RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 MTMR1Q13613 665 aa15.03■□□□□ -0
GTF3A-209ENST00000640289 GNL2Q13823 731 aaKnown RBP15.03■□□□□ -0
GTF3A-209ENST00000640289 GNPTABQ3T906 1256 aa15.03■□□□□ -0
GTF3A-209ENST00000640289 TLK2Q86UE8 772 aa15.03■□□□□ -0
GTF3A-209ENST00000640289 GPRASP2Q96D09 838 aa15.03■□□□□ -0
GTF3A-209ENST00000640289 UIMC1Q96RL1 719 aa15.03■□□□□ -0
GTF3A-209ENST00000640289 CRISPLD2Q9H0B8 497 aa15.03■□□□□ -0
GTF3A-209ENST00000640289 FOXP1Q9H334 677 aaPredicted RBP15.03■□□□□ -0
GTF3A-209ENST00000640289 XPNPEP3Q9NQH7 507 aa15.03■□□□□ -0
GTF3A-209ENST00000640289 PKD2L1Q9P0L9 805 aa15.03■□□□□ -0
GTF3A-209ENST00000640289 OGDHLQ9ULD0 1010 aa15.03■□□□□ -0
GTF3A-209ENST00000640289 VPS37CA5D8V6 355 aaPredicted RBP15.02■□□□□ -0
GTF3A-209ENST00000640289 MEIS1O00470 390 aa15.02■□□□□ -0
GTF3A-209ENST00000640289 WNT7AO00755 349 aa15.02■□□□□ -0
GTF3A-209ENST00000640289 ATP9AO75110 1047 aa15.02■□□□□ -0
GTF3A-209ENST00000640289 ADAMTS4O75173 837 aa15.02■□□□□ -0
GTF3A-209ENST00000640289 MYCNP04198 464 aaPredicted RBP15.02■□□□□ -0
GTF3A-209ENST00000640289 SYT1P21579 422 aa15.02■□□□□ -0
GTF3A-209ENST00000640289 UBA1P22314 1058 aaKnown RBP15.02■□□□□ -0
GTF3A-209ENST00000640289 CIITAP33076 1130 aa15.02■□□□□ -0
GTF3A-209ENST00000640289 USP11P51784 963 aa15.02■□□□□ -0
GTF3A-209ENST00000640289 BECN1Q14457 450 aa15.02■□□□□ -0
GTF3A-209ENST00000640289 LETM2Q2VYF4 491 aa15.02■□□□□ -0
GTF3A-209ENST00000640289 MCTP1Q6DN14 999 aa15.02■□□□□ -0
GTF3A-209ENST00000640289 NEK8Q86SG6 692 aa15.02■□□□□ -0
GTF3A-209ENST00000640289 PLA2G4DQ86XP0 818 aa15.02■□□□□ -0
GTF3A-209ENST00000640289 KCNH7Q9NS40 1196 aa15.02■□□□□ -0
GTF3A-209ENST00000640289 NKRFO15226 690 aaKnown RBP eCLIP15.01□□□□□ -0.01
GTF3A-209ENST00000640289 CTAGE5O15320 804 aa15.01□□□□□ -0.01
GTF3A-209ENST00000640289 GGPS1O95749 300 aa15.01□□□□□ -0.01
GTF3A-209ENST00000640289 C6orf222P0C671 652 aaPredicted RBP15.01□□□□□ -0.01
GTF3A-209ENST00000640289 U2AF2P26368 475 aaKnown RBP eCLIP15.01□□□□□ -0.01
GTF3A-209ENST00000640289 GJA9P57773 515 aa15.01□□□□□ -0.01
GTF3A-209ENST00000640289 BEX3Q00994 111 aa15.01□□□□□ -0.01
GTF3A-209ENST00000640289 ARHGAP1Q07960 439 aa15.01□□□□□ -0.01
GTF3A-209ENST00000640289 LRRC41Q15345 812 aa15.01□□□□□ -0.01
GTF3A-209ENST00000640289 PRR16Q569H4 304 aa15.01□□□□□ -0.01
GTF3A-209ENST00000640289 KCNV1Q6PIU1 500 aa15.01□□□□□ -0.01
GTF3A-209ENST00000640289 NOSTRINQ8IVI9 506 aa15.01□□□□□ -0.01
GTF3A-209ENST00000640289 OR6J1Q8NGC5 347 aa15.01□□□□□ -0.01
GTF3A-209ENST00000640289 LENG9Q96B70 501 aa15.01□□□□□ -0.01
GTF3A-209ENST00000640289 UPF3AQ9H1J1 476 aaKnown RBP15.01□□□□□ -0.01
GTF3A-209ENST00000640289 CCNT1O60563 726 aaKnown RBP15□□□□□ -0.01
GTF3A-209ENST00000640289 GH1P01241 217 aa15□□□□□ -0.01
GTF3A-209ENST00000640289 TGFB3P10600 412 aa15□□□□□ -0.01
GTF3A-209ENST00000640289 KCNA2P16389 499 aa15□□□□□ -0.01
GTF3A-209ENST00000640289 ATP2B1P20020 1258 aa15□□□□□ -0.01
GTF3A-209ENST00000640289 PDCP20941 246 aa15□□□□□ -0.01
GTF3A-209ENST00000640289 MNX1P50219 401 aaPredicted RBP15□□□□□ -0.01
GTF3A-209ENST00000640289 CYFIP1Q7L576 1253 aa15□□□□□ -0.01
GTF3A-209ENST00000640289 DIS3LQ8TF46 1054 aaKnown RBP15□□□□□ -0.01
GTF3A-209ENST00000640289 CDHR1Q96JP9 859 aa15□□□□□ -0.01
GTF3A-209ENST00000640289 AP5M1Q9H0R1 490 aa15□□□□□ -0.01
GTF3A-209ENST00000640289 Q9Y3F1 56 aa15□□□□□ -0.01
GTF3A-209ENST00000640289 TELO2Q9Y4R8 837 aa15□□□□□ -0.01
GTF3A-209ENST00000640289 CENPFP49454 3210 aa15□□□□□ -0.01
GTF3A-209ENST00000640289 CYP3A7-CYP3A51PA0A087WV96 503 aa14.99□□□□□ -0.01
GTF3A-209ENST00000640289 MAFGO15525 162 aa14.99□□□□□ -0.01
GTF3A-209ENST00000640289 SLC37A4O43826 429 aa14.99□□□□□ -0.01
GTF3A-209ENST00000640289 CYP3A7P24462 503 aa14.99□□□□□ -0.01
GTF3A-209ENST00000640289 ITGB3BPQ13352 177 aaPredicted RBP14.99□□□□□ -0.01
GTF3A-209ENST00000640289 Q4G0T1 1027 aa14.99□□□□□ -0.01
GTF3A-209ENST00000640289 CELF3Q5SZQ8 465 aaKnown RBP14.99□□□□□ -0.01
GTF3A-209ENST00000640289 MYSM1Q5VVJ2 828 aa14.99□□□□□ -0.01
GTF3A-209ENST00000640289 NIPA1Q7RTP0 329 aa14.99□□□□□ -0.01
GTF3A-209ENST00000640289 FERMT3Q86UX7 667 aa14.99□□□□□ -0.01
GTF3A-209ENST00000640289 DHX37Q8IY37 1157 aaKnown RBP14.99□□□□□ -0.01
GTF3A-209ENST00000640289 KLHDC9Q8NEP7 349 aa14.99□□□□□ -0.01
GTF3A-209ENST00000640289 GJA10Q969M2 543 aa14.99□□□□□ -0.01
GTF3A-209ENST00000640289 MBOAT7Q96N66 472 aa14.99□□□□□ -0.01
GTF3A-209ENST00000640289 SPC25Q9HBM1 224 aa14.99□□□□□ -0.01
GTF3A-209ENST00000640289 AGO4Q9HCK5 861 aaKnown RBP14.99□□□□□ -0.01
GTF3A-209ENST00000640289 MTMR6Q9Y217 621 aa14.99□□□□□ -0.01
GTF3A-209ENST00000640289 MSH4O15457 936 aa14.98□□□□□ -0.01
GTF3A-209ENST00000640289 STX6O43752 255 aa14.98□□□□□ -0.01
GTF3A-209ENST00000640289 FARP2O94887 1054 aaPredicted RBP14.98□□□□□ -0.01
GTF3A-209ENST00000640289 CST5P28325 142 aaPredicted RBP14.98□□□□□ -0.01
GTF3A-209ENST00000640289 NKX3-2P78367 333 aa14.98□□□□□ -0.01
GTF3A-209ENST00000640289 SETQ01105 290 aaPredicted RBP14.98□□□□□ -0.01
GTF3A-209ENST00000640289 SP4Q02446 784 aa14.98□□□□□ -0.01
GTF3A-209ENST00000640289 NEDD9Q14511 834 aa14.98□□□□□ -0.01
GTF3A-209ENST00000640289 NBR1Q14596 966 aa14.98□□□□□ -0.01
GTF3A-209ENST00000640289 FSCN1Q16658 493 aaKnown RBP14.98□□□□□ -0.01
GTF3A-209ENST00000640289 HSDL1Q3SXM5 330 aa14.98□□□□□ -0.01
GTF3A-209ENST00000640289 GNASQ5JWF2 1037 aa14.98□□□□□ -0.01
GTF3A-209ENST00000640289 CCSAPQ6IQ19 270 aaPredicted RBP14.98□□□□□ -0.01
GTF3A-209ENST00000640289 MOXD1Q6UVY6 613 aa14.98□□□□□ -0.01
GTF3A-209ENST00000640289 RNF180Q86T96 592 aa14.98□□□□□ -0.01
GTF3A-209ENST00000640289 ARRDC4Q8NCT1 418 aa14.98□□□□□ -0.01
GTF3A-209ENST00000640289 AFG1LQ8WV93 481 aa14.98□□□□□ -0.01
GTF3A-209ENST00000640289 SENP7Q9BQF6 1050 aa14.98□□□□□ -0.01
GTF3A-209ENST00000640289 ZNF577Q9BSK1 485 aa14.98□□□□□ -0.01
GTF3A-209ENST00000640289 MLXIPQ9HAP2 919 aa14.98□□□□□ -0.01
GTF3A-209ENST00000640289 TSHZ2Q9NRE2 1034 aa14.98□□□□□ -0.01
GTF3A-209ENST00000640289 DDX25Q9UHL0 483 aaKnown RBP14.98□□□□□ -0.01
GTF3A-209ENST00000640289 KBTBD13C9JR72 458 aa14.97□□□□□ -0.01
GTF3A-209ENST00000640289 DDX39AO00148 427 aaKnown RBP14.97□□□□□ -0.01
GTF3A-209ENST00000640289 IPO5O00410 1097 aaKnown RBP14.97□□□□□ -0.01
GTF3A-209ENST00000640289 DNM1LO00429 736 aa14.97□□□□□ -0.01
GTF3A-209ENST00000640289 DHX15O43143 795 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms