RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 MYSM1Q5VVJ2 828 aa14.13□□□□□ -0.15
CACNA1A-250ENST00000637809 VSIG10LQ86VR7 867 aa14.13□□□□□ -0.15
CACNA1A-250ENST00000637809 DHX37Q8IY37 1157 aaKnown RBP14.13□□□□□ -0.15
CACNA1A-250ENST00000637809 IL31RAQ8NI17 732 aa14.13□□□□□ -0.15
CACNA1A-250ENST00000637809 HLA-CQ95604 372 aa14.13□□□□□ -0.15
CACNA1A-250ENST00000637809 RAD9AQ99638 391 aa14.13□□□□□ -0.15
CACNA1A-250ENST00000637809 UBAC1Q9BSL1 405 aa14.13□□□□□ -0.15
CACNA1A-250ENST00000637809 ALG1Q9BT22 464 aa14.13□□□□□ -0.15
CACNA1A-250ENST00000637809 KRT23Q9C075 422 aa14.13□□□□□ -0.15
CACNA1A-250ENST00000637809 CTNNA3Q9UI47 895 aa14.13□□□□□ -0.15
CACNA1A-250ENST00000637809 MAD2L2Q9UI95 211 aa14.13□□□□□ -0.15
CACNA1A-250ENST00000637809 PALM3A6NDB9 673 aaPredicted RBP14.12□□□□□ -0.15
CACNA1A-250ENST00000637809 KLRF2D3W0D1 207 aa14.12□□□□□ -0.15
CACNA1A-250ENST00000637809 HIP1O00291 1037 aa14.12□□□□□ -0.15
CACNA1A-250ENST00000637809 ZBTB5O15062 677 aa14.12□□□□□ -0.15
CACNA1A-250ENST00000637809 PPFIA4O75335 1185 aa14.12□□□□□ -0.15
CACNA1A-250ENST00000637809 ERVK-21P61565 698 aa14.12□□□□□ -0.15
CACNA1A-250ENST00000637809 SP2Q02086 613 aa14.12□□□□□ -0.15
CACNA1A-250ENST00000637809 HSDL1Q3SXM5 330 aa14.12□□□□□ -0.15
CACNA1A-250ENST00000637809 CELF3Q5SZQ8 465 aaKnown RBP14.12□□□□□ -0.15
CACNA1A-250ENST00000637809 IFIT1BQ5T764 474 aaKnown RBP14.12□□□□□ -0.15
CACNA1A-250ENST00000637809 CYB5R4Q7L1T6 521 aa14.12□□□□□ -0.15
CACNA1A-250ENST00000637809 GDPD5Q8WTR4 605 aa14.12□□□□□ -0.15
CACNA1A-250ENST00000637809 ZBED2Q9BTP6 218 aa14.12□□□□□ -0.15
CACNA1A-250ENST00000637809 CNNM2Q9H8M5 875 aa14.12□□□□□ -0.15
CACNA1A-250ENST00000637809 SUGCTQ9HAC7 445 aa14.12□□□□□ -0.15
CACNA1A-250ENST00000637809 MAP3K20Q9NYL2 800 aaKnown RBP14.12□□□□□ -0.15
CACNA1A-250ENST00000637809 LMCD1Q9NZU5 365 aa14.12□□□□□ -0.15
CACNA1A-250ENST00000637809 LINC01553A4QN01 128 aa14.11□□□□□ -0.15
CACNA1A-250ENST00000637809 SORBS3O60504 671 aa14.11□□□□□ -0.15
CACNA1A-250ENST00000637809 EFCAB14O75071 495 aa14.11□□□□□ -0.15
CACNA1A-250ENST00000637809 MYCLP12524 364 aaPredicted RBP14.11□□□□□ -0.15
CACNA1A-250ENST00000637809 UBA1P22314 1058 aaKnown RBP14.11□□□□□ -0.15
CACNA1A-250ENST00000637809 HOXA13P31271 388 aaPredicted RBP14.11□□□□□ -0.15
CACNA1A-250ENST00000637809 HOXC8P31273 242 aa14.11□□□□□ -0.15
CACNA1A-250ENST00000637809 IKBKEQ14164 716 aa14.11□□□□□ -0.15
CACNA1A-250ENST00000637809 PGM5Q15124 567 aa14.11□□□□□ -0.15
CACNA1A-250ENST00000637809 SERINC5Q86VE9 423 aa14.11□□□□□ -0.15
CACNA1A-250ENST00000637809 GPKOWQ92917 476 aaPredicted RBP eCLIP14.11□□□□□ -0.15
CACNA1A-250ENST00000637809 C16orf70Q9BSU1 422 aa14.11□□□□□ -0.15
CACNA1A-250ENST00000637809 C1QTNF1Q9BXJ1 281 aa14.11□□□□□ -0.15
CACNA1A-250ENST00000637809 PCDHA1Q9Y5I3 950 aa14.11□□□□□ -0.15
CACNA1A-250ENST00000637809 LAMA4Q16363 1823 aa14.11□□□□□ -0.15
CACNA1A-250ENST00000637809 LGR5O75473 907 aa14.1□□□□□ -0.15
CACNA1A-250ENST00000637809 GGPS1O95749 300 aa14.1□□□□□ -0.15
CACNA1A-250ENST00000637809 KCNV1Q6PIU1 500 aa14.1□□□□□ -0.15
CACNA1A-250ENST00000637809 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.1□□□□□ -0.15
CACNA1A-250ENST00000637809 SAMD3Q8N6K7 520 aa14.1□□□□□ -0.15
CACNA1A-250ENST00000637809 SPATA33Q96N06 139 aa14.1□□□□□ -0.15
CACNA1A-250ENST00000637809 TGS1Q96RS0 853 aaKnown RBP14.1□□□□□ -0.15
CACNA1A-250ENST00000637809 EPHX3Q9H6B9 360 aa14.1□□□□□ -0.15
CACNA1A-250ENST00000637809 BCAS3Q9H6U6 928 aa14.1□□□□□ -0.15
CACNA1A-250ENST00000637809 CYTH3O43739 400 aa14.09□□□□□ -0.15
CACNA1A-250ENST00000637809 TGFB3P10600 412 aa14.09□□□□□ -0.15
CACNA1A-250ENST00000637809 KHSRPQ92945 711 aaKnown RBP eCLIP14.09□□□□□ -0.15
CACNA1A-250ENST00000637809 ZFP91Q96JP5 570 aaPredicted RBP14.09□□□□□ -0.15
CACNA1A-250ENST00000637809 RIOX1Q9H6W3 641 aa14.09□□□□□ -0.15
CACNA1A-250ENST00000637809 SENP2Q9HC62 589 aa14.09□□□□□ -0.15
CACNA1A-250ENST00000637809 MTUS1Q9ULD2 1270 aa14.09□□□□□ -0.15
CACNA1A-250ENST00000637809 PTPRSQ13332 1948 aa14.08□□□□□ -0.16
CACNA1A-250ENST00000637809 GCOM1H8Y6P7 765 aaPredicted RBP14.08□□□□□ -0.16
CACNA1A-250ENST00000637809 POLR2MP0CAP2 368 aa14.08□□□□□ -0.16
CACNA1A-250ENST00000637809 PLA2G5P39877 138 aa14.08□□□□□ -0.16
CACNA1A-250ENST00000637809 THPOP40225 353 aa14.08□□□□□ -0.16
CACNA1A-250ENST00000637809 HTRA4P83105 476 aaPredicted RBP14.08□□□□□ -0.16
CACNA1A-250ENST00000637809 GRM4Q14833 912 aa14.08□□□□□ -0.16
CACNA1A-250ENST00000637809 PLEKHG4Q58EX7 1191 aa14.08□□□□□ -0.16
CACNA1A-250ENST00000637809 FAM117BQ6P1L5 589 aa14.08□□□□□ -0.16
CACNA1A-250ENST00000637809 HOMER1Q86YM7 354 aa14.08□□□□□ -0.16
CACNA1A-250ENST00000637809 DBF4BQ8NFT6 615 aa14.08□□□□□ -0.16
CACNA1A-250ENST00000637809 SP7Q8TDD2 431 aaPredicted RBP14.08□□□□□ -0.16
CACNA1A-250ENST00000637809 PIGSQ96S52 555 aa14.08□□□□□ -0.16
CACNA1A-250ENST00000637809 OSBPL7Q9BZF2 842 aa14.08□□□□□ -0.16
CACNA1A-250ENST00000637809 FRMPD4Q14CM0 1322 aa14.08□□□□□ -0.16
CACNA1A-250ENST00000637809 EMSYQ7Z589 1322 aa14.08□□□□□ -0.16
CACNA1A-250ENST00000637809 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.07□□□□□ -0.16
CACNA1A-250ENST00000637809 RSPH10B2B2RC85 870 aa14.07□□□□□ -0.16
CACNA1A-250ENST00000637809 H3BRB1 525 aa14.07□□□□□ -0.16
CACNA1A-250ENST00000637809 RSPH10BP0C881 870 aa14.07□□□□□ -0.16
CACNA1A-250ENST00000637809 SMIM10L2AP0DMW4 78 aa14.07□□□□□ -0.16
CACNA1A-250ENST00000637809 SMIM10L2BP0DMW5 78 aa14.07□□□□□ -0.16
CACNA1A-250ENST00000637809 GSPT1P15170 499 aaKnown RBP14.07□□□□□ -0.16
CACNA1A-250ENST00000637809 CCND2P30279 289 aa14.07□□□□□ -0.16
CACNA1A-250ENST00000637809 MRPS9P82933 396 aaKnown RBP14.07□□□□□ -0.16
CACNA1A-250ENST00000637809 TROAPQ12815 778 aa14.07□□□□□ -0.16
CACNA1A-250ENST00000637809 SEMA3FQ13275 785 aa14.07□□□□□ -0.16
CACNA1A-250ENST00000637809 FCHSD1Q86WN1 690 aa14.07□□□□□ -0.16
CACNA1A-250ENST00000637809 EXOC6Q8TAG9 804 aa14.07□□□□□ -0.16
CACNA1A-250ENST00000637809 INPP4AQ96PE3 977 aaPredicted RBP14.07□□□□□ -0.16
CACNA1A-250ENST00000637809 C17orf80Q9BSJ5 609 aa14.07□□□□□ -0.16
CACNA1A-250ENST00000637809 LRFN3Q9BTN0 628 aa14.07□□□□□ -0.16
CACNA1A-250ENST00000637809 TUT1Q9H6E5 874 aaKnown RBP14.07□□□□□ -0.16
CACNA1A-250ENST00000637809 CD320Q9NPF0 282 aa14.07□□□□□ -0.16
CACNA1A-250ENST00000637809 INSL6Q9Y581 213 aa14.07□□□□□ -0.16
CACNA1A-250ENST00000637809 TAF6LQ9Y6J9 622 aa14.07□□□□□ -0.16
CACNA1A-250ENST00000637809 COL4A4P53420 1690 aaPredicted RBP14.07□□□□□ -0.16
CACNA1A-250ENST00000637809 TCF20Q9UGU0 1960 aaKnown RBP14.06□□□□□ -0.16
CACNA1A-250ENST00000637809 PNMA6FA0A0J9YX94 578 aa14.06□□□□□ -0.16
CACNA1A-250ENST00000637809 C17orf102A2RUQ5 167 aa14.06□□□□□ -0.16
CACNA1A-250ENST00000637809 TREHO43280 583 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms