RNA–Protein interactions for RNA: YFR004W

RPN11, Transcript of Metalloprotease subunit of 19S regulatory particle, yeastyeast

Gene RPN11, Length 921 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN11YFR004W RHO1P06780 209 aaKnown RBP5.84□□□□□ -1.47
RPN11YFR004W COR1P07256 457 aa5.84□□□□□ -1.47
RPN11YFR004W SPT15P13393 240 aaKnown RBP5.84□□□□□ -1.47
RPN11YFR004W MSS116P15424 664 aaKnown RBP5.84□□□□□ -1.47
RPN11YFR004W UGA1P17649 471 aa5.84□□□□□ -1.47
RPN11YFR004W MIH1P23748 554 aa5.84□□□□□ -1.47
RPN11YFR004W PUP2P32379 260 aa5.84□□□□□ -1.47
RPN11YFR004W NPL6P32832 435 aa5.84□□□□□ -1.47
RPN11YFR004W YKL077WP36081 392 aa5.84□□□□□ -1.47
RPN11YFR004W YKR015CP36111 568 aa5.84□□□□□ -1.47
RPN11YFR004W SKG1P36169 355 aa5.84□□□□□ -1.47
RPN11YFR004W YBR138CP38277 524 aa5.84□□□□□ -1.47
RPN11YFR004W TAE1P38340 232 aa5.84□□□□□ -1.47
RPN11YFR004W RRP3P38712 501 aaKnown RBP5.84□□□□□ -1.47
RPN11YFR004W GND1P38720 489 aaKnown RBP5.84□□□□□ -1.47
RPN11YFR004W DHH1P39517 506 aaKnown RBP5.84□□□□□ -1.47
RPN11YFR004W ALG8P40351 577 aa5.84□□□□□ -1.47
RPN11YFR004W FKH2P41813 862 aa5.84□□□□□ -1.47
RPN11YFR004W ELP2P42935 788 aa5.84□□□□□ -1.47
RPN11YFR004W GCD14P46959 383 aaPredicted RBP5.84□□□□□ -1.47
RPN11YFR004W YJR124CP47159 448 aa5.84□□□□□ -1.47
RPN11YFR004W TIS11P47977 285 aa5.84□□□□□ -1.47
RPN11YFR004W UPF3P48412 387 aaKnown RBP5.84□□□□□ -1.47
RPN11YFR004W MNT2P53059 558 aa5.84□□□□□ -1.47
RPN11YFR004W TGL2P54857 326 aa5.84□□□□□ -1.47
RPN11YFR004W PRP38Q00723 242 aaPredicted RBP5.84□□□□□ -1.47
RPN11YFR004W ECM9Q02202 377 aa5.84□□□□□ -1.47
RPN11YFR004W YDR132CQ03900 495 aa5.84□□□□□ -1.47
RPN11YFR004W SMP3Q04174 516 aa5.84□□□□□ -1.47
RPN11YFR004W SOG2Q08817 791 aa5.84□□□□□ -1.47
RPN11YFR004W YDL176WQ12027 708 aa5.84□□□□□ -1.47
RPN11YFR004W TMA7Q3E764 64 aaKnown RBP5.84□□□□□ -1.47
RPN11YFR004W YBR056W-AI2HB52 66 aa5.83□□□□□ -1.48
RPN11YFR004W SCH9P11792 824 aaKnown RBP5.83□□□□□ -1.48
RPN11YFR004W YAP1P19880 650 aaKnown RBP5.83□□□□□ -1.48
RPN11YFR004W AAT2P23542 418 aaKnown RBP5.83□□□□□ -1.48
RPN11YFR004W DPB2P24482 689 aaPredicted RBP5.83□□□□□ -1.48
RPN11YFR004W RAD51P25454 400 aa5.83□□□□□ -1.48
RPN11YFR004W PHO91P27514 894 aa5.83□□□□□ -1.48
RPN11YFR004W MRPL9P31334 269 aa5.83□□□□□ -1.48
RPN11YFR004W FUN30P31380 1131 aa5.83□□□□□ -1.48
RPN11YFR004W STE14P32584 239 aa5.83□□□□□ -1.48
RPN11YFR004W COX13P32799 129 aa5.83□□□□□ -1.48
RPN11YFR004W LIP5P32875 414 aa5.83□□□□□ -1.48
RPN11YFR004W SEC66P33754 206 aa5.83□□□□□ -1.48
RPN11YFR004W CTF13P35203 478 aa5.83□□□□□ -1.48
RPN11YFR004W MRPL17P36528 281 aa5.83□□□□□ -1.48
RPN11YFR004W ROT2P38138 954 aa5.83□□□□□ -1.48
RPN11YFR004W DSS1P39112 969 aa5.83□□□□□ -1.48
RPN11YFR004W PTR3P43606 678 aa5.83□□□□□ -1.48
RPN11YFR004W GUS1P46655 708 aaKnown RBP RIP-Chip data5.83□□□□□ -1.48not detected
RPN11YFR004W BUD13P46947 266 aaPredicted RBP5.83□□□□□ -1.48
RPN11YFR004W GLG2P47011 380 aa5.83□□□□□ -1.48
RPN11YFR004W YPT32P51996 222 aaKnown RBP5.83□□□□□ -1.48
RPN11YFR004W RAD33Q04231 177 aa5.83□□□□□ -1.48
RPN11YFR004W GSF2Q04697 403 aaKnown RBP5.83□□□□□ -1.48
RPN11YFR004W VAM6Q07468 1049 aa5.83□□□□□ -1.48
RPN11YFR004W YDL121CQ07541 149 aa5.83□□□□□ -1.48
RPN11YFR004W VCX1Q99385 411 aa5.83□□□□□ -1.48
RPN11YFR004W MRP10O75012 95 aa5.82□□□□□ -1.48
RPN11YFR004W ATP4P05626 244 aa5.82□□□□□ -1.48
RPN11YFR004W KAR1P11927 433 aa5.82□□□□□ -1.48
RPN11YFR004W SST2P11972 698 aaKnown RBP5.82□□□□□ -1.48
RPN11YFR004W MRPL8P22353 238 aa5.82□□□□□ -1.48
RPN11YFR004W CTR86P25355 563 aa5.82□□□□□ -1.48
RPN11YFR004W UBC8P28263 218 aa5.82□□□□□ -1.48
RPN11YFR004W SAC1P32368 623 aaKnown RBP5.82□□□□□ -1.48
RPN11YFR004W MF(ALPHA)2P32435 120 aa5.82□□□□□ -1.48
RPN11YFR004W CYS4P32582 507 aaKnown RBP5.82□□□□□ -1.48
RPN11YFR004W LHS1P36016 881 aa5.82□□□□□ -1.48
RPN11YFR004W CAF4P36130 643 aa5.82□□□□□ -1.48
RPN11YFR004W MRPL16P38064 232 aa5.82□□□□□ -1.48
RPN11YFR004W LDB7P38210 180 aa5.82□□□□□ -1.48
RPN11YFR004W ELO1P39540 310 aa5.82□□□□□ -1.48
RPN11YFR004W SWD1P39706 426 aa5.82□□□□□ -1.48
RPN11YFR004W PAN6P40459 309 aa5.82□□□□□ -1.48
RPN11YFR004W YRB2P40517 327 aa5.82□□□□□ -1.48
RPN11YFR004W VHR1P40522 640 aa5.82□□□□□ -1.48
RPN11YFR004W KEL2P50090 882 aa5.82□□□□□ -1.48
RPN11YFR004W DIA3P52290 468 aa5.82□□□□□ -1.48
RPN11YFR004W NBP35P52920 328 aa5.82□□□□□ -1.48
RPN11YFR004W PXR1P53335 271 aaPredicted RBP5.82□□□□□ -1.48
RPN11YFR004W ARE2P53629 642 aaKnown RBP5.82□□□□□ -1.48
RPN11YFR004W YNL143CP53908 130 aa5.82□□□□□ -1.48
RPN11YFR004W YNL095CP53932 642 aa5.82□□□□□ -1.48
RPN11YFR004W SVL3Q03088 825 aaKnown RBP5.82□□□□□ -1.48
RPN11YFR004W YMR010WQ03687 405 aa5.82□□□□□ -1.48
RPN11YFR004W RAD30Q04049 632 aa5.82□□□□□ -1.48
RPN11YFR004W TY1A-MR1Q04215 440 aa5.82□□□□□ -1.48
RPN11YFR004W TRM12Q04235 462 aa5.82□□□□□ -1.48
RPN11YFR004W YHC1Q05900 231 aaKnown RBP5.82□□□□□ -1.48
RPN11YFR004W YLR413WQ06689 675 aa5.82□□□□□ -1.48
RPN11YFR004W PSR1Q07800 427 aa5.82□□□□□ -1.48
RPN11YFR004W ATG10Q07879 167 aa5.82□□□□□ -1.48
RPN11YFR004W HRK1Q08732 759 aaKnown RBP5.82□□□□□ -1.48
RPN11YFR004W UAF30Q08747 228 aa5.82□□□□□ -1.48
RPN11YFR004W JLP1Q12358 412 aa5.82□□□□□ -1.48
RPN11YFR004W AHA1Q12449 350 aaKnown RBP5.82□□□□□ -1.48
RPN11YFR004W SKM1Q12469 655 aa5.82□□□□□ -1.48
RPN11YFR004W YKL018C-AQ3E7A7 99 aa5.82□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms