RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	NTSR2	O95665	410 aa		7.88	□□□□□ -1.15
CASC19-238	ENST00000641523	GPT	P24298	496 aa		7.88	□□□□□ -1.15
CASC19-238	ENST00000641523	SLC7A5	Q01650	507 aa		7.88	□□□□□ -1.15
CASC19-238	ENST00000641523	GORAB	Q5T7V8	394 aa		7.88	□□□□□ -1.15
CASC19-238	ENST00000641523	PRAMEF13	Q5VWM6	474 aa		7.88	□□□□□ -1.15
CASC19-238	ENST00000641523	C2CD4A	Q8NCU7	369 aa	Predicted RBP	7.88	□□□□□ -1.15
CASC19-238	ENST00000641523	JDP2	Q8WYK2	163 aa		7.88	□□□□□ -1.15
CASC19-238	ENST00000641523	CRAMP1	Q96RY5	1269 aa		7.88	□□□□□ -1.15
CASC19-238	ENST00000641523	GSX1	Q9H4S2	264 aa	Predicted RBP	7.88	□□□□□ -1.15
CASC19-238	ENST00000641523	METTL14	Q9HCE5	456 aa	Known RBP	7.88	□□□□□ -1.15
CASC19-238	ENST00000641523	DBF4	Q9UBU7	674 aa	Predicted RBP	7.88	□□□□□ -1.15
CASC19-238	ENST00000641523	ZNF214	Q9UL59	606 aa	Predicted RBP	7.88	□□□□□ -1.15
CASC19-238	ENST00000641523	LAS1L	Q9Y4W2	734 aa	Known RBP	7.88	□□□□□ -1.15
CASC19-238	ENST00000641523	ABCC12	Q96J65	1359 aa		7.87	□□□□□ -1.15
CASC19-238	ENST00000641523	TIAM2	Q8IVF5	1701 aa		7.87	□□□□□ -1.15
CASC19-238	ENST00000641523	hCG_2014768	A0A024R1R8	64 aa		7.87	□□□□□ -1.15
CASC19-238	ENST00000641523		F8W735	103 aa	Predicted RBP	7.87	□□□□□ -1.15
CASC19-238	ENST00000641523	UBOX5	O94941	541 aa		7.87	□□□□□ -1.15
CASC19-238	ENST00000641523	PRELP	P51888	382 aa		7.87	□□□□□ -1.15
CASC19-238	ENST00000641523	GNAI1	P63096	354 aa		7.87	□□□□□ -1.15
CASC19-238	ENST00000641523	SQSTM1	Q13501	440 aa		7.87	□□□□□ -1.15
CASC19-238	ENST00000641523	PTPRO	Q16827	1216 aa		7.87	□□□□□ -1.15
CASC19-238	ENST00000641523	SUSD4	Q5VX71	490 aa		7.87	□□□□□ -1.15
CASC19-238	ENST00000641523	EEPD1	Q7L9B9	569 aa		7.87	□□□□□ -1.15
CASC19-238	ENST00000641523	ST13P5	Q8NFI4	369 aa	Predicted RBP	7.87	□□□□□ -1.15
CASC19-238	ENST00000641523	XAGE3	Q8WTP9	111 aa		7.87	□□□□□ -1.15
CASC19-238	ENST00000641523	CCDC74B	Q96LY2	380 aa		7.87	□□□□□ -1.15
CASC19-238	ENST00000641523	SLC6A18	Q96N87	628 aa		7.87	□□□□□ -1.15
CASC19-238	ENST00000641523	VPS33B	Q9H267	617 aa		7.87	□□□□□ -1.15
CASC19-238	ENST00000641523	IFT57	Q9NWB7	429 aa		7.87	□□□□□ -1.15
CASC19-238	ENST00000641523	HYPK	Q9NX55	129 aa		7.87	□□□□□ -1.15
CASC19-238	ENST00000641523	UBN2	Q6ZU65	1347 aa		7.87	□□□□□ -1.15
CASC19-238	ENST00000641523	SLX4	Q8IY92	1834 aa		7.87	□□□□□ -1.15
CASC19-238	ENST00000641523	WDR90	Q96KV7	1748 aa		7.86	□□□□□ -1.15
CASC19-238	ENST00000641523	CDC45	O75419	566 aa		7.86	□□□□□ -1.15
CASC19-238	ENST00000641523	CST3	P01034	146 aa	Predicted RBP	7.86	□□□□□ -1.15
CASC19-238	ENST00000641523	TP53	P04637	393 aa	Predicted RBP	7.86	□□□□□ -1.15
CASC19-238	ENST00000641523	GBP1	P32455	592 aa		7.86	□□□□□ -1.15
CASC19-238	ENST00000641523	IARS	P41252	1262 aa	Known RBP	7.86	□□□□□ -1.15
CASC19-238	ENST00000641523	IGBP1	P78318	339 aa		7.86	□□□□□ -1.15
CASC19-238	ENST00000641523	SSRP1	Q08945	709 aa	Known RBP	7.86	□□□□□ -1.15
CASC19-238	ENST00000641523	PRRT3	Q5FWE3	981 aa		7.86	□□□□□ -1.15
CASC19-238	ENST00000641523	SLC10A5	Q5PT55	438 aa		7.86	□□□□□ -1.15
CASC19-238	ENST00000641523	TDRD10	Q5VZ19	366 aa	Known RBP	7.86	□□□□□ -1.15
CASC19-238	ENST00000641523	COPS6	Q7L5N1	327 aa		7.86	□□□□□ -1.15
CASC19-238	ENST00000641523	PPFIBP1	Q86W92	1011 aa		7.86	□□□□□ -1.15
CASC19-238	ENST00000641523	SMYD4	Q8IYR2	804 aa	Predicted RBP	7.86	□□□□□ -1.15
CASC19-238	ENST00000641523	TMEM130	Q8N3G9	435 aa		7.86	□□□□□ -1.15
CASC19-238	ENST00000641523	KCT2	Q8NC54	265 aa		7.86	□□□□□ -1.15
CASC19-238	ENST00000641523	PLBD2	Q8NHP8	589 aa		7.86	□□□□□ -1.15
CASC19-238	ENST00000641523	SH3TC1	Q8TE82	1336 aa		7.86	□□□□□ -1.15
CASC19-238	ENST00000641523	NUP98	P52948	1817 aa		7.86	□□□□□ -1.15
CASC19-238	ENST00000641523	DICER1	Q9UPY3	1922 aa	Known RBP	7.86	□□□□□ -1.15
CASC19-238	ENST00000641523	SUSD5	O60279	629 aa		7.85	□□□□□ -1.15
CASC19-238	ENST00000641523	PARN	O95453	639 aa	Known RBP	7.85	□□□□□ -1.15
CASC19-238	ENST00000641523	AIMP1	Q12904	312 aa	Known RBP	7.85	□□□□□ -1.15
CASC19-238	ENST00000641523	TCIRG1	Q13488	830 aa		7.85	□□□□□ -1.15
CASC19-238	ENST00000641523	PROSER3	Q2NL68	480 aa		7.85	□□□□□ -1.15
CASC19-238	ENST00000641523	PLEKHG4	Q58EX7	1191 aa		7.85	□□□□□ -1.15
CASC19-238	ENST00000641523	ANKRD34A	Q69YU3	496 aa		7.85	□□□□□ -1.15
CASC19-238	ENST00000641523	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	7.85	□□□□□ -1.15
CASC19-238	ENST00000641523	SUPT20H	Q8NEM7	779 aa		7.85	□□□□□ -1.15
CASC19-238	ENST00000641523	THAP3	Q8WTV1	239 aa	Predicted RBP	7.85	□□□□□ -1.15
CASC19-238	ENST00000641523	APPBP2	Q92624	585 aa		7.85	□□□□□ -1.15
CASC19-238	ENST00000641523	ZNF277	Q9NRM2	450 aa	Predicted RBP	7.85	□□□□□ -1.15
CASC19-238	ENST00000641523	CHPF2	Q9P2E5	772 aa		7.85	□□□□□ -1.15
CASC19-238	ENST00000641523	CNTNAP5	Q8WYK1	1306 aa		7.84	□□□□□ -1.15
CASC19-238	ENST00000641523	APAF1	O14727	1248 aa		7.84	□□□□□ -1.15
CASC19-238	ENST00000641523	BBOX1	O75936	387 aa		7.84	□□□□□ -1.15
CASC19-238	ENST00000641523	DDN	O94850	711 aa	Predicted RBP	7.84	□□□□□ -1.15
CASC19-238	ENST00000641523	CCNF	P41002	786 aa		7.84	□□□□□ -1.15
CASC19-238	ENST00000641523	PREP	P48147	710 aa		7.84	□□□□□ -1.15
CASC19-238	ENST00000641523	PMS1	P54277	932 aa	Known RBP	7.84	□□□□□ -1.15
CASC19-238	ENST00000641523	SLC10A6	Q3KNW5	377 aa		7.84	□□□□□ -1.15
CASC19-238	ENST00000641523	C2orf27A	Q580R0	203 aa		7.84	□□□□□ -1.15
CASC19-238	ENST00000641523	DUSP27	Q5VZP5	1158 aa		7.84	□□□□□ -1.15
CASC19-238	ENST00000641523	DDX46	Q7L014	1031 aa	Known RBP	7.84	□□□□□ -1.15
CASC19-238	ENST00000641523	PNMA8A	Q86V59	439 aa	Predicted RBP	7.84	□□□□□ -1.15
CASC19-238	ENST00000641523	NLRP10	Q86W26	655 aa		7.84	□□□□□ -1.15
CASC19-238	ENST00000641523	LDHD	Q86WU2	507 aa		7.84	□□□□□ -1.15
CASC19-238	ENST00000641523	HOMER1	Q86YM7	354 aa		7.84	□□□□□ -1.15
CASC19-238	ENST00000641523	GPC2	Q8N158	579 aa		7.84	□□□□□ -1.15
CASC19-238	ENST00000641523	SYNE4	Q8N205	404 aa		7.84	□□□□□ -1.15
CASC19-238	ENST00000641523	DHRS1	Q96LJ7	313 aa		7.84	□□□□□ -1.15
CASC19-238	ENST00000641523	FOXQ1	Q9C009	403 aa		7.84	□□□□□ -1.15
CASC19-238	ENST00000641523	TMEM260	Q9NX78	707 aa		7.84	□□□□□ -1.15
CASC19-238	ENST00000641523	SUCO	Q9UBS9	1254 aa	Known RBP	7.84	□□□□□ -1.15
CASC19-238	ENST00000641523	TRMT112	Q9UI30	125 aa	Known RBP	7.84	□□□□□ -1.15
CASC19-238	ENST00000641523		C9IYK1	514 aa		7.84	□□□□□ -1.15
CASC19-238	ENST00000641523	FZD9	O00144	591 aa		7.84	□□□□□ -1.15
CASC19-238	ENST00000641523	PIK3R2	O00459	728 aa		7.84	□□□□□ -1.15
CASC19-238	ENST00000641523	DDX58	O95786	925 aa	Known RBP	7.84	□□□□□ -1.15
CASC19-238	ENST00000641523	ANXA1	P04083	346 aa		7.84	□□□□□ -1.15
CASC19-238	ENST00000641523	ZNF853	P0CG23	659 aa		7.84	□□□□□ -1.15
CASC19-238	ENST00000641523	RAB6A	P20340	208 aa		7.84	□□□□□ -1.15
CASC19-238	ENST00000641523	CAP2	P40123	477 aa		7.84	□□□□□ -1.15
CASC19-238	ENST00000641523	JMY	Q8N9B5	988 aa		7.84	□□□□□ -1.15
CASC19-238	ENST00000641523	CYB5D2	Q8WUJ1	264 aa		7.84	□□□□□ -1.15
CASC19-238	ENST00000641523	ZNF512B	Q96KM6	892 aa	Predicted RBP	7.84	□□□□□ -1.15
CASC19-238	ENST00000641523	AKTIP	Q9H8T0	292 aa		7.84	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms