RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 EARS2Q5JPH6 523 aaKnown RBP19.6■□□□□ 0.73
CLN6-218ENST00000637223 CCDC62Q6P9F0 684 aa19.6■□□□□ 0.73
CLN6-218ENST00000637223 PIK3AP1Q6ZUJ8 805 aa19.6■□□□□ 0.73
CLN6-218ENST00000637223 NLRX1Q86UT6 975 aa19.6■□□□□ 0.73
CLN6-218ENST00000637223 CRYGNQ8WXF5 182 aa19.6■□□□□ 0.73
CLN6-218ENST00000637223 INTS4Q96HW7 963 aaKnown RBP19.6■□□□□ 0.73
CLN6-218ENST00000637223 GNEQ9Y223 722 aaKnown RBP19.6■□□□□ 0.73
CLN6-218ENST00000637223 RBM19Q9Y4C8 960 aaKnown RBP19.6■□□□□ 0.73
CLN6-218ENST00000637223 UBIAD1Q9Y5Z9 338 aa19.6■□□□□ 0.73
CLN6-218ENST00000637223 FAM205CA6NFA0 338 aa19.59■□□□□ 0.73
CLN6-218ENST00000637223 DYNC1LI2O43237 492 aaPredicted RBP19.59■□□□□ 0.73
CLN6-218ENST00000637223 FARP2O94887 1054 aaPredicted RBP19.59■□□□□ 0.73
CLN6-218ENST00000637223 IRX5P78411 483 aaPredicted RBP19.59■□□□□ 0.73
CLN6-218ENST00000637223 SEMA3FQ13275 785 aa19.59■□□□□ 0.73
CLN6-218ENST00000637223 INF2Q27J81 1249 aa19.59■□□□□ 0.73
CLN6-218ENST00000637223 TLK2Q86UE8 772 aa19.59■□□□□ 0.73
CLN6-218ENST00000637223 CYP2W1Q8TAV3 490 aa19.59■□□□□ 0.73
CLN6-218ENST00000637223 TNFRSF25Q93038 417 aa19.59■□□□□ 0.73
CLN6-218ENST00000637223 MXRA8Q9BRK3 442 aa19.59■□□□□ 0.73
CLN6-218ENST00000637223 JADE2Q9NQC1 790 aa19.59■□□□□ 0.73
CLN6-218ENST00000637223 DDX41Q9UJV9 622 aaKnown RBP19.59■□□□□ 0.73
CLN6-218ENST00000637223 MYADML2A6NDP7 307 aa19.58■□□□□ 0.72
CLN6-218ENST00000637223 SPATA31C2B4DYI2 1134 aa19.58■□□□□ 0.72
CLN6-218ENST00000637223 FIBPO43427 364 aa19.58■□□□□ 0.72
CLN6-218ENST00000637223 EDIL3O43854 480 aa19.58■□□□□ 0.72
CLN6-218ENST00000637223 EVI5O60447 810 aa19.58■□□□□ 0.72
CLN6-218ENST00000637223 SORBS3O60504 671 aa19.58■□□□□ 0.72
CLN6-218ENST00000637223 CYP3A4P08684 503 aa19.58■□□□□ 0.72
CLN6-218ENST00000637223 ICAM3P32942 547 aa19.58■□□□□ 0.72
CLN6-218ENST00000637223 CEP55Q53EZ4 464 aa19.58■□□□□ 0.72
CLN6-218ENST00000637223 SPRYD3Q8NCJ5 442 aa19.58■□□□□ 0.72
CLN6-218ENST00000637223 OR6J1Q8NGC5 347 aa19.58■□□□□ 0.72
CLN6-218ENST00000637223 GPRASP2Q96D09 838 aa19.58■□□□□ 0.72
CLN6-218ENST00000637223 AP5M1Q9H0R1 490 aa19.58■□□□□ 0.72
CLN6-218ENST00000637223 PKD2L1Q9P0L9 805 aa19.58■□□□□ 0.72
CLN6-218ENST00000637223 CUL9Q8IWT3 2517 aa19.57■□□□□ 0.72
CLN6-218ENST00000637223 FAM86B1E9PN63 330 aa19.57■□□□□ 0.72
CLN6-218ENST00000637223 H3BQV1 296 aa19.57■□□□□ 0.72
CLN6-218ENST00000637223 NKRFO15226 690 aaKnown RBP eCLIP19.57■□□□□ 0.72
CLN6-218ENST00000637223 ADAMTS4O75173 837 aa19.57■□□□□ 0.72
CLN6-218ENST00000637223 HSP90AA1P07900 732 aaKnown RBP19.57■□□□□ 0.72
CLN6-218ENST00000637223 FAM86B2P0C5J1 330 aa19.57■□□□□ 0.72
CLN6-218ENST00000637223 C6orf222P0C671 652 aaPredicted RBP19.57■□□□□ 0.72
CLN6-218ENST00000637223 UBA1P22314 1058 aaKnown RBP19.57■□□□□ 0.72
CLN6-218ENST00000637223 GJA9P57773 515 aa19.57■□□□□ 0.72
CLN6-218ENST00000637223 SP2Q02086 613 aa19.57■□□□□ 0.72
CLN6-218ENST00000637223 MTMR1Q13613 665 aa19.57■□□□□ 0.72
CLN6-218ENST00000637223 GNL2Q13823 731 aaKnown RBP19.57■□□□□ 0.72
CLN6-218ENST00000637223 LRRC41Q15345 812 aa19.57■□□□□ 0.72
CLN6-218ENST00000637223 LARP1BQ659C4 914 aaKnown RBP19.57■□□□□ 0.72
CLN6-218ENST00000637223 KCNV1Q6PIU1 500 aa19.57■□□□□ 0.72
CLN6-218ENST00000637223 UPF3AQ9H1J1 476 aaKnown RBP19.57■□□□□ 0.72
CLN6-218ENST00000637223 SPC25Q9HBM1 224 aa19.57■□□□□ 0.72
CLN6-218ENST00000637223 COL6A3P12111 3177 aa19.56■□□□□ 0.72
CLN6-218ENST00000637223 KIF28PB7ZC32 967 aa19.56■□□□□ 0.72
CLN6-218ENST00000637223 GH1P01241 217 aa19.56■□□□□ 0.72
CLN6-218ENST00000637223 ARP10275 920 aa19.56■□□□□ 0.72
CLN6-218ENST00000637223 BEX3Q00994 111 aa19.56■□□□□ 0.72
CLN6-218ENST00000637223 ARHGAP1Q07960 439 aa19.56■□□□□ 0.72
CLN6-218ENST00000637223 RNF180Q86T96 592 aa19.56■□□□□ 0.72
CLN6-218ENST00000637223 PLA2G4DQ86XP0 818 aa19.56■□□□□ 0.72
CLN6-218ENST00000637223 ARRDC4Q8NCT1 418 aa19.56■□□□□ 0.72
CLN6-218ENST00000637223 CDHR1Q96JP9 859 aa19.56■□□□□ 0.72
CLN6-218ENST00000637223 BCAS3Q9H6U6 928 aa19.56■□□□□ 0.72
CLN6-218ENST00000637223 Q9Y3F1 56 aa19.56■□□□□ 0.72
CLN6-218ENST00000637223 IGLV3-22A0A075B6J6 115 aa19.55■□□□□ 0.72
CLN6-218ENST00000637223 A0A0C4DFX4 3053 aa19.55■□□□□ 0.72
CLN6-218ENST00000637223 MEIS1O00470 390 aa19.55■□□□□ 0.72
CLN6-218ENST00000637223 TDP2O95551 362 aa19.55■□□□□ 0.72
CLN6-218ENST00000637223 GGPS1O95749 300 aa19.55■□□□□ 0.72
CLN6-218ENST00000637223 TGFB3P10600 412 aa19.55■□□□□ 0.72
CLN6-218ENST00000637223 CIITAP33076 1130 aa19.55■□□□□ 0.72
CLN6-218ENST00000637223 USP11P51784 963 aa19.55■□□□□ 0.72
CLN6-218ENST00000637223 LETM2Q2VYF4 491 aa19.55■□□□□ 0.72
CLN6-218ENST00000637223 PRR16Q569H4 304 aa19.55■□□□□ 0.72
CLN6-218ENST00000637223 MCTP1Q6DN14 999 aa19.55■□□□□ 0.72
CLN6-218ENST00000637223 NEK8Q86SG6 692 aa19.55■□□□□ 0.72
CLN6-218ENST00000637223 DHX37Q8IY37 1157 aaKnown RBP19.55■□□□□ 0.72
CLN6-218ENST00000637223 DIS3LQ8TF46 1054 aaKnown RBP19.55■□□□□ 0.72
CLN6-218ENST00000637223 UIMC1Q96RL1 719 aa19.55■□□□□ 0.72
CLN6-218ENST00000637223 FOXP1Q9H334 677 aaPredicted RBP19.55■□□□□ 0.72
CLN6-218ENST00000637223 KCNH7Q9NS40 1196 aa19.55■□□□□ 0.72
CLN6-218ENST00000637223 KBTBD13C9JR72 458 aa19.54■□□□□ 0.72
CLN6-218ENST00000637223 DNM1LO00429 736 aa19.54■□□□□ 0.72
CLN6-218ENST00000637223 CTAGE5O15320 804 aa19.54■□□□□ 0.72
CLN6-218ENST00000637223 ATP9AO75110 1047 aa19.54■□□□□ 0.72
CLN6-218ENST00000637223 FSCN1Q16658 493 aaKnown RBP19.54■□□□□ 0.72
CLN6-218ENST00000637223 GNASQ5JWF2 1037 aa19.54■□□□□ 0.72
CLN6-218ENST00000637223 CELF3Q5SZQ8 465 aaKnown RBP19.54■□□□□ 0.72
CLN6-218ENST00000637223 NIPA1Q7RTP0 329 aa19.54■□□□□ 0.72
CLN6-218ENST00000637223 ANKLE1Q8NAG6 615 aa19.54■□□□□ 0.72
CLN6-218ENST00000637223 KLHDC9Q8NEP7 349 aa19.54■□□□□ 0.72
CLN6-218ENST00000637223 VPS37CA5D8V6 355 aaPredicted RBP19.53■□□□□ 0.72
CLN6-218ENST00000637223 MAFGO15525 162 aa19.53■□□□□ 0.72
CLN6-218ENST00000637223 KCNA2P16389 499 aa19.53■□□□□ 0.72
CLN6-218ENST00000637223 CAPN2P17655 700 aa19.53■□□□□ 0.72
CLN6-218ENST00000637223 LAMC2Q13753 1193 aa19.53■□□□□ 0.72
CLN6-218ENST00000637223 BECN1Q14457 450 aa19.53■□□□□ 0.72
CLN6-218ENST00000637223 NEDD9Q14511 834 aa19.53■□□□□ 0.72
CLN6-218ENST00000637223 CYFIP1Q7L576 1253 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms