RNA–Protein interactions for RNA: YJR060W

CBF1, Transcript of Basic helix-loop-helix (bHLH) protein, yeastyeast

Gene CBF1, Length 1,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF1YJR060W TEX1P53851 422 aaKnown RBP5.21□□□□□ -1.58
CBF1YJR060W ACS1Q01574 713 aa5.21□□□□□ -1.58
CBF1YJR060W RCO1Q04779 684 aa5.21□□□□□ -1.58
CBF1YJR060W STE23Q06010 1027 aa5.21□□□□□ -1.58
CBF1YJR060W FRE5Q08908 694 aa5.21□□□□□ -1.58
CBF1YJR060W SAM4Q08985 325 aaKnown RBP5.21□□□□□ -1.58
CBF1YJR060W YOR012WQ12351 137 aa5.21□□□□□ -1.58
CBF1YJR060W NAG1Q8TGN9 163 aa5.21□□□□□ -1.58
CBF1YJR060W HRP1Q99383 534 aaKnown RBP5.21□□□□□ -1.58
CBF1YJR060W ACC1Q00955 2233 aaKnown RBP5.21□□□□□ -1.58
CBF1YJR060W ILV2P07342 687 aaKnown RBP5.2□□□□□ -1.58
CBF1YJR060W GCY1P14065 312 aaKnown RBP RIP-Chip data5.2□□□□□ -1.58not detected
CBF1YJR060W NSP1P14907 823 aaKnown RBP5.2□□□□□ -1.58
CBF1YJR060W HSP26P15992 214 aaKnown RBP RIP-Chip data5.2□□□□□ -1.58not detected
CBF1YJR060W PHO84P25297 587 aaKnown RBP5.2□□□□□ -1.58
CBF1YJR060W RFA2P26754 273 aaKnown RBP5.2□□□□□ -1.58
CBF1YJR060W BEM1P29366 551 aa5.2□□□□□ -1.58
CBF1YJR060W GDA1P32621 518 aa5.2□□□□□ -1.58
CBF1YJR060W PRP18P33411 251 aaPredicted RBP5.2□□□□□ -1.58
CBF1YJR060W ETR1P38071 380 aa5.2□□□□□ -1.58
CBF1YJR060W IFA38P38286 347 aa5.2□□□□□ -1.58
CBF1YJR060W YHI9P38765 294 aa5.2□□□□□ -1.58
CBF1YJR060W SPC97P38863 823 aa5.2□□□□□ -1.58
CBF1YJR060W CYC2P38909 366 aa5.2□□□□□ -1.58
CBF1YJR060W TIF34P40217 347 aaKnown RBP5.2□□□□□ -1.58
CBF1YJR060W HOS4P40480 1083 aa5.2□□□□□ -1.58
CBF1YJR060W SRB7P47822 140 aa5.2□□□□□ -1.58
CBF1YJR060W NBP35P52920 328 aa5.2□□□□□ -1.58
CBF1YJR060W RCF2P53721 224 aa5.2□□□□□ -1.58
CBF1YJR060W ZRG17P53735 605 aa5.2□□□□□ -1.58
CBF1YJR060W TAF11Q04226 346 aa5.2□□□□□ -1.58
CBF1YJR060W ARG7Q04728 441 aa5.2□□□□□ -1.58
CBF1YJR060W VID22Q05934 901 aa5.2□□□□□ -1.58
CBF1YJR060W VPS68Q12016 184 aa5.2□□□□□ -1.58
CBF1YJR060W SRO7Q12038 1033 aa5.2□□□□□ -1.58
CBF1YJR060W NUS1Q12063 375 aa5.2□□□□□ -1.58
CBF1YJR060W SMF3Q12078 473 aaPredicted RBP5.2□□□□□ -1.58
CBF1YJR060W TOR1P35169 2470 aa5.2□□□□□ -1.58
CBF1YJR060W POL2P21951 2222 aaKnown RBP5.19□□□□□ -1.58
CBF1YJR060W ARG4P04076 463 aaPredicted RBP5.19□□□□□ -1.58
CBF1YJR060W SSC1P0CS90 654 aaKnown RBP5.19□□□□□ -1.58
CBF1YJR060W AMD1P15274 810 aaKnown RBP5.19□□□□□ -1.58
CBF1YJR060W YCR099CP25657 155 aa5.19□□□□□ -1.58
CBF1YJR060W CYM1P32898 989 aa5.19□□□□□ -1.58
CBF1YJR060W TIP20P33891 701 aa5.19□□□□□ -1.58
CBF1YJR060W TFC3P34111 1160 aa5.19□□□□□ -1.58
CBF1YJR060W PHO11P35842 467 aa5.19□□□□□ -1.58
CBF1YJR060W YPT52P36018 234 aaKnown RBP5.19□□□□□ -1.58
CBF1YJR060W MUD2P36084 527 aaKnown RBP5.19□□□□□ -1.58
CBF1YJR060W SET3P36124 751 aa5.19□□□□□ -1.58
CBF1YJR060W YBR138CP38277 524 aa5.19□□□□□ -1.58
CBF1YJR060W PHO12P38693 467 aa5.19□□□□□ -1.58
CBF1YJR060W RRP3P38712 501 aaKnown RBP5.19□□□□□ -1.58
CBF1YJR060W WSC4P38739 605 aa5.19□□□□□ -1.58
CBF1YJR060W PCL5P38794 229 aa5.19□□□□□ -1.58
CBF1YJR060W AXL2P38928 823 aa5.19□□□□□ -1.58
CBF1YJR060W TIM17P39515 158 aa5.19□□□□□ -1.58
CBF1YJR060W MEP1P40260 492 aa5.19□□□□□ -1.58
CBF1YJR060W YJL107CP42947 387 aa5.19□□□□□ -1.58
CBF1YJR060W SLI1P53304 468 aa5.19□□□□□ -1.58
CBF1YJR060W BUD32P53323 261 aa5.19□□□□□ -1.58
CBF1YJR060W FRE4P53746 719 aa5.19□□□□□ -1.58
CBF1YJR060W NHP10Q03435 203 aa5.19□□□□□ -1.58
CBF1YJR060W ARX1Q03862 593 aaKnown RBP5.19□□□□□ -1.58
CBF1YJR060W YLR177WQ06251 628 aa5.19□□□□□ -1.58
CBF1YJR060W YLL032CQ07834 825 aaKnown RBP RIP-Chip data5.19□□□□□ -1.58not detected
CBF1YJR060W ATG10Q07879 167 aa5.19□□□□□ -1.58
CBF1YJR060W RUD3Q12234 484 aaKnown RBP5.19□□□□□ -1.58
CBF1YJR060W RMD5Q12508 421 aa5.19□□□□□ -1.58
CBF1YJR060W YPR089WO13585 888 aa5.18□□□□□ -1.58
CBF1YJR060W CDC31P06704 161 aaKnown RBP5.18□□□□□ -1.58
CBF1YJR060W ABF1P14164 731 aa5.18□□□□□ -1.58
CBF1YJR060W GUK1P15454 187 aaKnown RBP5.18□□□□□ -1.58
CBF1YJR060W RPB4P20433 221 aaPredicted RBP5.18□□□□□ -1.58
CBF1YJR060W SAN1P22470 610 aa5.18□□□□□ -1.58
CBF1YJR060W SPR1P32603 445 aa5.18□□□□□ -1.58
CBF1YJR060W GMH1P36125 273 aa5.18□□□□□ -1.58
CBF1YJR060W RPF2P36160 344 aaKnown RBP5.18□□□□□ -1.58
CBF1YJR060W CDS1P38221 457 aa5.18□□□□□ -1.58
CBF1YJR060W YEL068CP39977 110 aa5.18□□□□□ -1.58
CBF1YJR060W GET2P40056 285 aa5.18□□□□□ -1.58
CBF1YJR060W CAB2P40506 365 aa5.18□□□□□ -1.58
CBF1YJR060W GCD14P46959 383 aaPredicted RBP5.18□□□□□ -1.58
CBF1YJR060W SWS2P53937 143 aa5.18□□□□□ -1.58
CBF1YJR060W TRM82Q03774 444 aa5.18□□□□□ -1.58
CBF1YJR060W HPT1Q04178 221 aaKnown RBP5.18□□□□□ -1.58
CBF1YJR060W HEL2Q05580 639 aaKnown RBP5.18□□□□□ -1.58
CBF1YJR060W GRS2Q06817 618 aa5.18□□□□□ -1.58
CBF1YJR060W YET3Q07451 203 aa5.18□□□□□ -1.58
CBF1YJR060W PLB3Q08108 686 aa5.18□□□□□ -1.58
CBF1YJR060W TRM8Q12009 286 aa5.18□□□□□ -1.58
CBF1YJR060W NOP58Q12499 511 aaKnown RBP5.18□□□□□ -1.58
CBF1YJR060W RGS2Q99188 309 aa5.18□□□□□ -1.58
CBF1YJR060W BRR2P32639 2163 aaKnown RBP5.18□□□□□ -1.58
CBF1YJR060W MDM35O60200 86 aa5.17□□□□□ -1.58
CBF1YJR060W SEC12P11655 471 aa5.17□□□□□ -1.58
CBF1YJR060W LAT1P12695 482 aaKnown RBP5.17□□□□□ -1.58
CBF1YJR060W RSR1P13856 272 aa5.17□□□□□ -1.58
CBF1YJR060W SCL1P21243 252 aaKnown RBP5.17□□□□□ -1.58
CBF1YJR060W MRPL9P31334 269 aa5.17□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 42 ms