RNA–Protein interactions for RNA: YDR120C

TRM1, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM1, Length 1,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM1YDR120C RHO2P06781 192 aa4.06□□□□□ -1.76
TRM1YDR120C SPS4P09937 338 aa4.06□□□□□ -1.76
TRM1YDR120C IDH2P28241 369 aaKnown RBP4.06□□□□□ -1.76
TRM1YDR120C URA7P28274 579 aaKnown RBP4.06□□□□□ -1.76
TRM1YDR120C YIM1P28625 365 aa4.06□□□□□ -1.76
TRM1YDR120C YTA12P40341 825 aa4.06□□□□□ -1.76
TRM1YDR120C SYG1P40528 902 aa4.06□□□□□ -1.76
TRM1YDR120C SCD6P45978 349 aaKnown RBP RIP-Chip data4.06□□□□□ -1.76not detected
TRM1YDR120C OCA1P50946 238 aaPredicted RBP4.06□□□□□ -1.76
TRM1YDR120C RSC1P53236 928 aa4.06□□□□□ -1.76
TRM1YDR120C MPS1P54199 764 aa4.06□□□□□ -1.76
TRM1YDR120C RBA50Q04418 439 aa4.06□□□□□ -1.76
TRM1YDR120C IVY1Q04934 453 aa4.06□□□□□ -1.76
TRM1YDR120C FMP42Q04991 504 aa4.06□□□□□ -1.76
TRM1YDR120C BNA5Q05979 453 aa4.06□□□□□ -1.76
TRM1YDR120C PHO92Q06390 306 aa4.06□□□□□ -1.76
TRM1YDR120C YEH2Q07950 538 aa4.06□□□□□ -1.76
TRM1YDR120C RRD2Q12461 358 aa4.06□□□□□ -1.76
TRM1YDR120C POM152P39685 1337 aa4.05□□□□□ -1.76
TRM1YDR120C UTP10P42945 1769 aaKnown RBP4.05□□□□□ -1.76
TRM1YDR120C HOM3P10869 527 aa4.05□□□□□ -1.76
TRM1YDR120C GLN3P18494 730 aa4.05□□□□□ -1.76
TRM1YDR120C SRP72P38688 640 aaKnown RBP4.05□□□□□ -1.76
TRM1YDR120C YND1P40009 630 aa4.05□□□□□ -1.76
TRM1YDR120C YML6P51998 286 aa4.05□□□□□ -1.76
TRM1YDR120C SOV1Q04748 898 aa4.05□□□□□ -1.76
TRM1YDR120C CFT2Q12102 859 aaPredicted RBP4.05□□□□□ -1.76
TRM1YDR120C ISA2Q12425 185 aa4.05□□□□□ -1.76
TRM1YDR120C CSR2Q12734 1121 aa4.05□□□□□ -1.76
TRM1YDR120C SMC6Q12749 1114 aa4.05□□□□□ -1.76
TRM1YDR120C AFI1Q99222 893 aa4.05□□□□□ -1.76
TRM1YDR120C AMD1P15274 810 aaKnown RBP4.04□□□□□ -1.76
TRM1YDR120C SEC62P21825 274 aa4.04□□□□□ -1.76
TRM1YDR120C PPZ1P26570 692 aa4.04□□□□□ -1.76
TRM1YDR120C YME2P32843 850 aa4.04□□□□□ -1.76
TRM1YDR120C PXA2P34230 853 aa4.04□□□□□ -1.76
TRM1YDR120C YIL089WP40500 205 aa4.04□□□□□ -1.76
TRM1YDR120C GPI1P53306 609 aa4.04□□□□□ -1.76
TRM1YDR120C KTR5P53966 522 aaPredicted RBP4.04□□□□□ -1.76
TRM1YDR120C SEC5P89102 971 aa4.04□□□□□ -1.76
TRM1YDR120C KAP120Q02932 1032 aa4.04□□□□□ -1.76
TRM1YDR120C SIL1Q08199 421 aa4.04□□□□□ -1.76
TRM1YDR120C KEL3Q08979 651 aaPredicted RBP4.04□□□□□ -1.76
TRM1YDR120C ICT1Q12385 394 aa4.04□□□□□ -1.76
TRM1YDR120C GLK1P17709 500 aaKnown RBP4.04□□□□□ -1.76
TRM1YDR120C ATP10P18496 279 aa4.04□□□□□ -1.76
TRM1YDR120C CLB1P24868 471 aa4.04□□□□□ -1.76
TRM1YDR120C TMT1P32643 299 aa4.04□□□□□ -1.76
TRM1YDR120C THI2P38141 450 aa4.04□□□□□ -1.76
TRM1YDR120C RRP3P38712 501 aaKnown RBP4.04□□□□□ -1.76
TRM1YDR120C POP1P41812 875 aa4.04□□□□□ -1.76
TRM1YDR120C YLL032CQ07834 825 aaKnown RBP RIP-Chip data4.04□□□□□ -1.76not detected
TRM1YDR120C PMD1P32634 1753 aa4.04□□□□□ -1.76
TRM1YDR120C GPH1P06738 902 aaKnown RBP4.03□□□□□ -1.76
TRM1YDR120C FUN19P28003 413 aaPredicted RBP4.03□□□□□ -1.76
TRM1YDR120C FRE1P32791 686 aa4.03□□□□□ -1.76
TRM1YDR120C VPS52P39904 641 aa4.03□□□□□ -1.76
TRM1YDR120C URB2P47108 1174 aa4.03□□□□□ -1.76
TRM1YDR120C FMS1P50264 508 aa4.03□□□□□ -1.76
TRM1YDR120C CUL3P53202 744 aa4.03□□□□□ -1.76
TRM1YDR120C TRM44Q02648 567 aaKnown RBP4.03□□□□□ -1.76
TRM1YDR120C RRP45Q05636 305 aaKnown RBP4.03□□□□□ -1.76
TRM1YDR120C SYO1Q07395 620 aa4.03□□□□□ -1.76
TRM1YDR120C NRT1Q08485 598 aa4.03□□□□□ -1.76
TRM1YDR120C RKM5Q12367 367 aa4.03□□□□□ -1.76
TRM1YDR120C FAS2P19097 1887 aaKnown RBP4.03□□□□□ -1.76
TRM1YDR120C CDC23P16522 626 aa4.02□□□□□ -1.77
TRM1YDR120C GYP6P32806 458 aa4.02□□□□□ -1.77
TRM1YDR120C TRS65P32893 560 aa4.02□□□□□ -1.77
TRM1YDR120C YNK1P36010 153 aaKnown RBP4.02□□□□□ -1.77
TRM1YDR120C BZZ1P38822 633 aa4.02□□□□□ -1.77
TRM1YDR120C RMD9P53140 646 aaKnown RBP4.02□□□□□ -1.77
TRM1YDR120C DON1Q05610 365 aa4.02□□□□□ -1.77
TRM1YDR120C LSP1Q12230 341 aaKnown RBP4.02□□□□□ -1.77
TRM1YDR120C RIP1P08067 215 aa4.01□□□□□ -1.77
TRM1YDR120C ERV1P27882 189 aa4.01□□□□□ -1.77
TRM1YDR120C NIP100P33420 868 aa4.01□□□□□ -1.77
TRM1YDR120C SIP2P34164 415 aaKnown RBP4.01□□□□□ -1.77
TRM1YDR120C PIM1P36775 1133 aa4.01□□□□□ -1.77
TRM1YDR120C FAU1P40099 211 aa4.01□□□□□ -1.77
TRM1YDR120C DIM1P41819 318 aaKnown RBP4.01□□□□□ -1.77
TRM1YDR120C TFG2P41896 400 aaPredicted RBP4.01□□□□□ -1.77
TRM1YDR120C COS5P47187 383 aa4.01□□□□□ -1.77
TRM1YDR120C TCB2P48231 1178 aa4.01□□□□□ -1.77
TRM1YDR120C RLI1Q03195 608 aaKnown RBP4.01□□□□□ -1.77
TRM1YDR120C NUP53Q03790 475 aa4.01□□□□□ -1.77
TRM1YDR120C AIM32Q04689 311 aa4.01□□□□□ -1.77
TRM1YDR120C COS7Q07788 383 aa4.01□□□□□ -1.77
TRM1YDR120C YDL009CQ12210 107 aa4.01□□□□□ -1.77
TRM1YDR120C FIG2P25653 1609 aa4.01□□□□□ -1.77
TRM1YDR120C HPR1P17629 752 aaKnown RBP4.01□□□□□ -1.77
TRM1YDR120C SEC1P30619 724 aaKnown RBP4.01□□□□□ -1.77
TRM1YDR120C TFB1P32776 642 aa4.01□□□□□ -1.77
TRM1YDR120C ARA1P38115 344 aa4.01□□□□□ -1.77
TRM1YDR120C RIM2P38127 377 aa4.01□□□□□ -1.77
TRM1YDR120C NTC20P38302 140 aaPredicted RBP4.01□□□□□ -1.77
TRM1YDR120C ZIM17P42844 174 aa4.01□□□□□ -1.77
TRM1YDR120C CAK1P43568 368 aaPredicted RBP4.01□□□□□ -1.77
TRM1YDR120C YGL138CP53122 345 aa4.01□□□□□ -1.77
TRM1YDR120C MRPL51Q06090 140 aaPredicted RBP4.01□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms