RNA–Protein interactions for RNA: YJR140C

HIR3, Transcript of Subunit of the HIR complex, yeastyeast

Gene HIR3, Length 4,947 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIR3YJR140C VPS45P38932 577 aa1.68□□□□□ -2.14
HIR3YJR140C YMR147WP40218 223 aaKnown RBP1.68□□□□□ -2.14
HIR3YJR140C YPL107WQ02873 248 aa1.68□□□□□ -2.14
HIR3YJR140C RIM13Q03792 727 aa1.68□□□□□ -2.14
HIR3YJR140C THI20Q08224 551 aa1.68□□□□□ -2.14
HIR3YJR140C FRE6Q12473 712 aa1.68□□□□□ -2.14
HIR3YJR140C GCD2P12754 651 aaPredicted RBP1.68□□□□□ -2.14
HIR3YJR140C AIM17P23180 465 aaKnown RBP1.68□□□□□ -2.14
HIR3YJR140C RPI1P23250 407 aaKnown RBP1.68□□□□□ -2.14
HIR3YJR140C RHB1P25378 209 aa1.68□□□□□ -2.14
HIR3YJR140C YIM1P28625 365 aa1.68□□□□□ -2.14
HIR3YJR140C SMY1P32364 656 aaKnown RBP1.68□□□□□ -2.14
HIR3YJR140C DOA1P36037 715 aa1.68□□□□□ -2.14
HIR3YJR140C VPS41P38959 992 aa1.68□□□□□ -2.14
HIR3YJR140C YAL037WP39728 267 aa1.68□□□□□ -2.14
HIR3YJR140C GAT2P40209 560 aa1.68□□□□□ -2.14
HIR3YJR140C ALG8P40351 577 aa1.68□□□□□ -2.14
HIR3YJR140C TOF1P53840 1238 aa1.68□□□□□ -2.14
HIR3YJR140C PDR16P53860 351 aaKnown RBP1.68□□□□□ -2.14
HIR3YJR140C IBD2P53892 351 aa1.68□□□□□ -2.14
HIR3YJR140C EGD1Q02642 157 aaKnown RBP1.68□□□□□ -2.14
HIR3YJR140C RSC9Q03124 581 aa1.68□□□□□ -2.14
HIR3YJR140C PRM6Q04705 352 aa1.68□□□□□ -2.14
HIR3YJR140C SKI7Q08491 747 aaPredicted RBP1.68□□□□□ -2.14
HIR3YJR140C DSE3Q08729 430 aa1.68□□□□□ -2.14
HIR3YJR140C KEL3Q08979 651 aaPredicted RBP1.68□□□□□ -2.14
HIR3YJR140C MTF1P14908 341 aaKnown RBP1.68□□□□□ -2.14
HIR3YJR140C TAL1P15019 335 aaKnown RBP1.68□□□□□ -2.14
HIR3YJR140C THR4P16120 514 aaKnown RBP1.68□□□□□ -2.14
HIR3YJR140C FUN19P28003 413 aaPredicted RBP1.68□□□□□ -2.14
HIR3YJR140C MMF1P40185 145 aaKnown RBP1.68□□□□□ -2.14
HIR3YJR140C YIL024CP40543 189 aa1.68□□□□□ -2.14
HIR3YJR140C LAM5P43560 674 aa1.68□□□□□ -2.14
HIR3YJR140C LOH1P47055 219 aa1.68□□□□□ -2.14
HIR3YJR140C RTT102P53330 157 aa1.68□□□□□ -2.14
HIR3YJR140C COQ9Q05779 260 aa1.68□□□□□ -2.14
HIR3YJR140C DBP9Q06218 594 aaKnown RBP1.68□□□□□ -2.14
HIR3YJR140C YAP7Q08182 245 aa1.68□□□□□ -2.14
HIR3YJR140C ADE4P04046 510 aaKnown RBP1.67□□□□□ -2.14
HIR3YJR140C SUP35P05453 685 aaKnown RBP1.67□□□□□ -2.14
HIR3YJR140C CDC21P06785 304 aa1.67□□□□□ -2.14
HIR3YJR140C SLM5P25345 492 aaKnown RBP1.67□□□□□ -2.14
HIR3YJR140C CYS4P32582 507 aaKnown RBP1.67□□□□□ -2.14
HIR3YJR140C COX13P32799 129 aa1.67□□□□□ -2.14
HIR3YJR140C MNS1P32906 549 aa1.67□□□□□ -2.14
HIR3YJR140C RRP4P38792 359 aaKnown RBP1.67□□□□□ -2.14
HIR3YJR140C BZZ1P38822 633 aa1.67□□□□□ -2.14
HIR3YJR140C YHR131CP38835 850 aa1.67□□□□□ -2.14
HIR3YJR140C LYS1P38998 373 aaRIP-Chip data1.67□□□□□ -2.14 RIP-Chip
HIR3YJR140C YMR010WQ03687 405 aa1.67□□□□□ -2.14
HIR3YJR140C YDR415CQ04033 374 aaPredicted RBP1.67□□□□□ -2.14
HIR3YJR140C YMR254CQ04838 102 aa1.67□□□□□ -2.14
HIR3YJR140C NFI1Q12216 726 aa1.67□□□□□ -2.14
HIR3YJR140C RNR2P09938 399 aaKnown RBP1.67□□□□□ -2.14
HIR3YJR140C ATR1P13090 542 aa1.67□□□□□ -2.14
HIR3YJR140C YAP1P19880 650 aaKnown RBP1.67□□□□□ -2.14
HIR3YJR140C RRP7P25368 297 aaPredicted RBP1.67□□□□□ -2.14
HIR3YJR140C PHO91P27514 894 aa1.67□□□□□ -2.14
HIR3YJR140C PRP21P32524 280 aaPredicted RBP1.67□□□□□ -2.14
HIR3YJR140C YBR056WP38081 501 aa1.67□□□□□ -2.14
HIR3YJR140C STP1Q00947 519 aa1.67□□□□□ -2.14
HIR3YJR140C ODC1Q03028 310 aa1.67□□□□□ -2.14
HIR3YJR140C RSN1Q03516 953 aa1.67□□□□□ -2.14
HIR3YJR140C BET5Q03630 159 aa1.67□□□□□ -2.14
HIR3YJR140C URH1Q04179 340 aa1.67□□□□□ -2.14
HIR3YJR140C RRN11Q04712 507 aa1.67□□□□□ -2.14
HIR3YJR140C GRS2Q06817 618 aa1.67□□□□□ -2.14
HIR3YJR140C RGS2Q99188 309 aa1.67□□□□□ -2.14
HIR3YJR140C ARF1P11076 181 aaKnown RBP1.67□□□□□ -2.14
HIR3YJR140C ATP11P32453 318 aa1.67□□□□□ -2.14
HIR3YJR140C TRS65P32893 560 aa1.67□□□□□ -2.14
HIR3YJR140C ASK1P35734 292 aa1.67□□□□□ -2.14
HIR3YJR140C YPS6P40583 537 aa1.67□□□□□ -2.14
HIR3YJR140C CAF40P53829 373 aa1.67□□□□□ -2.14
HIR3YJR140C AQR1P53943 586 aa1.67□□□□□ -2.14
HIR3YJR140C RPS10AQ08745 105 aaPredicted RBP1.67□□□□□ -2.14
HIR3YJR140C HTZ1Q12692 134 aaKnown RBP1.67□□□□□ -2.14
HIR3YJR140C DST1P07273 309 aa1.67□□□□□ -2.14
HIR3YJR140C LSB5P25369 354 aa1.67□□□□□ -2.14
HIR3YJR140C ACH1P32316 526 aa1.67□□□□□ -2.14
HIR3YJR140C ERG1P32476 496 aaKnown RBP1.67□□□□□ -2.14
HIR3YJR140C NRP1P32770 719 aaKnown RBP RIP-Chip data1.67□□□□□ -2.14not detected
HIR3YJR140C BNA3P47039 444 aaKnown RBP1.67□□□□□ -2.14
HIR3YJR140C MPP10P47083 593 aaKnown RBP1.67□□□□□ -2.14
HIR3YJR140C BET4Q00618 327 aa1.67□□□□□ -2.14
HIR3YJR140C YPL014WQ02606 381 aa1.67□□□□□ -2.14
HIR3YJR140C SLD5Q03406 294 aa1.67□□□□□ -2.14
HIR3YJR140C YMR310CQ04867 317 aaPredicted RBP1.67□□□□□ -2.14
HIR3YJR140C BNA5Q05979 453 aa1.67□□□□□ -2.14
HIR3YJR140C SHS1Q07657 551 aa1.67□□□□□ -2.14
HIR3YJR140C YOL159CQ08300 171 aa1.67□□□□□ -2.14
HIR3YJR140C NCE102Q12207 173 aaRIP-Chip data1.67□□□□□ -2.14not detected
HIR3YJR140C CDC37P06101 506 aaKnown RBP1.66□□□□□ -2.14
HIR3YJR140C BAR1P12630 587 aa1.66□□□□□ -2.14
HIR3YJR140C SKT5P34226 696 aa1.66□□□□□ -2.14
HIR3YJR140C INM1P38710 295 aa1.66□□□□□ -2.14
HIR3YJR140C AIP1P46680 615 aaKnown RBP1.66□□□□□ -2.14
HIR3YJR140C GPI8P49018 411 aa1.66□□□□□ -2.14
HIR3YJR140C TDA7P53882 636 aaPredicted RBP1.66□□□□□ -2.14
HIR3YJR140C YOL075CQ08234 1294 aa1.66□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms