RNA–Protein interactions for RNA: YDR425W

SNX41, Transcript of Sorting nexin, yeastyeast

Gene SNX41, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX41YDR425W YLR302CO13544 120 aa2.43□□□□□ -2.02
SNX41YDR425W MSS116P15424 664 aaKnown RBP2.43□□□□□ -2.02
SNX41YDR425W CBF1P17106 351 aa2.43□□□□□ -2.02
SNX41YDR425W COQ1P18900 473 aa2.43□□□□□ -2.02
SNX41YDR425W RPC53P25441 422 aa2.43□□□□□ -2.02
SNX41YDR425W PWP2P25635 923 aaKnown RBP2.43□□□□□ -2.02
SNX41YDR425W GYP6P32806 458 aa2.43□□□□□ -2.02
SNX41YDR425W YKL050CP35736 922 aa2.43□□□□□ -2.02
SNX41YDR425W PIM1P36775 1133 aa2.43□□□□□ -2.02
SNX41YDR425W STV1P37296 890 aa2.43□□□□□ -2.02
SNX41YDR425W RIM2P38127 377 aa2.43□□□□□ -2.02
SNX41YDR425W PCF11P39081 626 aaPredicted RBP2.43□□□□□ -2.02
SNX41YDR425W NPT1P39683 429 aaKnown RBP2.43□□□□□ -2.02
SNX41YDR425W SGM1P47166 707 aa2.43□□□□□ -2.02
SNX41YDR425W DRN1P53255 507 aaKnown RBP2.43□□□□□ -2.02
SNX41YDR425W TOF1P53840 1238 aa2.43□□□□□ -2.02
SNX41YDR425W APC1P53886 1748 aa2.43□□□□□ -2.02
SNX41YDR425W ATG16Q03818 150 aa2.43□□□□□ -2.02
SNX41YDR425W COA4Q05809 96 aa2.43□□□□□ -2.02
SNX41YDR425W BUG1Q12191 341 aa2.43□□□□□ -2.02
SNX41YDR425W HIF1Q12373 385 aa2.43□□□□□ -2.02
SNX41YDR425W SNU66Q12420 587 aaPredicted RBP2.43□□□□□ -2.02
SNX41YDR425W YPT6Q99260 215 aa2.43□□□□□ -2.02
SNX41YDR425W PEP5P12868 1029 aa2.42□□□□□ -2.02
SNX41YDR425W RSR1P13856 272 aa2.42□□□□□ -2.02
SNX41YDR425W GCN3P14741 305 aa2.42□□□□□ -2.02
SNX41YDR425W POL30P15873 258 aaKnown RBP2.42□□□□□ -2.02
SNX41YDR425W OM45P16547 393 aa2.42□□□□□ -2.02
SNX41YDR425W ALG1P16661 449 aa2.42□□□□□ -2.02
SNX41YDR425W FAR1P21268 830 aa2.42□□□□□ -2.02
SNX41YDR425W UBA1P22515 1024 aaKnown RBP2.42□□□□□ -2.02
SNX41YDR425W ITR2P30606 609 aa2.42□□□□□ -2.02
SNX41YDR425W MRS6P32864 603 aaKnown RBP2.42□□□□□ -2.02
SNX41YDR425W NIP100P33420 868 aa2.42□□□□□ -2.02
SNX41YDR425W TIF5P38431 405 aaKnown RBP2.42□□□□□ -2.02
SNX41YDR425W RCK2P38623 610 aa2.42□□□□□ -2.02
SNX41YDR425W LCP5P40079 357 aaPredicted RBP2.42□□□□□ -2.02
SNX41YDR425W AAD10P47182 288 aa2.42□□□□□ -2.02
SNX41YDR425W TAF6P53040 516 aa2.42□□□□□ -2.02
SNX41YDR425W LSG1P53145 640 aaKnown RBP2.42□□□□□ -2.02
SNX41YDR425W SOL4P53315 255 aa2.42□□□□□ -2.02
SNX41YDR425W RTC4P53850 401 aa2.42□□□□□ -2.02
SNX41YDR425W TMA20P89886 181 aaPredicted RBP2.42□□□□□ -2.02
SNX41YDR425W MDM1Q01846 1127 aa2.42□□□□□ -2.02
SNX41YDR425W MMT1Q03218 510 aa2.42□□□□□ -2.02
SNX41YDR425W FIN1Q03898 291 aa2.42□□□□□ -2.02
SNX41YDR425W YMR111CQ04461 462 aaPredicted RBP2.42□□□□□ -2.02
SNX41YDR425W YDR278CQ05612 105 aa2.42□□□□□ -2.02
SNX41YDR425W SKG3Q06315 1026 aa2.42□□□□□ -2.02
SNX41YDR425W YPR078CQ06813 372 aa2.42□□□□□ -2.02
SNX41YDR425W DAP1Q12091 152 aa2.42□□□□□ -2.02
SNX41YDR425W RRI2Q12348 645 aa2.42□□□□□ -2.02
SNX41YDR425W BBP1Q12365 385 aa2.42□□□□□ -2.02
SNX41YDR425W YRF1-2P40105 1681 aa2.42□□□□□ -2.02
SNX41YDR425W YLR462WO13556 202 aa2.41□□□□□ -2.02
SNX41YDR425W HIS3P06633 220 aa2.41□□□□□ -2.02
SNX41YDR425W YML002WP0CF17 737 aa2.41□□□□□ -2.02
SNX41YDR425W GLN3P18494 730 aa2.41□□□□□ -2.02
SNX41YDR425W COY1P34237 679 aa2.41□□□□□ -2.02
SNX41YDR425W TPO5P36029 618 aa2.41□□□□□ -2.02
SNX41YDR425W RCN1P36054 211 aa2.41□□□□□ -2.02
SNX41YDR425W PHD1P36093 366 aa2.41□□□□□ -2.02
SNX41YDR425W PDX3P38075 228 aaKnown RBP2.41□□□□□ -2.02
SNX41YDR425W PFF1P38244 976 aa2.41□□□□□ -2.02
SNX41YDR425W SLM4P38247 162 aa2.41□□□□□ -2.02
SNX41YDR425W YHL049CP38722 271 aa2.41□□□□□ -2.02
SNX41YDR425W TRM5P38793 499 aa2.41□□□□□ -2.02
SNX41YDR425W APE4P38821 490 aa2.41□□□□□ -2.02
SNX41YDR425W SPL2P38839 148 aa2.41□□□□□ -2.02
SNX41YDR425W AXL2P38928 823 aa2.41□□□□□ -2.02
SNX41YDR425W AST2P39945 430 aaKnown RBP2.41□□□□□ -2.02
SNX41YDR425W YEL075CP39972 122 aa2.41□□□□□ -2.02
SNX41YDR425W DSE1P40077 573 aa2.41□□□□□ -2.02
SNX41YDR425W YER189WP40104 122 aa2.41□□□□□ -2.02
SNX41YDR425W CSM2P40465 213 aa2.41□□□□□ -2.02
SNX41YDR425W DPH1P40487 425 aaKnown RBP2.41□□□□□ -2.02
SNX41YDR425W YFL064CP43540 174 aa2.41□□□□□ -2.02
SNX41YDR425W SIP4P46954 829 aa2.41□□□□□ -2.02
SNX41YDR425W ATP22P50273 684 aaPredicted RBP2.41□□□□□ -2.02
SNX41YDR425W STR3P53101 465 aaKnown RBP2.41□□□□□ -2.02
SNX41YDR425W YGR266WP53326 701 aa2.41□□□□□ -2.02
SNX41YDR425W CRZ1P53968 678 aa2.41□□□□□ -2.02
SNX41YDR425W GPI17Q04080 534 aa2.41□□□□□ -2.02
SNX41YDR425W RIX7Q07844 837 aaKnown RBP2.41□□□□□ -2.02
SNX41YDR425W UIP4Q08926 304 aa2.41□□□□□ -2.02
SNX41YDR425W TIP41Q12199 356 aa2.41□□□□□ -2.02
SNX41YDR425W SCM3Q12334 223 aa2.41□□□□□ -2.02
SNX41YDR425W ARP6Q12509 438 aa2.41□□□□□ -2.02
SNX41YDR425W YBL111CQ3E7Y5 667 aa2.41□□□□□ -2.02
SNX41YDR425W REP1P03871 373 aa2.41□□□□□ -2.02
SNX41YDR425W CMD1P06787 147 aaKnown RBP2.41□□□□□ -2.02
SNX41YDR425W HSC82P15108 705 aaKnown RBP2.41□□□□□ -2.02
SNX41YDR425W OSM1P21375 501 aaKnown RBP2.41□□□□□ -2.02
SNX41YDR425W YKL023WP36103 277 aaKnown RBP2.41□□□□□ -2.02
SNX41YDR425W ALY1P36117 915 aa2.41□□□□□ -2.02
SNX41YDR425W VHC1P38329 1120 aa2.41□□□□□ -2.02
SNX41YDR425W TSC10P38342 320 aa2.41□□□□□ -2.02
SNX41YDR425W AVT6P40074 448 aa2.41□□□□□ -2.02
SNX41YDR425W DIM1P41819 318 aaKnown RBP2.41□□□□□ -2.02
SNX41YDR425W TOS3P43637 560 aa2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms