RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C YCR087C-AP37263 153 aa12.52□□□□□ -0.41
SHU1YHL006C ATG7P38862 630 aa12.52□□□□□ -0.41
SHU1YHL006C SHU2P38957 223 aa12.52□□□□□ -0.41
SHU1YHL006C SER3P40054 469 aa12.52□□□□□ -0.41
SHU1YHL006C NNF2P53253 936 aa12.52□□□□□ -0.41
SHU1YHL006C SNP1Q00916 300 aaPredicted RBP12.52□□□□□ -0.41
SHU1YHL006C MSC1Q03104 513 aa12.52□□□□□ -0.41
SHU1YHL006C SWF1Q04629 336 aa12.52□□□□□ -0.41
SHU1YHL006C TPO4Q12256 659 aa12.52□□□□□ -0.41
SHU1YHL006C RPS17AP02407 136 aaKnown RBP12.51□□□□□ -0.41
SHU1YHL006C CDC9P04819 755 aa12.51□□□□□ -0.41
SHU1YHL006C RPS17BP14127 136 aaKnown RBP12.51□□□□□ -0.41
SHU1YHL006C MSS116P15424 664 aaKnown RBP12.51□□□□□ -0.41
SHU1YHL006C SPB1P25582 841 aaPredicted RBP12.51□□□□□ -0.41
SHU1YHL006C PTR3P43606 678 aa12.51□□□□□ -0.41
SHU1YHL006C OCA1P50946 238 aaPredicted RBP12.51□□□□□ -0.41
SHU1YHL006C OAZ1Q02803 292 aa12.51□□□□□ -0.41
SHU1YHL006C RQC1Q05468 723 aaKnown RBP12.51□□□□□ -0.41
SHU1YHL006C KAE1P36132 386 aa12.5□□□□□ -0.41
SHU1YHL006C FRT2P39734 528 aa12.5□□□□□ -0.41
SHU1YHL006C CUP9P41817 306 aa12.5□□□□□ -0.41
SHU1YHL006C FMP32P43557 207 aa12.5□□□□□ -0.41
SHU1YHL006C UBX6P47049 396 aa12.5□□□□□ -0.41
SHU1YHL006C AIM22P47051 409 aa12.5□□□□□ -0.41
SHU1YHL006C UPF3P48412 387 aaKnown RBP12.5□□□□□ -0.41
SHU1YHL006C REC102Q02721 264 aa12.5□□□□□ -0.41
SHU1YHL006C SLM5P25345 492 aaKnown RBP12.49□□□□□ -0.41
SHU1YHL006C ADH7P25377 361 aa12.49□□□□□ -0.41
SHU1YHL006C SSH4P32343 579 aa12.49□□□□□ -0.41
SHU1YHL006C ICE2P40499 491 aa12.49□□□□□ -0.41
SHU1YHL006C ATF2P53296 535 aa12.49□□□□□ -0.41
SHU1YHL006C YDR124WQ04608 324 aa12.49□□□□□ -0.41
SHU1YHL006C OMS1Q06668 471 aa12.49□□□□□ -0.41
SHU1YHL006C PHO87P25360 923 aa12.48□□□□□ -0.41
SHU1YHL006C SPO23P33757 523 aa12.48□□□□□ -0.41
SHU1YHL006C UTP25P40498 721 aaKnown RBP12.48□□□□□ -0.41
SHU1YHL006C MUP1P50276 574 aa12.48□□□□□ -0.41
SHU1YHL006C NUP53Q03790 475 aa12.48□□□□□ -0.41
SHU1YHL006C YDL121CQ07541 149 aa12.48□□□□□ -0.41
SHU1YHL006C ESA1Q08649 445 aa12.48□□□□□ -0.41
SHU1YHL006C SLF1Q12034 447 aaKnown RBP12.48□□□□□ -0.41
SHU1YHL006C YKL068W-AQ3E826 78 aa12.48□□□□□ -0.41
SHU1YHL006C RPL7AP05737 244 aaKnown RBP12.47□□□□□ -0.41
SHU1YHL006C PRT1P06103 763 aaKnown RBP12.47□□□□□ -0.41
SHU1YHL006C CYT1P07143 309 aa12.47□□□□□ -0.41
SHU1YHL006C ARD1P07347 238 aaPredicted RBP12.47□□□□□ -0.41
SHU1YHL006C GLK1P17709 500 aaKnown RBP12.47□□□□□ -0.41
SHU1YHL006C DBR1P24309 405 aaKnown RBP12.47□□□□□ -0.41
SHU1YHL006C ATO2P32907 282 aa12.47□□□□□ -0.41
SHU1YHL006C VPS52P39904 641 aa12.47□□□□□ -0.41
SHU1YHL006C YIL001WP40560 513 aa12.47□□□□□ -0.41
SHU1YHL006C PHB1P40961 287 aa12.47□□□□□ -0.41
SHU1YHL006C NAS6P50086 228 aa12.47□□□□□ -0.41
SHU1YHL006C RPL7BQ12213 244 aaKnown RBP12.47□□□□□ -0.41
SHU1YHL006C STE7P06784 515 aa12.46□□□□□ -0.41
SHU1YHL006C RPL43AP0CX25 92 aaKnown RBP12.46□□□□□ -0.41
SHU1YHL006C RPL43BP0CX26 92 aa12.46□□□□□ -0.41
SHU1YHL006C SLY41P22215 453 aa12.46□□□□□ -0.41
SHU1YHL006C SYP1P25623 870 aaKnown RBP12.46□□□□□ -0.41
SHU1YHL006C CMK1P27466 446 aaKnown RBP12.46□□□□□ -0.41
SHU1YHL006C MNN2P38069 597 aa12.46□□□□□ -0.41
SHU1YHL006C COS111P38308 924 aa12.46□□□□□ -0.41
SHU1YHL006C BZZ1P38822 633 aa12.46□□□□□ -0.41
SHU1YHL006C YEN1P40028 759 aa12.46□□□□□ -0.41
SHU1YHL006C NOB1Q08444 459 aaKnown RBP12.46□□□□□ -0.41
SHU1YHL006C NOT5Q12514 560 aaPredicted RBP12.46□□□□□ -0.41
SHU1YHL006C STP22P25604 385 aa12.45□□□□□ -0.42
SHU1YHL006C YCR102CP25608 368 aa12.45□□□□□ -0.42
SHU1YHL006C BUD14P27637 709 aa12.45□□□□□ -0.42
SHU1YHL006C DCG1P32460 244 aa12.45□□□□□ -0.42
SHU1YHL006C STE14P32584 239 aa12.45□□□□□ -0.42
SHU1YHL006C LOS1P33418 1100 aaPredicted RBP12.45□□□□□ -0.42
SHU1YHL006C SPC42P36094 363 aa12.45□□□□□ -0.42
SHU1YHL006C CAF4P36130 643 aa12.45□□□□□ -0.42
SHU1YHL006C YBR139WP38109 508 aa12.45□□□□□ -0.42
SHU1YHL006C SEC24P40482 926 aaKnown RBP12.45□□□□□ -0.42
SHU1YHL006C TED1P40533 473 aa12.45□□□□□ -0.42
SHU1YHL006C MAL11P53048 616 aa12.45□□□□□ -0.42
SHU1YHL006C VPS73P53142 486 aaKnown RBP12.45□□□□□ -0.42
SHU1YHL006C YNL010WP53981 241 aaKnown RBP12.45□□□□□ -0.42
SHU1YHL006C GLO2Q05584 274 aa12.45□□□□□ -0.42
SHU1YHL006C YPR174CQ06616 221 aaPredicted RBP12.45□□□□□ -0.42
SHU1YHL006C NSI1Q12457 570 aa12.45□□□□□ -0.42
SHU1YHL006C APN1P22936 367 aa12.44□□□□□ -0.42
SHU1YHL006C NAR1P23503 491 aaKnown RBP12.44□□□□□ -0.42
SHU1YHL006C PTC1P35182 281 aa12.44□□□□□ -0.42
SHU1YHL006C DOA1P36037 715 aa12.44□□□□□ -0.42
SHU1YHL006C AUR1P36107 401 aaPredicted RBP12.44□□□□□ -0.42
SHU1YHL006C GTO1P48239 356 aa12.44□□□□□ -0.42
SHU1YHL006C IDP3P53982 420 aaKnown RBP12.44□□□□□ -0.42
SHU1YHL006C IRC15Q02733 499 aa12.44□□□□□ -0.42
SHU1YHL006C ISR1Q06098 443 aaKnown RBP12.44□□□□□ -0.42
SHU1YHL006C YEH2Q07950 538 aa12.44□□□□□ -0.42
SHU1YHL006C GET4Q12125 312 aa12.44□□□□□ -0.42
SHU1YHL006C HUA2Q12134 243 aa12.44□□□□□ -0.42
SHU1YHL006C ATG34Q12292 412 aa12.44□□□□□ -0.42
SHU1YHL006C NTO1Q12311 748 aa12.44□□□□□ -0.42
SHU1YHL006C ALG7P07286 448 aa12.43□□□□□ -0.42
SHU1YHL006C ARE1P25628 610 aa12.43□□□□□ -0.42
SHU1YHL006C MPS3P47069 682 aa12.43□□□□□ -0.42
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms