RNA–Protein interactions for RNA: ENST00000636898.1

CHRNA7-221, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,057 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-221ENST00000636898 CREG2Q8IUH2 290 aa17.79■□□□□ 0.44
CHRNA7-221ENST00000636898 SYN2Q92777 582 aaPredicted RBP17.79■□□□□ 0.44
CHRNA7-221ENST00000636898 CEP63Q96MT8 703 aa17.79■□□□□ 0.44
CHRNA7-221ENST00000636898 ATF5Q9Y2D1 282 aaPredicted RBP17.79■□□□□ 0.44
CHRNA7-221ENST00000636898 COL4A3BPQ9Y5P4 624 aa17.79■□□□□ 0.44
CHRNA7-221ENST00000636898 MYH4Q9Y623 1939 aa17.79■□□□□ 0.44
CHRNA7-221ENST00000636898 GNA14O95837 355 aa17.79■□□□□ 0.44
CHRNA7-221ENST00000636898 ECM1Q16610 540 aa17.79■□□□□ 0.44
CHRNA7-221ENST00000636898 ASTE1Q2TB18 679 aaPredicted RBP17.79■□□□□ 0.44
CHRNA7-221ENST00000636898 FAM26FQ5R3K3 315 aa17.79■□□□□ 0.44
CHRNA7-221ENST00000636898 PDXDC1Q6P996 788 aa17.79■□□□□ 0.44
CHRNA7-221ENST00000636898 MMGT1Q8N4V1 131 aa17.79■□□□□ 0.44
CHRNA7-221ENST00000636898 GOLGA5Q8TBA6 731 aa17.79■□□□□ 0.44
CHRNA7-221ENST00000636898 COG1Q8WTW3 980 aa17.79■□□□□ 0.44
CHRNA7-221ENST00000636898 CCDC102AQ96A19 550 aa17.79■□□□□ 0.44
CHRNA7-221ENST00000636898 PSTPIP2Q9H939 334 aa17.79■□□□□ 0.44
CHRNA7-221ENST00000636898 FAN1Q9Y2M0 1017 aa17.79■□□□□ 0.44
CHRNA7-221ENST00000636898 CAPN6Q9Y6Q1 641 aa17.79■□□□□ 0.44
CHRNA7-221ENST00000636898 ZNF185O15231 689 aa17.78■□□□□ 0.44
CHRNA7-221ENST00000636898 TCP1P17987 556 aaKnown RBP17.78■□□□□ 0.44
CHRNA7-221ENST00000636898 LMAN1P49257 510 aa17.78■□□□□ 0.44
CHRNA7-221ENST00000636898 MARSP56192 900 aaKnown RBP17.78■□□□□ 0.44
CHRNA7-221ENST00000636898 CLEC10AQ8IUN9 316 aa17.78■□□□□ 0.44
CHRNA7-221ENST00000636898 PANK4Q9NVE7 773 aa17.78■□□□□ 0.44
CHRNA7-221ENST00000636898 ARFGEF1Q9Y6D6 1849 aa17.78■□□□□ 0.44
CHRNA7-221ENST00000636898 RBAK-RBAKDNI3L0D1 243 aa17.78■□□□□ 0.44
CHRNA7-221ENST00000636898 PPEF1O14829 653 aaPredicted RBP17.78■□□□□ 0.44
CHRNA7-221ENST00000636898 MARCH6O60337 910 aa17.78■□□□□ 0.44
CHRNA7-221ENST00000636898 ZSCAN26Q16670 478 aa17.78■□□□□ 0.44
CHRNA7-221ENST00000636898 CACNA2D4Q7Z3S7 1137 aa17.78■□□□□ 0.44
CHRNA7-221ENST00000636898 RNF10Q8N5U6 811 aaKnown RBP17.78■□□□□ 0.44
CHRNA7-221ENST00000636898 CCDC155Q8N6L0 562 aa17.78■□□□□ 0.44
CHRNA7-221ENST00000636898 CCDC17Q96LX7 622 aa17.78■□□□□ 0.44
CHRNA7-221ENST00000636898 EHD4Q9H223 541 aa17.78■□□□□ 0.44
CHRNA7-221ENST00000636898 USP40Q9NVE5 1235 aa17.78■□□□□ 0.44
CHRNA7-221ENST00000636898 CEP72Q9P209 647 aa17.78■□□□□ 0.44
CHRNA7-221ENST00000636898 ATP6V0A2Q9Y487 856 aa17.78■□□□□ 0.44
CHRNA7-221ENST00000636898 HLA-DOAP06340 250 aa17.77■□□□□ 0.44
CHRNA7-221ENST00000636898 ACTN2P35609 894 aa17.77■□□□□ 0.44
CHRNA7-221ENST00000636898 MAGEA1P43355 309 aa17.77■□□□□ 0.44
CHRNA7-221ENST00000636898 USP11P51784 963 aa17.77■□□□□ 0.44
CHRNA7-221ENST00000636898 KCNMA1Q12791 1236 aa17.77■□□□□ 0.44
CHRNA7-221ENST00000636898 LRRC41Q15345 812 aa17.77■□□□□ 0.44
CHRNA7-221ENST00000636898 TTBK2Q6IQ55 1244 aa17.77■□□□□ 0.44
CHRNA7-221ENST00000636898 CCNI2Q6ZMN8 369 aaPredicted RBP17.77■□□□□ 0.44
CHRNA7-221ENST00000636898 CCDC65Q8IXS2 484 aa17.77■□□□□ 0.44
CHRNA7-221ENST00000636898 CERS5Q8N5B7 392 aa17.77■□□□□ 0.44
CHRNA7-221ENST00000636898 GLIS3Q8NEA6 775 aa17.77■□□□□ 0.44
CHRNA7-221ENST00000636898 RNF216Q9NWF9 866 aaPredicted RBP17.77■□□□□ 0.44
CHRNA7-221ENST00000636898 HPCAL4Q9UM19 191 aa17.77■□□□□ 0.44
CHRNA7-221ENST00000636898 ATAD5Q96QE3 1844 aa17.77■□□□□ 0.43
CHRNA7-221ENST00000636898 CYP3A7-CYP3A51PA0A087WV96 503 aa17.76■□□□□ 0.43
CHRNA7-221ENST00000636898 USP17L10C9JJH3 530 aa17.76■□□□□ 0.43
CHRNA7-221ENST00000636898 POLRMTO00411 1230 aaKnown RBP17.76■□□□□ 0.43
CHRNA7-221ENST00000636898 CYP3A7P24462 503 aa17.76■□□□□ 0.43
CHRNA7-221ENST00000636898 DDR1Q08345 913 aa17.76■□□□□ 0.43
CHRNA7-221ENST00000636898 HGSNATQ68CP4 663 aa17.76■□□□□ 0.43
CHRNA7-221ENST00000636898 HHIPL2Q6UWX4 724 aa17.76■□□□□ 0.43
CHRNA7-221ENST00000636898 KCNMB3Q9NPA1 279 aa17.76■□□□□ 0.43
CHRNA7-221ENST00000636898 HYOU1Q9Y4L1 999 aa17.76■□□□□ 0.43
CHRNA7-221ENST00000636898 PCDHA2Q9Y5H9 948 aa17.76■□□□□ 0.43
CHRNA7-221ENST00000636898 TRAF5O00463 557 aa17.76■□□□□ 0.43
CHRNA7-221ENST00000636898 MOXD1Q6UVY6 613 aa17.76■□□□□ 0.43
CHRNA7-221ENST00000636898 SMCR8Q8TEV9 937 aaPredicted RBP17.76■□□□□ 0.43
CHRNA7-221ENST00000636898 GJD4Q96KN9 370 aaPredicted RBP17.76■□□□□ 0.43
CHRNA7-221ENST00000636898 MBOAT7Q96N66 472 aa17.76■□□□□ 0.43
CHRNA7-221ENST00000636898 OSBPL9Q96SU4 736 aa17.76■□□□□ 0.43
CHRNA7-221ENST00000636898 TANGO6Q9C0B7 1094 aa17.76■□□□□ 0.43
CHRNA7-221ENST00000636898 MLXIPQ9HAP2 919 aa17.76■□□□□ 0.43
CHRNA7-221ENST00000636898 CWC15Q9P013 229 aaKnown RBP17.76■□□□□ 0.43
CHRNA7-221ENST00000636898 TSKSQ9UJT2 592 aa17.76■□□□□ 0.43
CHRNA7-221ENST00000636898 SPATA31A6Q5VVP1 1343 aa17.76■□□□□ 0.43
CHRNA7-221ENST00000636898 MYH10P35580 1976 aa17.76■□□□□ 0.43
CHRNA7-221ENST00000636898 RPS6KA5O75582 802 aa17.75■□□□□ 0.43
CHRNA7-221ENST00000636898 MOCS3O95396 460 aa17.75■□□□□ 0.43
CHRNA7-221ENST00000636898 TNNT3P45378 269 aaPredicted RBP17.75■□□□□ 0.43
CHRNA7-221ENST00000636898 SLC9C1Q4G0N8 1177 aa17.75■□□□□ 0.43
CHRNA7-221ENST00000636898 CCDC40Q4G0X9 1142 aa17.75■□□□□ 0.43
CHRNA7-221ENST00000636898 SLC27A3Q5K4L6 730 aa17.75■□□□□ 0.43
CHRNA7-221ENST00000636898 PPP4R3CPQ6ZMV5 832 aa17.75■□□□□ 0.43
CHRNA7-221ENST00000636898 ZC3H3Q8IXZ2 948 aaKnown RBP17.75■□□□□ 0.43
CHRNA7-221ENST00000636898 ZC3H12CQ9C0D7 883 aaKnown RBP17.75■□□□□ 0.43
CHRNA7-221ENST00000636898 LUC7LQ9NQ29 371 aaKnown RBP17.75■□□□□ 0.43
CHRNA7-221ENST00000636898 FAM184BQ9ULE4 1060 aa17.75■□□□□ 0.43
CHRNA7-221ENST00000636898 ZC3H4Q9UPT8 1303 aaKnown RBP17.75■□□□□ 0.43
CHRNA7-221ENST00000636898 FRMD3A2A2Y4 597 aa17.75■□□□□ 0.43
CHRNA7-221ENST00000636898 F8W031 263 aaPredicted RBP17.75■□□□□ 0.43
CHRNA7-221ENST00000636898 ONECUT3O60422 494 aaPredicted RBP17.75■□□□□ 0.43
CHRNA7-221ENST00000636898 SYF2O95926 243 aaKnown RBP17.75■□□□□ 0.43
CHRNA7-221ENST00000636898 SERPING1P05155 500 aa17.75■□□□□ 0.43
CHRNA7-221ENST00000636898 PLA2G4BP0C869 781 aa17.75■□□□□ 0.43
CHRNA7-221ENST00000636898 SLC16A2P36021 539 aa17.75■□□□□ 0.43
CHRNA7-221ENST00000636898 C2orf54Q08AI8 447 aa17.75■□□□□ 0.43
CHRNA7-221ENST00000636898 KCTD1Q719H9 257 aa17.75■□□□□ 0.43
CHRNA7-221ENST00000636898 TRIM59Q8IWR1 403 aa17.75■□□□□ 0.43
CHRNA7-221ENST00000636898 SPATA4Q8NEY3 305 aa17.75■□□□□ 0.43
CHRNA7-221ENST00000636898 NOX5Q96PH1 765 aa17.75■□□□□ 0.43
CHRNA7-221ENST00000636898 PITPNM2Q9BZ72 1349 aa17.74■□□□□ 0.43
CHRNA7-221ENST00000636898 RIMBP2O15034 1052 aa17.74■□□□□ 0.43
CHRNA7-221ENST00000636898 NOL4O94818 638 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms