RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W YHI9P38765 294 aa5.93□□□□□ -1.46
PRE3YJL001W VRG4P40107 337 aa5.93□□□□□ -1.46
PRE3YJL001W YIL152WP40455 235 aa5.93□□□□□ -1.46
PRE3YJL001W PHB1P40961 287 aa5.93□□□□□ -1.46
PRE3YJL001W NIT2P47016 307 aa5.93□□□□□ -1.46
PRE3YJL001W PAN2P53010 1115 aaPredicted RBP5.93□□□□□ -1.46
PRE3YJL001W MPS2P53159 387 aa5.93□□□□□ -1.46
PRE3YJL001W EAF7P53911 425 aaKnown RBP5.93□□□□□ -1.46
PRE3YJL001W YMR114CQ04471 368 aaKnown RBP5.93□□□□□ -1.46
PRE3YJL001W YDR056CQ12025 205 aa5.93□□□□□ -1.46
PRE3YJL001W AIM41Q12032 185 aa5.93□□□□□ -1.46
PRE3YJL001W MRH1Q12117 320 aaPredicted RBP5.93□□□□□ -1.46
PRE3YJL001W HUA2Q12134 243 aa5.93□□□□□ -1.46
PRE3YJL001W ICT1Q12385 394 aa5.93□□□□□ -1.46
PRE3YJL001W STE2D6VTK4 431 aa5.92□□□□□ -1.46
PRE3YJL001W SED4P25365 1065 aa5.92□□□□□ -1.46
PRE3YJL001W MGT1P26188 188 aa5.92□□□□□ -1.46
PRE3YJL001W DAL3P32459 195 aa5.92□□□□□ -1.46
PRE3YJL001W ORC2P32833 620 aa5.92□□□□□ -1.46
PRE3YJL001W OMA1P36163 345 aa5.92□□□□□ -1.46
PRE3YJL001W MOH1P38191 138 aa5.92□□□□□ -1.46
PRE3YJL001W POP4P38336 279 aa5.92□□□□□ -1.46
PRE3YJL001W GPP2P40106 250 aaKnown RBP5.92□□□□□ -1.46
PRE3YJL001W MET12P46151 657 aa5.92□□□□□ -1.46
PRE3YJL001W LCL3P53153 274 aa5.92□□□□□ -1.46
PRE3YJL001W YGR015CP53208 328 aa5.92□□□□□ -1.46
PRE3YJL001W ROY1Q04847 553 aa5.92□□□□□ -1.46
PRE3YJL001W CUE5Q08412 411 aaKnown RBP5.92□□□□□ -1.46
PRE3YJL001W AKR2Q12013 749 aa5.92□□□□□ -1.46
PRE3YJL001W ATG29Q12092 213 aa5.92□□□□□ -1.46
PRE3YJL001W CDC21P06785 304 aa5.91□□□□□ -1.46
PRE3YJL001W YML002WP0CF17 737 aa5.91□□□□□ -1.46
PRE3YJL001W MXR2P25566 168 aa5.91□□□□□ -1.46
PRE3YJL001W FAA1P30624 700 aaKnown RBP5.91□□□□□ -1.46
PRE3YJL001W VHC1P38329 1120 aa5.91□□□□□ -1.46
PRE3YJL001W INM1P38710 295 aa5.91□□□□□ -1.46
PRE3YJL001W AXL2P38928 823 aa5.91□□□□□ -1.46
PRE3YJL001W PZF1P39933 429 aa5.91□□□□□ -1.46
PRE3YJL001W MEP1P40260 492 aa5.91□□□□□ -1.46
PRE3YJL001W URM1P40554 99 aaPredicted RBP5.91□□□□□ -1.46
PRE3YJL001W TIS11P47977 285 aa5.91□□□□□ -1.46
PRE3YJL001W MTR3P48240 250 aaPredicted RBP5.91□□□□□ -1.46
PRE3YJL001W YGR250CP53316 781 aaKnown RBP5.91□□□□□ -1.46
PRE3YJL001W YMR034CQ05131 434 aaPredicted RBP5.91□□□□□ -1.46
PRE3YJL001W OMS1Q06668 471 aa5.91□□□□□ -1.46
PRE3YJL001W YDL218WQ07629 317 aa5.91□□□□□ -1.46
PRE3YJL001W TEF1P02994 458 aaKnown RBP5.9□□□□□ -1.46
PRE3YJL001W YCR102CP25608 368 aa5.9□□□□□ -1.46
PRE3YJL001W ADE1P27616 306 aa5.9□□□□□ -1.46
PRE3YJL001W RPS27AP35997 82 aaKnown RBP5.9□□□□□ -1.46
PRE3YJL001W RPS27BP38711 82 aa5.9□□□□□ -1.46
PRE3YJL001W GGC1P38988 300 aa5.9□□□□□ -1.46
PRE3YJL001W HXT6P39003 570 aaKnown RBP5.9□□□□□ -1.46
PRE3YJL001W HXT7P39004 570 aa5.9□□□□□ -1.46
PRE3YJL001W HAT2P39984 401 aa5.9□□□□□ -1.46
PRE3YJL001W NDE1P40215 560 aa5.9□□□□□ -1.46
PRE3YJL001W STB2P46679 850 aa5.9□□□□□ -1.46
PRE3YJL001W YJR149WP47177 404 aa5.9□□□□□ -1.46
PRE3YJL001W OCA1P50946 238 aaPredicted RBP5.9□□□□□ -1.46
PRE3YJL001W VPS73P53142 486 aaKnown RBP5.9□□□□□ -1.46
PRE3YJL001W ERG13P54839 491 aaKnown RBP5.9□□□□□ -1.46
PRE3YJL001W FDC1Q03034 503 aa5.9□□□□□ -1.46
PRE3YJL001W CDC123Q05791 360 aa5.9□□□□□ -1.46
PRE3YJL001W GPB1Q08886 897 aa5.9□□□□□ -1.46
PRE3YJL001W YOR378WQ08902 515 aa5.9□□□□□ -1.46
PRE3YJL001W SEC16P48415 2195 aaKnown RBP5.89□□□□□ -1.47
PRE3YJL001W ATP4P05626 244 aa5.89□□□□□ -1.47
PRE3YJL001W RAD1P06777 1100 aa5.89□□□□□ -1.47
PRE3YJL001W SEC53P07283 254 aaKnown RBP5.89□□□□□ -1.47
PRE3YJL001W RPS21AP0C0V8 87 aaKnown RBP5.89□□□□□ -1.47
PRE3YJL001W KAR1P11927 433 aa5.89□□□□□ -1.47
PRE3YJL001W CHA1P25379 360 aaKnown RBP5.89□□□□□ -1.47
PRE3YJL001W URA7P28274 579 aaKnown RBP5.89□□□□□ -1.47
PRE3YJL001W TPS2P31688 896 aaKnown RBP5.89□□□□□ -1.47
PRE3YJL001W STE14P32584 239 aa5.89□□□□□ -1.47
PRE3YJL001W BEM3P32873 1128 aa5.89□□□□□ -1.47
PRE3YJL001W EFM1P38732 585 aa5.89□□□□□ -1.47
PRE3YJL001W GPI16P38875 610 aa5.89□□□□□ -1.47
PRE3YJL001W MET30P39014 640 aa5.89□□□□□ -1.47
PRE3YJL001W MRPL22P53881 309 aa5.89□□□□□ -1.47
PRE3YJL001W BOP3P53958 396 aa5.89□□□□□ -1.47
PRE3YJL001W SUB1P54000 292 aaKnown RBP5.89□□□□□ -1.47
PRE3YJL001W YOR342CQ12182 319 aa5.89□□□□□ -1.47
PRE3YJL001W ZRT2Q12436 422 aa5.89□□□□□ -1.47
PRE3YJL001W RPS21BQ3E754 87 aaKnown RBP5.89□□□□□ -1.47
PRE3YJL001W DFG16Q99234 619 aa5.89□□□□□ -1.47
PRE3YJL001W PEP5P12868 1029 aa5.88□□□□□ -1.47
PRE3YJL001W PMT2P31382 759 aa5.88□□□□□ -1.47
PRE3YJL001W KKQ8P36004 724 aa5.88□□□□□ -1.47
PRE3YJL001W RRN10P38204 145 aa5.88□□□□□ -1.47
PRE3YJL001W YHR112CP38716 378 aa5.88□□□□□ -1.47
PRE3YJL001W NPT1P39683 429 aaKnown RBP5.88□□□□□ -1.47
PRE3YJL001W MNT3P40549 630 aa5.88□□□□□ -1.47
PRE3YJL001W NMD5P46970 1048 aa5.88□□□□□ -1.47
PRE3YJL001W YJR039WP47107 1121 aa5.88□□□□□ -1.47
PRE3YJL001W CWC22P53333 577 aaKnown RBP5.88□□□□□ -1.47
PRE3YJL001W NUP53Q03790 475 aa5.88□□□□□ -1.47
PRE3YJL001W MUS81Q04149 632 aaPredicted RBP5.88□□□□□ -1.47
PRE3YJL001W ECI1Q05871 280 aa5.88□□□□□ -1.47
PRE3YJL001W VAC14Q06708 880 aa5.88□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms