RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C MRK1P50873 501 aa2.04□□□□□ -2.08
BRE1YDL074C SLD3P53135 668 aa2.04□□□□□ -2.08
BRE1YDL074C NQM1P53228 333 aaPredicted RBP2.04□□□□□ -2.08
BRE1YDL074C YGR054WP53235 642 aaKnown RBP2.04□□□□□ -2.08
BRE1YDL074C PEX13P80667 386 aa2.04□□□□□ -2.08
BRE1YDL074C RNY1Q02933 434 aaKnown RBP2.04□□□□□ -2.08
BRE1YDL074C TLG1Q03322 224 aa2.04□□□□□ -2.08
BRE1YDL074C GRX3Q03835 250 aa2.04□□□□□ -2.08
BRE1YDL074C ARX1Q03862 593 aaKnown RBP2.04□□□□□ -2.08
BRE1YDL074C EMI2Q04409 500 aaKnown RBP2.04□□□□□ -2.08
BRE1YDL074C GAL83Q04739 417 aa2.04□□□□□ -2.08
BRE1YDL074C FMP42Q04991 504 aa2.04□□□□□ -2.08
BRE1YDL074C YMR034CQ05131 434 aaPredicted RBP2.04□□□□□ -2.08
BRE1YDL074C NEJ1Q06148 342 aa2.04□□□□□ -2.08
BRE1YDL074C VPS74Q06385 345 aa2.04□□□□□ -2.08
BRE1YDL074C YDL114WQ07530 308 aa2.04□□□□□ -2.08
BRE1YDL074C XYL2Q07993 356 aa2.04□□□□□ -2.08
BRE1YDL074C PUS7Q08647 676 aaKnown RBP2.04□□□□□ -2.08
BRE1YDL074C TRM8Q12009 286 aa2.04□□□□□ -2.08
BRE1YDL074C TRM10Q12400 293 aa2.04□□□□□ -2.08
BRE1YDL074C YDL199CQ12407 687 aa2.04□□□□□ -2.08
BRE1YDL074C MPD2Q99316 277 aa2.04□□□□□ -2.08
BRE1YDL074C STE7P06784 515 aa2.03□□□□□ -2.08
BRE1YDL074C CDC21P06785 304 aa2.03□□□□□ -2.08
BRE1YDL074C COR1P07256 457 aa2.03□□□□□ -2.08
BRE1YDL074C LEU1P07264 779 aaKnown RBP2.03□□□□□ -2.08
BRE1YDL074C TY2A-LR1P0C2J4 438 aa2.03□□□□□ -2.08
BRE1YDL074C TY2A-FP0CX61 438 aa2.03□□□□□ -2.08
BRE1YDL074C TY2A-GR2P0CX62 438 aa2.03□□□□□ -2.08
BRE1YDL074C DAP2P18962 818 aa2.03□□□□□ -2.08
BRE1YDL074C KIN3P22209 435 aa2.03□□□□□ -2.08
BRE1YDL074C RRP7P25368 297 aaPredicted RBP2.03□□□□□ -2.08
BRE1YDL074C TY2A-CP25383 438 aa2.03□□□□□ -2.08
BRE1YDL074C PPZ1P26570 692 aa2.03□□□□□ -2.08
BRE1YDL074C CYS4P32582 507 aaKnown RBP2.03□□□□□ -2.08
BRE1YDL074C STE14P32584 239 aa2.03□□□□□ -2.08
BRE1YDL074C PET127P32606 800 aa2.03□□□□□ -2.08
BRE1YDL074C NPL6P32832 435 aa2.03□□□□□ -2.08
BRE1YDL074C MRT4P33201 236 aaKnown RBP2.03□□□□□ -2.08
BRE1YDL074C SPO23P33757 523 aa2.03□□□□□ -2.08
BRE1YDL074C GMH1P36125 273 aa2.03□□□□□ -2.08
BRE1YDL074C COS111P38308 924 aa2.03□□□□□ -2.08
BRE1YDL074C YBR285WP38354 144 aa2.03□□□□□ -2.08
BRE1YDL074C YHR127WP38833 243 aaKnown RBP2.03□□□□□ -2.08
BRE1YDL074C MTW1P39731 289 aa2.03□□□□□ -2.08
BRE1YDL074C DOT6P40059 670 aaKnown RBP2.03□□□□□ -2.08
BRE1YDL074C RTT105P40063 208 aa2.03□□□□□ -2.08
BRE1YDL074C BUR6P40096 142 aa2.03□□□□□ -2.08
BRE1YDL074C YJL068CP40363 299 aa2.03□□□□□ -2.08
BRE1YDL074C FAF1P40546 346 aaPredicted RBP2.03□□□□□ -2.08
BRE1YDL074C MAD2P40958 196 aa2.03□□□□□ -2.08
BRE1YDL074C OYE3P41816 400 aaPredicted RBP2.03□□□□□ -2.08
BRE1YDL074C YPT32P51996 222 aaKnown RBP2.03□□□□□ -2.08
BRE1YDL074C YGR168CP53293 376 aa2.03□□□□□ -2.08
BRE1YDL074C OAZ1Q02803 292 aa2.03□□□□□ -2.08
BRE1YDL074C PNG1Q02890 363 aa2.03□□□□□ -2.08
BRE1YDL074C GIP3Q03016 1276 aa2.03□□□□□ -2.08
BRE1YDL074C MET31Q03081 177 aa2.03□□□□□ -2.08
BRE1YDL074C TY2A-DR2Q03483 438 aa2.03□□□□□ -2.08
BRE1YDL074C YDR179W-AQ03983 463 aa2.03□□□□□ -2.08
BRE1YDL074C DTD1Q07648 150 aaKnown RBP2.03□□□□□ -2.08
BRE1YDL074C YEH1Q07804 573 aa2.03□□□□□ -2.08
BRE1YDL074C YOR387CQ08910 206 aa2.03□□□□□ -2.08
BRE1YDL074C YPR011CQ12251 326 aa2.03□□□□□ -2.08
BRE1YDL074C TY2A-BQ12260 438 aa2.03□□□□□ -2.08
BRE1YDL074C TY2A-OR2Q12293 438 aa2.03□□□□□ -2.08
BRE1YDL074C RGT2Q12300 763 aa2.03□□□□□ -2.08
BRE1YDL074C TY2A-DR1Q12392 438 aa2.03□□□□□ -2.08
BRE1YDL074C PDH1Q12428 516 aaKnown RBP2.03□□□□□ -2.08
BRE1YDL074C TY2A-OR1Q12439 438 aa2.03□□□□□ -2.08
BRE1YDL074C TY2A-DR3Q99303 438 aa2.03□□□□□ -2.08
BRE1YDL074C STT4P37297 1900 aa2.03□□□□□ -2.08
BRE1YDL074C UNG1P12887 359 aa2.03□□□□□ -2.08
BRE1YDL074C FPR1P20081 114 aaKnown RBP2.03□□□□□ -2.08
BRE1YDL074C IDP1P21954 428 aaKnown RBP2.03□□□□□ -2.08
BRE1YDL074C RSC6P25632 483 aa2.03□□□□□ -2.08
BRE1YDL074C UBC8P28263 218 aa2.03□□□□□ -2.08
BRE1YDL074C YJU3P28321 313 aa2.03□□□□□ -2.08
BRE1YDL074C PTP2P29461 750 aa2.03□□□□□ -2.08
BRE1YDL074C SAC1P32368 623 aaKnown RBP2.03□□□□□ -2.08
BRE1YDL074C SFP1P32432 683 aa2.03□□□□□ -2.08
BRE1YDL074C HXT4P32467 576 aa2.03□□□□□ -2.08
BRE1YDL074C PRP19P32523 503 aaKnown RBP2.03□□□□□ -2.08
BRE1YDL074C CAT2P32796 670 aaKnown RBP2.03□□□□□ -2.08
BRE1YDL074C LOT5P34234 306 aa2.03□□□□□ -2.08
BRE1YDL074C ATG14P38270 344 aa2.03□□□□□ -2.08
BRE1YDL074C AMN1P38285 549 aaPredicted RBP2.03□□□□□ -2.08
BRE1YDL074C INM1P38710 295 aa2.03□□□□□ -2.08
BRE1YDL074C YHR112CP38716 378 aa2.03□□□□□ -2.08
BRE1YDL074C YHR078WP38799 552 aa2.03□□□□□ -2.08
BRE1YDL074C YPT35P38815 214 aaKnown RBP2.03□□□□□ -2.08
BRE1YDL074C EGD2P38879 174 aaKnown RBP2.03□□□□□ -2.08
BRE1YDL074C HXT6P39003 570 aaKnown RBP2.03□□□□□ -2.08
BRE1YDL074C HXT7P39004 570 aa2.03□□□□□ -2.08
BRE1YDL074C PCF11P39081 626 aaPredicted RBP2.03□□□□□ -2.08
BRE1YDL074C KRE29P40026 464 aa2.03□□□□□ -2.08
BRE1YDL074C LSM5P40089 93 aaKnown RBP2.03□□□□□ -2.08
BRE1YDL074C NTA1P40354 457 aa2.03□□□□□ -2.08
BRE1YDL074C YRB2P40517 327 aa2.03□□□□□ -2.08
BRE1YDL074C PSA1P41940 361 aaKnown RBP2.03□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms