RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP42	YDR192C	ASP3-2	P0CX77	362 aa		4.56	□□□□□ -1.68
NUP42	YDR192C	ASP3-3	P0CX78	362 aa		4.56	□□□□□ -1.68
NUP42	YDR192C	ASP3-4	P0CX79	362 aa		4.56	□□□□□ -1.68
NUP42	YDR192C	ASP3-1	P0CZ17	362 aa		4.56	□□□□□ -1.68
NUP42	YDR192C	MAS2	P11914	482 aa		4.56	□□□□□ -1.68
NUP42	YDR192C	YAP1	P19880	650 aa	Known RBP	4.56	□□□□□ -1.68
NUP42	YDR192C	MRPL25	P23369	157 aa		4.56	□□□□□ -1.68
NUP42	YDR192C	VPS3	P23643	1011 aa		4.56	□□□□□ -1.68
NUP42	YDR192C	PTP1	P25044	335 aa		4.56	□□□□□ -1.68
NUP42	YDR192C	BOS1	P25385	244 aa		4.56	□□□□□ -1.68
NUP42	YDR192C	PUP3	P25451	205 aa	Known RBP	4.56	□□□□□ -1.68
NUP42	YDR192C	YUR1	P26725	428 aa		4.56	□□□□□ -1.68
NUP42	YDR192C	GCG1	P32656	232 aa	Known RBP	4.56	□□□□□ -1.68
NUP42	YDR192C	YME1	P32795	747 aa		4.56	□□□□□ -1.68
NUP42	YDR192C	SEF1	P34228	1148 aa		4.56	□□□□□ -1.68
NUP42	YDR192C	MUM2	P38236	366 aa		4.56	□□□□□ -1.68
NUP42	YDR192C	RRT2	P38332	387 aa		4.56	□□□□□ -1.68
NUP42	YDR192C	RCK2	P38623	610 aa		4.56	□□□□□ -1.68
NUP42	YDR192C	YHR131C	P38835	850 aa		4.56	□□□□□ -1.68
NUP42	YDR192C	CCT6	P39079	546 aa		4.56	□□□□□ -1.68
NUP42	YDR192C	XBP1	P40489	647 aa		4.56	□□□□□ -1.68
NUP42	YDR192C	YIL024C	P40543	189 aa		4.56	□□□□□ -1.68
NUP42	YDR192C	INA22	P40576	216 aa		4.56	□□□□□ -1.68
NUP42	YDR192C	BNA3	P47039	444 aa	Known RBP	4.56	□□□□□ -1.68
NUP42	YDR192C	YJR054W	P47114	497 aa		4.56	□□□□□ -1.68
NUP42	YDR192C	MND1	P53102	219 aa		4.56	□□□□□ -1.68
NUP42	YDR192C	ASI1	P54074	624 aa		4.56	□□□□□ -1.68
NUP42	YDR192C	FIN1	Q03898	291 aa		4.56	□□□□□ -1.68
NUP42	YDR192C	YMR321C	Q04898	105 aa		4.56	□□□□□ -1.68
NUP42	YDR192C	ECM22	Q05958	814 aa	Predicted RBP	4.56	□□□□□ -1.68
NUP42	YDR192C	STE23	Q06010	1027 aa		4.56	□□□□□ -1.68
NUP42	YDR192C	SHS1	Q07657	551 aa		4.56	□□□□□ -1.68
NUP42	YDR192C	ABP140	Q08641	628 aa	Known RBP	4.56	□□□□□ -1.68
NUP42	YDR192C	TAF10	Q12030	206 aa		4.56	□□□□□ -1.68
NUP42	YDR192C	AVL9	Q12500	764 aa		4.56	□□□□□ -1.68
NUP42	YDR192C	YER145C-A	A0A023PYF4	145 aa		4.55	□□□□□ -1.68
NUP42	YDR192C	CKA1	P15790	372 aa		4.55	□□□□□ -1.68
NUP42	YDR192C	DAL2	P25335	343 aa		4.55	□□□□□ -1.68
NUP42	YDR192C	IMG1	P25626	169 aa		4.55	□□□□□ -1.68
NUP42	YDR192C	NPL6	P32832	435 aa		4.55	□□□□□ -1.68
NUP42	YDR192C	YBR144C	P34215	104 aa		4.55	□□□□□ -1.68
NUP42	YDR192C	YBL055C	P34220	418 aa	Predicted RBP	4.55	□□□□□ -1.68
NUP42	YDR192C	YKL100C	P34248	587 aa		4.55	□□□□□ -1.68
NUP42	YDR192C	LAS1	P36146	502 aa	Predicted RBP	4.55	□□□□□ -1.68
NUP42	YDR192C	SCO2	P38072	301 aa		4.55	□□□□□ -1.68
NUP42	YDR192C	ICS2	P38284	255 aa		4.55	□□□□□ -1.68
NUP42	YDR192C	TIF5	P38431	405 aa	Known RBP	4.55	□□□□□ -1.68
NUP42	YDR192C	YHR054C	P38780	354 aa		4.55	□□□□□ -1.68
NUP42	YDR192C	VPS41	P38959	992 aa		4.55	□□□□□ -1.68
NUP42	YDR192C	ALG5	P40350	334 aa		4.55	□□□□□ -1.68
NUP42	YDR192C	LYS20	P48570	428 aa	Known RBP	4.55	□□□□□ -1.68
NUP42	YDR192C	YGL039W	P53183	348 aa	Known RBP	4.55	□□□□□ -1.68
NUP42	YDR192C	YTP1	P53584	459 aa		4.55	□□□□□ -1.68
NUP42	YDR192C	ALG11	P53954	548 aa	Known RBP	4.55	□□□□□ -1.68
NUP42	YDR192C	CTL1	Q03220	320 aa	Known RBP	4.55	□□□□□ -1.68
NUP42	YDR192C	RRB1	Q04225	511 aa	Known RBP	4.55	□□□□□ -1.68
NUP42	YDR192C	MRPL1	Q04599	285 aa		4.55	□□□□□ -1.68
NUP42	YDR192C	IVY1	Q04934	453 aa		4.55	□□□□□ -1.68
NUP42	YDR192C	POS5	Q06892	414 aa		4.55	□□□□□ -1.68
NUP42	YDR192C	FRE3	Q08905	711 aa		4.55	□□□□□ -1.68
NUP42	YDR192C	AI5_BETA	Q9ZZX0	354 aa		4.55	□□□□□ -1.68
NUP42	YDR192C	ARG3	P05150	338 aa		4.54	□□□□□ -1.68
NUP42	YDR192C	RPB8	P20436	146 aa		4.54	□□□□□ -1.68
NUP42	YDR192C	BUD5	P25300	642 aa	Predicted RBP	4.54	□□□□□ -1.68
NUP42	YDR192C	MNN2	P38069	597 aa		4.54	□□□□□ -1.68
NUP42	YDR192C	POP4	P38336	279 aa		4.54	□□□□□ -1.68
NUP42	YDR192C	SPC97	P38863	823 aa		4.54	□□□□□ -1.68
NUP42	YDR192C	LCP5	P40079	357 aa	Predicted RBP	4.54	□□□□□ -1.68
NUP42	YDR192C	YFL040W	P43562	540 aa		4.54	□□□□□ -1.68
NUP42	YDR192C	ROK1	P45818	564 aa	Predicted RBP	4.54	□□□□□ -1.68
NUP42	YDR192C	PHO86	P46956	311 aa		4.54	□□□□□ -1.68
NUP42	YDR192C	YML6	P51998	286 aa		4.54	□□□□□ -1.68
NUP42	YDR192C	LCL3	P53153	274 aa		4.54	□□□□□ -1.68
NUP42	YDR192C	MNP1	P53163	194 aa	Predicted RBP	4.54	□□□□□ -1.68
NUP42	YDR192C	UTP6	Q02354	440 aa	Known RBP	4.54	□□□□□ -1.68
NUP42	YDR192C	TAF11	Q04226	346 aa		4.54	□□□□□ -1.68
NUP42	YDR192C	ATG26	Q06321	1198 aa		4.54	□□□□□ -1.68
NUP42	YDR192C	TEN1	Q07921	160 aa		4.54	□□□□□ -1.68
NUP42	YDR192C	DNL4	Q08387	944 aa	Predicted RBP	4.54	□□□□□ -1.68
NUP42	YDR192C	BUD7	Q08754	746 aa		4.54	□□□□□ -1.68
NUP42	YDR192C	PUT2	P07275	575 aa		4.53	□□□□□ -1.68
NUP42	YDR192C	RED1	P14291	827 aa		4.53	□□□□□ -1.68
NUP42	YDR192C	CDC42	P19073	191 aa		4.53	□□□□□ -1.68
NUP42	YDR192C	PRR1	P28708	518 aa		4.53	□□□□□ -1.68
NUP42	YDR192C	VRG4	P40107	337 aa		4.53	□□□□□ -1.68
NUP42	YDR192C	MMF1	P40185	145 aa	Known RBP	4.53	□□□□□ -1.68
NUP42	YDR192C	MET28	P40573	187 aa		4.53	□□□□□ -1.68
NUP42	YDR192C	SNZ3	P43545	298 aa		4.53	□□□□□ -1.68
NUP42	YDR192C	SNZ2	P53824	298 aa		4.53	□□□□□ -1.68
NUP42	YDR192C	MZM1	Q03429	123 aa	Predicted RBP	4.53	□□□□□ -1.68
NUP42	YDR192C	PPM1	Q04081	328 aa		4.53	□□□□□ -1.68
NUP42	YDR192C	URH1	Q04179	340 aa		4.53	□□□□□ -1.68
NUP42	YDR192C	UTP21	Q06078	939 aa	Predicted RBP	4.53	□□□□□ -1.68
NUP42	YDR192C	ECM30	Q06673	1274 aa		4.53	□□□□□ -1.68
NUP42	YDR192C	GRC3	Q07845	632 aa		4.53	□□□□□ -1.68
NUP42	YDR192C	ATX2	Q12067	313 aa		4.53	□□□□□ -1.68
NUP42	YDR192C	HSH49	Q99181	213 aa	Predicted RBP	4.53	□□□□□ -1.68
NUP42	YDR192C	GAL4	P04386	881 aa		4.52	□□□□□ -1.69
NUP42	YDR192C	PUT4	P15380	627 aa		4.52	□□□□□ -1.69
NUP42	YDR192C	PDA1	P16387	420 aa	Known RBP	4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 29.3 ms