEX1	YKL197C	VAM7	P32912	316 aa		3.33	□□□□□ -1.88
PEX1	YKL197C	YKL077W	P36081	392 aa		3.33	□□□□□ -1.88
PEX1	YKL197C	FIG1	P38224	298 aa		3.33	□□□□□ -1.88
PEX1	YKL197C	EFM1	P38732	585 aa		3.33	□□□□□ -1.88
PEX1	YKL197C	MUP3	P38734	546 aa		3.33	□□□□□ -1.88
PEX1	YKL197C	YEL068C	P39977	110 aa		3.33	□□□□□ -1.88
PEX1	YKL197C	MGS1	P40151	587 aa		3.33	□□□□□ -1.88
PEX1	YKL197C	RFC2	P40348	353 aa		3.33	□□□□□ -1.88
PEX1	YKL197C	UBP6	P43593	499 aa	Known RBP	3.33	□□□□□ -1.88
PEX1	YKL197C	ALK1	P43633	760 aa	Known RBP	3.33	□□□□□ -1.88
PEX1	YKL197C	YAR1	P46683	200 aa		3.33	□□□□□ -1.88
PEX1	YKL197C	YJR030C	P47101	745 aa		3.33	□□□□□ -1.88
PEX1	YKL197C	YGL204C	P53089	101 aa		3.33	□□□□□ -1.88
PEX1	YKL197C	YGL036W	P53185	909 aa	Predicted RBP	3.33	□□□□□ -1.88
PEX1	YKL197C	FMP48	P53233	369 aa		3.33	□□□□□ -1.88
PEX1	YKL197C	YNR014W	P53719	212 aa		3.33	□□□□□ -1.88
PEX1	YKL197C	SDH1	Q00711	640 aa		3.33	□□□□□ -1.88
PEX1	YKL197C	PRP38	Q00723	242 aa	Predicted RBP	3.33	□□□□□ -1.88
PEX1	YKL197C	YMR027W	Q04371	470 aa		3.33	□□□□□ -1.88
PEX1	YKL197C	CDC123	Q05791	360 aa		3.33	□□□□□ -1.88
PEX1	YKL197C	CTS2	Q06350	511 aa		3.33	□□□□□ -1.88
PEX1	YKL197C	SSK1	Q07084	712 aa		3.33	□□□□□ -1.88
PEX1	YKL197C	MFG1	Q07684	458 aa		3.33	□□□□□ -1.88
PEX1	YKL197C	GSH2	Q08220	491 aa		3.33	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms