RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 DEF6Q9H4E7 631 aa18.67■□□□□ 0.58
PHGDH-223ENST00000641597 ZHX3Q9H4I2 956 aa18.67■□□□□ 0.58
PHGDH-223ENST00000641597 PSTPIP2Q9H939 334 aa18.67■□□□□ 0.58
PHGDH-223ENST00000641597 STK17AQ9UEE5 414 aa18.67■□□□□ 0.58
PHGDH-223ENST00000641597 FAM170AA1A519 330 aa18.66■□□□□ 0.58
PHGDH-223ENST00000641597 POTEB2H3BUK9 544 aa18.66■□□□□ 0.58
PHGDH-223ENST00000641597 TRAF5O00463 557 aa18.66■□□□□ 0.58
PHGDH-223ENST00000641597 SLC1A4P43007 532 aa18.66■□□□□ 0.58
PHGDH-223ENST00000641597 MAN2A1Q16706 1144 aa18.66■□□□□ 0.58
PHGDH-223ENST00000641597 SEPT12Q8IYM1 358 aa18.66■□□□□ 0.58
PHGDH-223ENST00000641597 CCDC170Q8IYT3 715 aa18.66■□□□□ 0.58
PHGDH-223ENST00000641597 GUF1Q8N442 669 aaKnown RBP18.66■□□□□ 0.58
PHGDH-223ENST00000641597 TBC1D22AQ8WUA7 517 aa18.66■□□□□ 0.58
PHGDH-223ENST00000641597 GJD4Q96KN9 370 aaPredicted RBP18.66■□□□□ 0.58
PHGDH-223ENST00000641597 PCDHA12Q9UN75 941 aa18.66■□□□□ 0.58
PHGDH-223ENST00000641597 MEIS1O00470 390 aa18.66■□□□□ 0.58
PHGDH-223ENST00000641597 SMARCA1P28370 1054 aa18.66■□□□□ 0.58
PHGDH-223ENST00000641597 CLK2P49760 499 aaKnown RBP18.66■□□□□ 0.58
PHGDH-223ENST00000641597 SLC7A5Q01650 507 aa18.66■□□□□ 0.58
PHGDH-223ENST00000641597 RASSF7Q02833 373 aa18.66■□□□□ 0.58
PHGDH-223ENST00000641597 DBNDD1Q9H9R9 158 aa18.66■□□□□ 0.58
PHGDH-223ENST00000641597 PVALEFA0A1B0GWK0 134 aa18.65■□□□□ 0.58
PHGDH-223ENST00000641597 APOBEC3HQ6NTF7 200 aaKnown RBP18.65■□□□□ 0.58
PHGDH-223ENST00000641597 CREG2Q8IUH2 290 aa18.65■□□□□ 0.58
PHGDH-223ENST00000641597 PANK4Q9NVE7 773 aa18.65■□□□□ 0.58
PHGDH-223ENST00000641597 POTEFA5A3E0 1075 aa18.65■□□□□ 0.58
PHGDH-223ENST00000641597 TLR2O60603 784 aa18.65■□□□□ 0.58
PHGDH-223ENST00000641597 POTEIP0CG38 1075 aa18.65■□□□□ 0.58
PHGDH-223ENST00000641597 FAM193AP78312 1265 aa18.65■□□□□ 0.58
PHGDH-223ENST00000641597 WDR93Q6P2C0 686 aa18.65■□□□□ 0.58
PHGDH-223ENST00000641597 FOXR1Q6PIV2 292 aa18.65■□□□□ 0.58
PHGDH-223ENST00000641597 POTEGQ6S5H5 508 aa18.65■□□□□ 0.58
PHGDH-223ENST00000641597 POTEEQ6S8J3 1075 aa18.65■□□□□ 0.58
PHGDH-223ENST00000641597 SLF2Q8IX21 1173 aa18.65■□□□□ 0.58
PHGDH-223ENST00000641597 CUL5Q93034 780 aa18.65■□□□□ 0.58
PHGDH-223ENST00000641597 MTMR8Q96EF0 704 aa18.65■□□□□ 0.58
PHGDH-223ENST00000641597 SH2D4AQ9H788 454 aa18.65■□□□□ 0.58
PHGDH-223ENST00000641597 A0A1W2PQJ5 194 aa18.64■□□□□ 0.57
PHGDH-223ENST00000641597 CCDC66A2RUB6 948 aa18.64■□□□□ 0.57
PHGDH-223ENST00000641597 HOXA10P31260 410 aaPredicted RBP18.64■□□□□ 0.57
PHGDH-223ENST00000641597 NT5C2P49902 561 aa18.64■□□□□ 0.57
PHGDH-223ENST00000641597 CASP5P51878 434 aa18.64■□□□□ 0.57
PHGDH-223ENST00000641597 PSMC6P62333 389 aa18.64■□□□□ 0.57
PHGDH-223ENST00000641597 PDIA5Q14554 519 aa18.64■□□□□ 0.57
PHGDH-223ENST00000641597 QRICH1Q2TAL8 776 aa18.64■□□□□ 0.57
PHGDH-223ENST00000641597 KIAA0825Q8IV33 1275 aa18.64■□□□□ 0.57
PHGDH-223ENST00000641597 ZNF219Q9P2Y4 722 aaPredicted RBP18.64■□□□□ 0.57
PHGDH-223ENST00000641597 DMGDHQ9UI17 866 aaKnown RBP18.64■□□□□ 0.57
PHGDH-223ENST00000641597 UBR3Q6ZT12 1888 aa18.64■□□□□ 0.57
PHGDH-223ENST00000641597 THSD7AQ9UPZ6 1657 aa18.64■□□□□ 0.57
PHGDH-223ENST00000641597 ZBTB5O15062 677 aa18.64■□□□□ 0.57
PHGDH-223ENST00000641597 NOL4O94818 638 aa18.64■□□□□ 0.57
PHGDH-223ENST00000641597 FIGNQ5HY92 759 aa18.64■□□□□ 0.57
PHGDH-223ENST00000641597 MYOCDQ8IZQ8 938 aa18.64■□□□□ 0.57
PHGDH-223ENST00000641597 MS4A14Q96JA4 679 aa18.64■□□□□ 0.57
PHGDH-223ENST00000641597 ZC3H12CQ9C0D7 883 aaKnown RBP18.64■□□□□ 0.57
PHGDH-223ENST00000641597 PLIN4Q96Q06 1357 aa18.64■□□□□ 0.57
PHGDH-223ENST00000641597 SMCHD1A6NHR9 2005 aa18.63■□□□□ 0.57
PHGDH-223ENST00000641597 DDTLA6NHG4 134 aaPredicted RBP18.63■□□□□ 0.57
PHGDH-223ENST00000641597 MED24O75448 989 aa18.63■□□□□ 0.57
PHGDH-223ENST00000641597 TRIM37O94972 964 aa18.63■□□□□ 0.57
PHGDH-223ENST00000641597 ZCWPW2Q504Y3 356 aa18.63■□□□□ 0.57
PHGDH-223ENST00000641597 TDRD12Q587J7 1177 aaKnown RBP18.63■□□□□ 0.57
PHGDH-223ENST00000641597 FAM26FQ5R3K3 315 aa18.63■□□□□ 0.57
PHGDH-223ENST00000641597 HGSNATQ68CP4 663 aa18.63■□□□□ 0.57
PHGDH-223ENST00000641597 CACNA2D4Q7Z3S7 1137 aa18.63■□□□□ 0.57
PHGDH-223ENST00000641597 LRRC1Q9BTT6 524 aa18.63■□□□□ 0.57
PHGDH-223ENST00000641597 FOCADQ5VW36 1801 aa18.63■□□□□ 0.57
PHGDH-223ENST00000641597 ARFGEF1Q9Y6D6 1849 aa18.63■□□□□ 0.57
PHGDH-223ENST00000641597 MYH4Q9Y623 1939 aa18.63■□□□□ 0.57
PHGDH-223ENST00000641597 EEF2P13639 858 aaKnown RBP18.63■□□□□ 0.57
PHGDH-223ENST00000641597 PTPROQ16827 1216 aa18.63■□□□□ 0.57
PHGDH-223ENST00000641597 CCDC40Q4G0X9 1142 aa18.63■□□□□ 0.57
PHGDH-223ENST00000641597 CERS3Q8IU89 383 aa18.63■□□□□ 0.57
PHGDH-223ENST00000641597 IKZF4Q9H2S9 585 aa18.63■□□□□ 0.57
PHGDH-223ENST00000641597 SNX12Q9UMY4 172 aa18.63■□□□□ 0.57
PHGDH-223ENST00000641597 PCDHA1Q9Y5I3 950 aa18.63■□□□□ 0.57
PHGDH-223ENST00000641597 SYF2O95926 243 aaKnown RBP18.62■□□□□ 0.57
PHGDH-223ENST00000641597 HNRNPH3P31942 346 aaKnown RBP18.62■□□□□ 0.57
PHGDH-223ENST00000641597 POLR2FP61218 127 aaKnown RBP18.62■□□□□ 0.57
PHGDH-223ENST00000641597 USH1GQ495M9 461 aa18.62■□□□□ 0.57
PHGDH-223ENST00000641597 COBLL1Q53SF7 1204 aa18.62■□□□□ 0.57
PHGDH-223ENST00000641597 PPP4R3AQ6IN85 833 aa18.62■□□□□ 0.57
PHGDH-223ENST00000641597 GPBP1Q86WP2 473 aa18.62■□□□□ 0.57
PHGDH-223ENST00000641597 RAB34Q9BZG1 259 aa18.62■□□□□ 0.57
PHGDH-223ENST00000641597 PACSIN2Q9UNF0 486 aaPredicted RBP18.62■□□□□ 0.57
PHGDH-223ENST00000641597 GDF11O95390 407 aa18.62■□□□□ 0.57
PHGDH-223ENST00000641597 MAGEA1P43355 309 aa18.62■□□□□ 0.57
PHGDH-223ENST00000641597 ZSCAN26Q16670 478 aa18.62■□□□□ 0.57
PHGDH-223ENST00000641597 HERC4Q5GLZ8 1057 aaPredicted RBP18.62■□□□□ 0.57
PHGDH-223ENST00000641597 SCFD1Q8WVM8 642 aa18.62■□□□□ 0.57
PHGDH-223ENST00000641597 ZC3H4Q9UPT8 1303 aaKnown RBP18.62■□□□□ 0.57
PHGDH-223ENST00000641597 PLA2G4BP0C869 781 aa18.61■□□□□ 0.57
PHGDH-223ENST00000641597 CDK17Q00537 523 aa18.61■□□□□ 0.57
PHGDH-223ENST00000641597 LRRC63Q05C16 580 aa18.61■□□□□ 0.57
PHGDH-223ENST00000641597 SKIDA1Q1XH10 827 aa18.61■□□□□ 0.57
PHGDH-223ENST00000641597 ARSHQ5FYA8 562 aa18.61■□□□□ 0.57
PHGDH-223ENST00000641597 PDXDC1Q6P996 788 aa18.61■□□□□ 0.57
PHGDH-223ENST00000641597 ZNF662Q6ZS27 426 aa18.61■□□□□ 0.57
PHGDH-223ENST00000641597 EHBP1Q8NDI1 1231 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms