RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 PIK3CDO00329 1044 aa17.28■□□□□ 0.36
CACNA1A-230ENST00000636768 F2P00734 622 aa17.28■□□□□ 0.36
CACNA1A-230ENST00000636768 NEFLP07196 543 aa17.28■□□□□ 0.36
CACNA1A-230ENST00000636768 MRPS9P82933 396 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-230ENST00000636768 SP2Q02086 613 aa17.28■□□□□ 0.36
CACNA1A-230ENST00000636768 KIAA0753Q2KHM9 967 aa17.28■□□□□ 0.36
CACNA1A-230ENST00000636768 ADCK5Q3MIX3 580 aa17.28■□□□□ 0.36
CACNA1A-230ENST00000636768 HSDL1Q3SXM5 330 aa17.28■□□□□ 0.36
CACNA1A-230ENST00000636768 TSGA10IPQ3SY00 556 aa17.28■□□□□ 0.36
CACNA1A-230ENST00000636768 GDF6Q6KF10 455 aaPredicted RBP17.28■□□□□ 0.36
CACNA1A-230ENST00000636768 APOA5Q6Q788 366 aa17.28■□□□□ 0.36
CACNA1A-230ENST00000636768 SESTD1Q86VW0 696 aa17.28■□□□□ 0.36
CACNA1A-230ENST00000636768 RASEFQ8IZ41 740 aa17.28■□□□□ 0.36
CACNA1A-230ENST00000636768 MYLIPQ8WY64 445 aa17.28■□□□□ 0.36
CACNA1A-230ENST00000636768 INPP4AQ96PE3 977 aaPredicted RBP17.28■□□□□ 0.36
CACNA1A-230ENST00000636768 PBX4Q9BYU1 374 aa17.28■□□□□ 0.36
CACNA1A-230ENST00000636768 PSTPIP2Q9H939 334 aa17.28■□□□□ 0.36
CACNA1A-230ENST00000636768 RTEL1Q9NZ71 1219 aa17.28■□□□□ 0.36
CACNA1A-230ENST00000636768 SCN10AQ9Y5Y9 1956 aa17.28■□□□□ 0.36
CACNA1A-230ENST00000636768 NOP56O00567 594 aaKnown RBP17.27■□□□□ 0.36
CACNA1A-230ENST00000636768 MEIS2O14770 477 aa17.27■□□□□ 0.36
CACNA1A-230ENST00000636768 FIBPO43427 364 aa17.27■□□□□ 0.36
CACNA1A-230ENST00000636768 PPFIA4O75335 1185 aa17.27■□□□□ 0.36
CACNA1A-230ENST00000636768 HMGB1P09429 215 aaKnown RBP17.27■□□□□ 0.36
CACNA1A-230ENST00000636768 FOSL2P15408 326 aa17.27■□□□□ 0.36
CACNA1A-230ENST00000636768 RFC2P35250 354 aa17.27■□□□□ 0.36
CACNA1A-230ENST00000636768 PBX2P40425 430 aa17.27■□□□□ 0.36
CACNA1A-230ENST00000636768 FGD1P98174 961 aa17.27■□□□□ 0.36
CACNA1A-230ENST00000636768 EXOSC10Q01780 885 aaKnown RBP17.27■□□□□ 0.36
CACNA1A-230ENST00000636768 RAB30Q15771 203 aa17.27■□□□□ 0.36
CACNA1A-230ENST00000636768 PCNX4Q63HM2 1172 aa17.27■□□□□ 0.36
CACNA1A-230ENST00000636768 HEATR3Q7Z4Q2 680 aa17.27■□□□□ 0.36
CACNA1A-230ENST00000636768 CAGE1Q8TC20 777 aa17.27■□□□□ 0.36
CACNA1A-230ENST00000636768 ZNF576Q9H609 170 aa17.27■□□□□ 0.36
CACNA1A-230ENST00000636768 RBM28Q9NW13 759 aaKnown RBP17.27■□□□□ 0.36
CACNA1A-230ENST00000636768 HDAC6Q9UBN7 1215 aa17.27■□□□□ 0.36
CACNA1A-230ENST00000636768 GTF2IRD1Q9UHL9 959 aa17.27■□□□□ 0.36
CACNA1A-230ENST00000636768 MSRAQ9UJ68 235 aa17.27■□□□□ 0.36
CACNA1A-230ENST00000636768 SLC4A7Q9Y6M7 1214 aa17.27■□□□□ 0.36
CACNA1A-230ENST00000636768 ZBTB43O43298 467 aa17.26■□□□□ 0.35
CACNA1A-230ENST00000636768 ACTN1P12814 892 aa17.26■□□□□ 0.35
CACNA1A-230ENST00000636768 HOXD8P13378 290 aaPredicted RBP17.26■□□□□ 0.35
CACNA1A-230ENST00000636768 ICAM3P32942 547 aa17.26■□□□□ 0.35
CACNA1A-230ENST00000636768 NEDD9Q14511 834 aa17.26■□□□□ 0.35
CACNA1A-230ENST00000636768 RTN1Q16799 776 aa17.26■□□□□ 0.35
CACNA1A-230ENST00000636768 XRRA1Q6P2D8 792 aa17.26■□□□□ 0.35
CACNA1A-230ENST00000636768 FTOQ9C0B1 505 aaKnown RBP eCLIP17.26■□□□□ 0.35
CACNA1A-230ENST00000636768 NAP1L2Q9ULW6 460 aaPredicted RBP17.26■□□□□ 0.35
CACNA1A-230ENST00000636768 COL6A3P12111 3177 aa17.26■□□□□ 0.35
CACNA1A-230ENST00000636768 BAZ2BQ9UIF8 2168 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-230ENST00000636768 KLF18A0A0U1RQI7 1052 aa17.25■□□□□ 0.35
CACNA1A-230ENST00000636768 SPDYE3A6NKU9 549 aa17.25■□□□□ 0.35
CACNA1A-230ENST00000636768 GOLGA8AA7E2F4 631 aa17.25■□□□□ 0.35
CACNA1A-230ENST00000636768 GOLGA8BA8MQT2 603 aa17.25■□□□□ 0.35
CACNA1A-230ENST00000636768 SPATA31C2B4DYI2 1134 aa17.25■□□□□ 0.35
CACNA1A-230ENST00000636768 HAS3O00219 553 aa17.25■□□□□ 0.35
CACNA1A-230ENST00000636768 IQCF3P0C7M6 154 aa17.25■□□□□ 0.35
CACNA1A-230ENST00000636768 GRIN2CQ14957 1233 aa17.25■□□□□ 0.35
CACNA1A-230ENST00000636768 UBE2SQ16763 222 aa17.25■□□□□ 0.35
CACNA1A-230ENST00000636768 NLRX1Q86UT6 975 aa17.25■□□□□ 0.35
CACNA1A-230ENST00000636768 AFAP1L1Q8TED9 768 aa17.25■□□□□ 0.35
CACNA1A-230ENST00000636768 VWCEQ96DN2 955 aa17.25■□□□□ 0.35
CACNA1A-230ENST00000636768 BRPF3Q9ULD4 1205 aa17.25■□□□□ 0.35
CACNA1A-230ENST00000636768 CNTNAP5Q8WYK1 1306 aa17.24■□□□□ 0.35
CACNA1A-230ENST00000636768 SELPP16109 830 aa17.24■□□□□ 0.35
CACNA1A-230ENST00000636768 ATP2A2P16615 1042 aaKnown RBP17.24■□□□□ 0.35
CACNA1A-230ENST00000636768 SEMA3FQ13275 785 aa17.24■□□□□ 0.35
CACNA1A-230ENST00000636768 METTL7BQ6UX53 244 aa17.24■□□□□ 0.35
CACNA1A-230ENST00000636768 CYFIP1Q7L576 1253 aa17.24■□□□□ 0.35
CACNA1A-230ENST00000636768 MAFAQ8NHW3 353 aaPredicted RBP17.24■□□□□ 0.35
CACNA1A-230ENST00000636768 JAKMIP1Q96N16 626 aaKnown RBP17.24■□□□□ 0.35
CACNA1A-230ENST00000636768 CTAGE1Q96RT6 745 aa17.24■□□□□ 0.35
CACNA1A-230ENST00000636768 BCAS3Q9H6U6 928 aa17.24■□□□□ 0.35
CACNA1A-230ENST00000636768 KIAA1217Q5T5P2 1943 aa17.23■□□□□ 0.35
CACNA1A-230ENST00000636768 H3BRB1 525 aa17.23■□□□□ 0.35
CACNA1A-230ENST00000636768 REC8O95072 547 aa17.23■□□□□ 0.35
CACNA1A-230ENST00000636768 LGALS2P05162 132 aa17.23■□□□□ 0.35
CACNA1A-230ENST00000636768 NAPAP54920 295 aa17.23■□□□□ 0.35
CACNA1A-230ENST00000636768 SP4Q02446 784 aa17.23■□□□□ 0.35
CACNA1A-230ENST00000636768 WWC2Q6AWC2 1192 aa17.23■□□□□ 0.35
CACNA1A-230ENST00000636768 LRRC8DQ7L1W4 858 aa17.23■□□□□ 0.35
CACNA1A-230ENST00000636768 DHX38Q92620 1227 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-230ENST00000636768 C16orf70Q9BSU1 422 aa17.23■□□□□ 0.35
CACNA1A-230ENST00000636768 NKX2-4Q9H2Z4 354 aa17.23■□□□□ 0.35
CACNA1A-230ENST00000636768 TUT1Q9H6E5 874 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-230ENST00000636768 EHMT1Q9H9B1 1298 aa17.23■□□□□ 0.35
CACNA1A-230ENST00000636768 SLC28A3Q9HAS3 691 aa17.23■□□□□ 0.35
CACNA1A-230ENST00000636768 CPA1P15085 419 aa17.22■□□□□ 0.35
CACNA1A-230ENST00000636768 HSPA4P34932 840 aa17.22■□□□□ 0.35
CACNA1A-230ENST00000636768 RABGGTBP53611 331 aa17.22■□□□□ 0.35
CACNA1A-230ENST00000636768 PTK7Q13308 1070 aa17.22■□□□□ 0.35
CACNA1A-230ENST00000636768 BLOC1S2Q6QNY1 142 aa17.22■□□□□ 0.35
CACNA1A-230ENST00000636768 GIMAP8Q8ND71 665 aaPredicted RBP17.22■□□□□ 0.35
CACNA1A-230ENST00000636768 GPRASP2Q96D09 838 aa17.22■□□□□ 0.35
CACNA1A-230ENST00000636768 CDHR1Q96JP9 859 aa17.22■□□□□ 0.35
CACNA1A-230ENST00000636768 SENP7Q9BQF6 1050 aa17.22■□□□□ 0.35
CACNA1A-230ENST00000636768 USP26Q9BXU7 913 aa17.22■□□□□ 0.35
CACNA1A-230ENST00000636768 PCDHA6Q9UN73 950 aa17.22■□□□□ 0.35
CACNA1A-230ENST00000636768 PCDHA8Q9Y5H6 950 aa17.22■□□□□ 0.35
CACNA1A-230ENST00000636768 V9GY48 417 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms