RNA–Protein interactions for RNA: YKL110C

KTI12, Transcript of Protein that plays a role in modification of tRNA wobble nucleosides, yeast

Gene KTI12, Length 942 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KTI12	YKL110C	UPF3	P48412	387 aa	Known RBP	4.92	□□□□□ -1.62
KTI12	YKL110C	PYK2	P52489	506 aa	Known RBP	4.92	□□□□□ -1.62
KTI12	YKL110C	MET31	Q03081	177 aa		4.92	□□□□□ -1.62
KTI12	YKL110C	NSE5	Q03718	556 aa		4.92	□□□□□ -1.62
KTI12	YKL110C	PPN1	Q04119	674 aa		4.92	□□□□□ -1.62
KTI12	YKL110C	RPC11	Q04307	110 aa	Predicted RBP	4.92	□□□□□ -1.62
KTI12	YKL110C	EMI1	Q04406	187 aa		4.92	□□□□□ -1.62
KTI12	YKL110C	VTA1	Q06263	330 aa		4.92	□□□□□ -1.62
KTI12	YKL110C	ULA1	Q12059	462 aa		4.92	□□□□□ -1.62
KTI12	YKL110C	MLH3	Q12083	715 aa		4.92	□□□□□ -1.62
KTI12	YKL110C	YPL245W	Q12179	454 aa	Known RBP	4.92	□□□□□ -1.62
KTI12	YKL110C	DBP10	Q12389	995 aa	Known RBP	4.92	□□□□□ -1.62
KTI12	YKL110C	RHO1	P06780	209 aa	Known RBP	4.91	□□□□□ -1.62
KTI12	YKL110C	STE3	P06783	470 aa		4.91	□□□□□ -1.62
KTI12	YKL110C	COR1	P07256	457 aa		4.91	□□□□□ -1.62
KTI12	YKL110C	RAP1	P11938	827 aa		4.91	□□□□□ -1.62
KTI12	YKL110C	MRP13	P12686	339 aa		4.91	□□□□□ -1.62
KTI12	YKL110C	CLN2	P20438	545 aa		4.91	□□□□□ -1.62
KTI12	YKL110C	EPT1	P22140	391 aa		4.91	□□□□□ -1.62
KTI12	YKL110C	POL4	P25615	582 aa		4.91	□□□□□ -1.62
KTI12	YKL110C	RFA2	P26754	273 aa	Known RBP	4.91	□□□□□ -1.62
KTI12	YKL110C	PTP2	P29461	750 aa		4.91	□□□□□ -1.62
KTI12	YKL110C	CRM1	P30822	1084 aa	Known RBP	4.91	□□□□□ -1.62
KTI12	YKL110C	SYN8	P31377	255 aa		4.91	□□□□□ -1.62
KTI12	YKL110C	CDC3	P32457	520 aa	Known RBP	4.91	□□□□□ -1.62
KTI12	YKL110C	COX13	P32799	129 aa		4.91	□□□□□ -1.62
KTI12	YKL110C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
KTI12	YKL110C	PMT1	P33775	817 aa		4.91	□□□□□ -1.62
KTI12	YKL110C	EMC3	P36039	253 aa		4.91	□□□□□ -1.62
KTI12	YKL110C	YBR241C	P38142	488 aa		4.91	□□□□□ -1.62
KTI12	YKL110C	BMT2	P38278	337 aa		4.91	□□□□□ -1.62
KTI12	YKL110C	MED6	P38782	295 aa		4.91	□□□□□ -1.62
KTI12	YKL110C	UBA4	P38820	440 aa		4.91	□□□□□ -1.62
KTI12	YKL110C	YER034W	P40022	185 aa	Known RBP	4.91	□□□□□ -1.62
KTI12	YKL110C	AYR1	P40471	297 aa		4.91	□□□□□ -1.62
KTI12	YKL110C	SER33	P40510	469 aa		4.91	□□□□□ -1.62
KTI12	YKL110C	MPH1	P40562	993 aa		4.91	□□□□□ -1.62
KTI12	YKL110C	MTR3	P48240	250 aa	Predicted RBP	4.91	□□□□□ -1.62
KTI12	YKL110C	RMR1	P53060	241 aa		4.91	□□□□□ -1.62
KTI12	YKL110C	FLC3	P53121	802 aa		4.91	□□□□□ -1.62
KTI12	YKL110C	YGL108C	P53139	140 aa		4.91	□□□□□ -1.62
KTI12	YKL110C	COG7	P53195	279 aa		4.91	□□□□□ -1.62
KTI12	YKL110C	SWC4	P53201	476 aa		4.91	□□□□□ -1.62
KTI12	YKL110C	YGR015C	P53208	328 aa		4.91	□□□□□ -1.62
KTI12	YKL110C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
KTI12	YKL110C	EFR3	Q03653	782 aa	Known RBP	4.91	□□□□□ -1.62
KTI12	YKL110C	YMR010W	Q03687	405 aa		4.91	□□□□□ -1.62
KTI12	YKL110C	ROT1	Q03691	256 aa		4.91	□□□□□ -1.62
KTI12	YKL110C	YDR239C	Q03780	787 aa		4.91	□□□□□ -1.62
KTI12	YKL110C	YDR179W-A	Q03983	463 aa		4.91	□□□□□ -1.62
KTI12	YKL110C	ECM11	Q04110	302 aa		4.91	□□□□□ -1.62
KTI12	YKL110C	BCH1	Q05029	724 aa		4.91	□□□□□ -1.62
KTI12	YKL110C	GPI11	Q06636	219 aa		4.91	□□□□□ -1.62
KTI12	YKL110C	CLP1	Q08685	445 aa	Predicted RBP	4.91	□□□□□ -1.62
KTI12	YKL110C	GET4	Q12125	312 aa		4.91	□□□□□ -1.62
KTI12	YKL110C	NTO1	Q12311	748 aa		4.91	□□□□□ -1.62
KTI12	YKL110C	GTT2	Q12390	233 aa		4.91	□□□□□ -1.62
KTI12	YKL110C	SNF8	Q12483	233 aa		4.91	□□□□□ -1.62
KTI12	YKL110C	KAR1	P11927	433 aa		4.9	□□□□□ -1.63
KTI12	YKL110C	FPR1	P20081	114 aa	Known RBP	4.9	□□□□□ -1.63
KTI12	YKL110C	ERG6	P25087	383 aa	Known RBP	4.9	□□□□□ -1.63
KTI12	YKL110C	CTR86	P25355	563 aa		4.9	□□□□□ -1.63
KTI12	YKL110C	TIF3	P34167	436 aa	Known RBP	4.9	□□□□□ -1.63
KTI12	YKL110C	PXA2	P34230	853 aa		4.9	□□□□□ -1.63
KTI12	YKL110C	SPC42	P36094	363 aa		4.9	□□□□□ -1.63
KTI12	YKL110C	GMH1	P36125	273 aa		4.9	□□□□□ -1.63
KTI12	YKL110C	IML3	P38265	245 aa		4.9	□□□□□ -1.63
KTI12	YKL110C	YBR285W	P38354	144 aa		4.9	□□□□□ -1.63
KTI12	YKL110C	ATG7	P38862	630 aa		4.9	□□□□□ -1.63
KTI12	YKL110C	AZF1	P41696	914 aa		4.9	□□□□□ -1.63
KTI12	YKL110C	GAB1	P41733	394 aa		4.9	□□□□□ -1.63
KTI12	YKL110C	ELP2	P42935	788 aa		4.9	□□□□□ -1.63
KTI12	YKL110C	YFR020W	P43600	232 aa		4.9	□□□□□ -1.63
KTI12	YKL110C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
KTI12	YKL110C	NNF1	P47149	201 aa		4.9	□□□□□ -1.63
KTI12	YKL110C	VMA10	P48836	114 aa	Known RBP	4.9	□□□□□ -1.63
KTI12	YKL110C	HNT2	P49775	206 aa		4.9	□□□□□ -1.63
KTI12	YKL110C	MPS2	P53159	387 aa		4.9	□□□□□ -1.63
KTI12	YKL110C	NOG1	Q02892	647 aa	Known RBP	4.9	□□□□□ -1.63
KTI12	YKL110C	YMR099C	Q03161	297 aa	Known RBP	4.9	□□□□□ -1.63
KTI12	YKL110C	YHM2	Q04013	314 aa		4.9	□□□□□ -1.63
KTI12	YKL110C	LOT6	Q07923	191 aa		4.9	□□□□□ -1.63
KTI12	YKL110C	TGL5	Q12043	749 aa		4.9	□□□□□ -1.63
KTI12	YKL110C	RGT2	Q12300	763 aa		4.9	□□□□□ -1.63
KTI12	YKL110C	YDR034W-B	Q6Q5X2	51 aa		4.9	□□□□□ -1.63
KTI12	YKL110C	THP2	O13539	261 aa	Known RBP	4.89	□□□□□ -1.63
KTI12	YKL110C	TIM9	O74700	87 aa		4.89	□□□□□ -1.63
KTI12	YKL110C	RAS2	P01120	322 aa	Known RBP	4.89	□□□□□ -1.63
KTI12	YKL110C	CPA1	P07258	411 aa	Known RBP	4.89	□□□□□ -1.63
KTI12	YKL110C	DAP2	P18962	818 aa		4.89	□□□□□ -1.63
KTI12	YKL110C	PRI2	P20457	528 aa		4.89	□□□□□ -1.63
KTI12	YKL110C	CMK2	P22517	447 aa		4.89	□□□□□ -1.63
KTI12	YKL110C	YSR3	P23501	404 aa		4.89	□□□□□ -1.63
KTI12	YKL110C	PUP3	P25451	205 aa	Known RBP	4.89	□□□□□ -1.63
KTI12	YKL110C	RPL5	P26321	297 aa	Known RBP	4.89	□□□□□ -1.63
KTI12	YKL110C	UBC8	P28263	218 aa		4.89	□□□□□ -1.63
KTI12	YKL110C	NTG1	P31378	399 aa		4.89	□□□□□ -1.63
KTI12	YKL110C	AAR2	P32357	355 aa	Predicted RBP	4.89	□□□□□ -1.63
KTI12	YKL110C	SAC1	P32368	623 aa	Known RBP	4.89	□□□□□ -1.63
KTI12	YKL110C	YKL097C	P34245	136 aa		4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms