RNA–Protein interactions for RNA: YER151C

UBP3, Transcript of Ubiquitin-specific protease involved in transport and osmotic response, yeast

Gene UBP3, Length 2,739 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP3	YER151C	YNR062C	P53748	327 aa		0.98	□□□□□ -2.25
UBP3	YER151C	HER2	Q03557	464 aa		0.98	□□□□□ -2.25
UBP3	YER151C	VHS1	Q03785	461 aa		0.98	□□□□□ -2.25
UBP3	YER151C	SPC19	Q03954	165 aa		0.98	□□□□□ -2.25
UBP3	YER151C	MRPL1	Q04599	285 aa		0.98	□□□□□ -2.25
UBP3	YER151C	STP3	Q05937	343 aa		0.98	□□□□□ -2.25
UBP3	YER151C	YDL242W	Q07746	117 aa		0.98	□□□□□ -2.25
UBP3	YER151C	PFA4	Q12006	378 aa		0.98	□□□□□ -2.25
UBP3	YER151C	NUR1	Q12066	484 aa		0.98	□□□□□ -2.25
UBP3	YER151C	PNO1	Q99216	274 aa	Known RBP	0.98	□□□□□ -2.25
UBP3	YER151C	FSH3	Q99369	266 aa		0.98	□□□□□ -2.25
UBP3	YER151C	YPL229W	Q99395	206 aa		0.98	□□□□□ -2.25
UBP3	YER151C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	0.98	□□□□□ -2.25	not detected
UBP3	YER151C	CDC21	P06785	304 aa		0.98	□□□□□ -2.25
UBP3	YER151C	SAM2	P19358	384 aa	Known RBP	0.98	□□□□□ -2.25
UBP3	YER151C	YAP1	P19880	650 aa	Known RBP	0.98	□□□□□ -2.25
UBP3	YER151C	AIM17	P23180	465 aa	Known RBP	0.98	□□□□□ -2.25
UBP3	YER151C	AAT2	P23542	418 aa	Known RBP	0.98	□□□□□ -2.25
UBP3	YER151C	BMH1	P29311	267 aa	Known RBP	0.98	□□□□□ -2.25
UBP3	YER151C	GEX2	P36173	615 aa		0.98	□□□□□ -2.25
UBP3	YER151C	DBP8	P38719	431 aa		0.98	□□□□□ -2.25
UBP3	YER151C	PIH1	P38768	344 aa		0.98	□□□□□ -2.25
UBP3	YER151C	RRP8	P38961	392 aa	Known RBP	0.98	□□□□□ -2.25
UBP3	YER151C	SAP1	P39955	897 aa	Known RBP	0.98	□□□□□ -2.25
UBP3	YER151C	YIL161W	P40449	235 aa	Known RBP	0.98	□□□□□ -2.25
UBP3	YER151C	MAD3	P47074	515 aa		0.98	□□□□□ -2.25
UBP3	YER151C	SHE4	P51534	789 aa		0.98	□□□□□ -2.25
UBP3	YER151C	CWC22	P53333	577 aa	Known RBP	0.98	□□□□□ -2.25
UBP3	YER151C	NRM1	P53718	249 aa		0.98	□□□□□ -2.25
UBP3	YER151C	YNL046W	P53956	172 aa		0.98	□□□□□ -2.25
UBP3	YER151C	UBX4	P54730	416 aa		0.98	□□□□□ -2.25
UBP3	YER151C	RPM2	Q02773	1202 aa		0.98	□□□□□ -2.25
UBP3	YER151C	PEX25	Q02969	394 aa		0.98	□□□□□ -2.25
UBP3	YER151C	PEX15	Q08215	383 aa		0.98	□□□□□ -2.25
UBP3	YER151C	YPL216W	Q08964	1102 aa		0.98	□□□□□ -2.25
UBP3	YER151C	GLE1	Q12315	538 aa		0.98	□□□□□ -2.25
UBP3	YER151C	TOP1	P04786	769 aa		0.97	□□□□□ -2.25
UBP3	YER151C	MSS18	P08593	268 aa		0.97	□□□□□ -2.25
UBP3	YER151C	SPS4	P09937	338 aa		0.97	□□□□□ -2.25
UBP3	YER151C	CUP2	P15315	225 aa		0.97	□□□□□ -2.25
UBP3	YER151C	PUT4	P15380	627 aa		0.97	□□□□□ -2.25
UBP3	YER151C	RPS7A	P26786	190 aa	Known RBP	0.97	□□□□□ -2.25
UBP3	YER151C	DHR2	P36009	735 aa	Predicted RBP	0.97	□□□□□ -2.25
UBP3	YER151C	IML3	P38265	245 aa		0.97	□□□□□ -2.25
UBP3	YER151C	RPT2	P40327	437 aa	Known RBP	0.97	□□□□□ -2.25
UBP3	YER151C	VPS27	P40343	622 aa	Known RBP	0.97	□□□□□ -2.25
UBP3	YER151C	YIL152W	P40455	235 aa		0.97	□□□□□ -2.25
UBP3	YER151C	CDC1	P40986	491 aa		0.97	□□□□□ -2.25
UBP3	YER151C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	0.97	□□□□□ -2.25	RIP-Chip
UBP3	YER151C	YJR012C	P47087	207 aa		0.97	□□□□□ -2.25
UBP3	YER151C	YJR054W	P47114	497 aa		0.97	□□□□□ -2.25
UBP3	YER151C	SBH2	P52871	88 aa		0.97	□□□□□ -2.25
UBP3	YER151C	SPP2	Q02521	185 aa		0.97	□□□□□ -2.25
UBP3	YER151C	RRN5	Q02983	363 aa		0.97	□□□□□ -2.25
UBP3	YER151C	MMT1	Q03218	510 aa		0.97	□□□□□ -2.25
UBP3	YER151C	YMR279C	Q03263	540 aa		0.97	□□□□□ -2.25
UBP3	YER151C	TRS31	Q03337	283 aa		0.97	□□□□□ -2.25
UBP3	YER151C	ECM22	Q05958	814 aa	Predicted RBP	0.97	□□□□□ -2.25
UBP3	YER151C	SWA2	Q06677	668 aa		0.97	□□□□□ -2.25
UBP3	YER151C	TCO89	Q08921	799 aa		0.97	□□□□□ -2.25
UBP3	YER151C	AIM41	Q12032	185 aa		0.97	□□□□□ -2.25
UBP3	YER151C	FCY22	Q12119	530 aa		0.97	□□□□□ -2.25
UBP3	YER151C	YOR214C	Q12282	236 aa		0.97	□□□□□ -2.25
UBP3	YER151C	SAL1	D6W196	494 aa		0.97	□□□□□ -2.25
UBP3	YER151C	YSP3	P25036	478 aa		0.97	□□□□□ -2.25
UBP3	YER151C	SGF29	P25554	259 aa		0.97	□□□□□ -2.25
UBP3	YER151C	MXR2	P25566	168 aa		0.97	□□□□□ -2.25
UBP3	YER151C	YCR061W	P25639	631 aa		0.97	□□□□□ -2.25
UBP3	YER151C	IMP2'	P32351	346 aa		0.97	□□□□□ -2.25
UBP3	YER151C	ANP1	P32629	500 aa		0.97	□□□□□ -2.25
UBP3	YER151C	FRE1	P32791	686 aa		0.97	□□□□□ -2.25
UBP3	YER151C	STV1	P37296	890 aa		0.97	□□□□□ -2.25
UBP3	YER151C	VHC1	P38329	1120 aa		0.97	□□□□□ -2.25
UBP3	YER151C	SEC31	P38968	1273 aa	Known RBP	0.97	□□□□□ -2.25
UBP3	YER151C	YER034W	P40022	185 aa	Known RBP	0.97	□□□□□ -2.25
UBP3	YER151C	PRM5	P40476	318 aa		0.97	□□□□□ -2.25
UBP3	YER151C	YIL024C	P40543	189 aa		0.97	□□□□□ -2.25
UBP3	YER151C	HYR1	P40581	163 aa	Known RBP	0.97	□□□□□ -2.25
UBP3	YER151C	YJR079W	P47126	109 aa		0.97	□□□□□ -2.25
UBP3	YER151C	DBP6	P53734	629 aa	Known RBP	0.97	□□□□□ -2.25
UBP3	YER151C	ESBP6	P53918	673 aa		0.97	□□□□□ -2.25
UBP3	YER151C	ABZ2	Q03266	374 aa		0.97	□□□□□ -2.25
UBP3	YER151C	EBS1	Q03466	884 aa	Known RBP	0.97	□□□□□ -2.25
UBP3	YER151C	PDR8	Q06149	701 aa		0.97	□□□□□ -2.25
UBP3	YER151C	AIM6	Q07716	390 aa		0.97	□□□□□ -2.25
UBP3	YER151C	YOL107W	Q12239	342 aa		0.97	□□□□□ -2.25
UBP3	YER151C	AHA1	Q12449	350 aa	Known RBP	0.97	□□□□□ -2.25
UBP3	YER151C	CHO2	P05374	869 aa	Known RBP	0.96	□□□□□ -2.26
UBP3	YER151C	VAS1	P07806	1104 aa	Known RBP	0.96	□□□□□ -2.26
UBP3	YER151C	NMT1	P14743	455 aa		0.96	□□□□□ -2.26
UBP3	YER151C	PHO3	P24031	467 aa		0.96	□□□□□ -2.26
UBP3	YER151C	DPB2	P24482	689 aa	Predicted RBP	0.96	□□□□□ -2.26
UBP3	YER151C	PSO2	P30620	661 aa		0.96	□□□□□ -2.26
UBP3	YER151C	ZUO1	P32527	433 aa	Known RBP	0.96	□□□□□ -2.26
UBP3	YER151C	CDC13	P32797	924 aa	Known RBP	0.96	□□□□□ -2.26
UBP3	YER151C	SEF1	P34228	1148 aa		0.96	□□□□□ -2.26
UBP3	YER151C	SRO77	P38163	1010 aa		0.96	□□□□□ -2.26
UBP3	YER151C	RKM3	P38222	552 aa		0.96	□□□□□ -2.26
UBP3	YER151C	YBR138C	P38277	524 aa		0.96	□□□□□ -2.26
UBP3	YER151C	TRS20	P38334	175 aa		0.96	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms