RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 RASGRP4Q8TDF6 673 aa7.37□□□□□ -1.23
LINC00649-220ENST00000628906 NECTIN4Q96NY8 510 aa7.37□□□□□ -1.23
LINC00649-220ENST00000628906 IFIH1Q9BYX4 1025 aaKnown RBP7.37□□□□□ -1.23
LINC00649-220ENST00000628906 POMKQ9H5K3 350 aa7.37□□□□□ -1.23
LINC00649-220ENST00000628906 VCPKMTQ9H867 229 aa7.37□□□□□ -1.23
LINC00649-220ENST00000628906 RC3H2Q9HBD1 1191 aaKnown RBP7.37□□□□□ -1.23
LINC00649-220ENST00000628906 AATFQ9NY61 560 aaKnown RBP eCLIP7.37□□□□□ -1.23
LINC00649-220ENST00000628906 SAP30BPQ9UHR5 308 aaKnown RBP7.37□□□□□ -1.23
LINC00649-220ENST00000628906 GMEB2Q9UKD1 530 aa7.37□□□□□ -1.23
LINC00649-220ENST00000628906 FBXL21Q9UKT6 434 aa7.37□□□□□ -1.23
LINC00649-220ENST00000628906 DUSP12Q9UNI6 340 aa7.37□□□□□ -1.23
LINC00649-220ENST00000628906 USTQ9Y2C2 406 aa7.37□□□□□ -1.23
LINC00649-220ENST00000628906 UBR5O95071 2799 aaPredicted RBP7.37□□□□□ -1.23
LINC00649-220ENST00000628906 A6NJR5 290 aa7.36□□□□□ -1.23
LINC00649-220ENST00000628906 USP17L12C9JPN9 530 aa7.36□□□□□ -1.23
LINC00649-220ENST00000628906 USP17L21D6R901 530 aa7.36□□□□□ -1.23
LINC00649-220ENST00000628906 F6X3S4 739 aa7.36□□□□□ -1.23
LINC00649-220ENST00000628906 ALDH1L1O75891 902 aa7.36□□□□□ -1.23
LINC00649-220ENST00000628906 DCNP07585 359 aaKnown RBP7.36□□□□□ -1.23
LINC00649-220ENST00000628906 NBPF7P0C2Y1 421 aaPredicted RBP7.36□□□□□ -1.23
LINC00649-220ENST00000628906 LIMK1P53667 647 aa7.36□□□□□ -1.23
LINC00649-220ENST00000628906 DUSP6Q16828 381 aa7.36□□□□□ -1.23
LINC00649-220ENST00000628906 ZNF618Q5T7W0 954 aa7.36□□□□□ -1.23
LINC00649-220ENST00000628906 IL31Q6EBC2 164 aa7.36□□□□□ -1.23
LINC00649-220ENST00000628906 PHLDB3Q6NSJ2 640 aa7.36□□□□□ -1.23
LINC00649-220ENST00000628906 KIAA1211Q6ZU35 1233 aa7.36□□□□□ -1.23
LINC00649-220ENST00000628906 ZNF579Q8NAF0 562 aaKnown RBP7.36□□□□□ -1.23
LINC00649-220ENST00000628906 POF1BQ8WVV4 589 aa7.36□□□□□ -1.23
LINC00649-220ENST00000628906 ZCCHC14Q8WYQ9 949 aaKnown RBP7.36□□□□□ -1.23
LINC00649-220ENST00000628906 NOL10Q9BSC4 688 aaKnown RBP7.36□□□□□ -1.23
LINC00649-220ENST00000628906 ADAM33Q9BZ11 813 aa7.36□□□□□ -1.23
LINC00649-220ENST00000628906 ZSCAN32Q9NX65 697 aa7.36□□□□□ -1.23
LINC00649-220ENST00000628906 FBXO40Q9UH90 709 aa7.36□□□□□ -1.23
LINC00649-220ENST00000628906 SIT1Q9Y3P8 196 aa7.36□□□□□ -1.23
LINC00649-220ENST00000628906 GPSM3Q9Y4H4 160 aa7.36□□□□□ -1.23
LINC00649-220ENST00000628906 FOXD2O60548 495 aaPredicted RBP7.35□□□□□ -1.23
LINC00649-220ENST00000628906 KCNK5O95279 499 aa7.35□□□□□ -1.23
LINC00649-220ENST00000628906 GLULP15104 373 aa7.35□□□□□ -1.23
LINC00649-220ENST00000628906 ADORA1P30542 326 aa7.35□□□□□ -1.23
LINC00649-220ENST00000628906 TECP42680 631 aa7.35□□□□□ -1.23
LINC00649-220ENST00000628906 RFX5P48382 616 aaPredicted RBP7.35□□□□□ -1.23
LINC00649-220ENST00000628906 ITIH3Q06033 890 aa7.35□□□□□ -1.23
LINC00649-220ENST00000628906 CSRP2Q16527 193 aa7.35□□□□□ -1.23
LINC00649-220ENST00000628906 BRDTQ58F21 947 aaPredicted RBP7.35□□□□□ -1.23
LINC00649-220ENST00000628906 SPECC1Q5M775 1068 aa7.35□□□□□ -1.23
LINC00649-220ENST00000628906 PRR23CQ6ZRP0 262 aa7.35□□□□□ -1.23
LINC00649-220ENST00000628906 TBC1D9Q6ZT07 1266 aa7.35□□□□□ -1.23
LINC00649-220ENST00000628906 CHST13Q8NET6 341 aa7.35□□□□□ -1.23
LINC00649-220ENST00000628906 RUNDC1Q96C34 613 aa7.35□□□□□ -1.23
LINC00649-220ENST00000628906 ZNF689Q96CS4 500 aaPredicted RBP7.35□□□□□ -1.23
LINC00649-220ENST00000628906 ADAM7Q9H2U9 754 aa7.35□□□□□ -1.23
LINC00649-220ENST00000628906 CYP26B1Q9NR63 512 aa7.35□□□□□ -1.23
LINC00649-220ENST00000628906 SEMA4GQ9NTN9 838 aa7.35□□□□□ -1.23
LINC00649-220ENST00000628906 CEP126Q9P2H0 1117 aa7.35□□□□□ -1.23
LINC00649-220ENST00000628906 ADGRA3Q8IWK6 1321 aa7.34□□□□□ -1.23
LINC00649-220ENST00000628906 MAP3K13O43283 966 aa7.34□□□□□ -1.23
LINC00649-220ENST00000628906 RETP07949 1114 aa7.34□□□□□ -1.23
LINC00649-220ENST00000628906 SRGAP2BP0DMP2 458 aa7.34□□□□□ -1.23
LINC00649-220ENST00000628906 CALD1Q05682 793 aaKnown RBP7.34□□□□□ -1.23
LINC00649-220ENST00000628906 GABPAQ06546 454 aa7.34□□□□□ -1.23
LINC00649-220ENST00000628906 PTK7Q13308 1070 aa7.34□□□□□ -1.23
LINC00649-220ENST00000628906 EEPD1Q7L9B9 569 aa7.34□□□□□ -1.23
LINC00649-220ENST00000628906 TTC6Q86TZ1 520 aa7.34□□□□□ -1.23
LINC00649-220ENST00000628906 TDRD5Q8NAT2 981 aaKnown RBP7.34□□□□□ -1.23
LINC00649-220ENST00000628906 KLHL23Q8NBE8 558 aa7.34□□□□□ -1.23
LINC00649-220ENST00000628906 MORC4Q8TE76 937 aa7.34□□□□□ -1.23
LINC00649-220ENST00000628906 APOL5Q9BWW9 433 aa7.34□□□□□ -1.23
LINC00649-220ENST00000628906 WDR11Q9BZH6 1224 aa7.34□□□□□ -1.23
LINC00649-220ENST00000628906 TBC1D17Q9HA65 648 aa7.34□□□□□ -1.23
LINC00649-220ENST00000628906 VTA1Q9NP79 307 aa7.34□□□□□ -1.23
LINC00649-220ENST00000628906 RAI14Q9P0K7 980 aa7.34□□□□□ -1.23
LINC00649-220ENST00000628906 HMG20BQ9P0W2 317 aa7.34□□□□□ -1.23
LINC00649-220ENST00000628906 CDH22Q9UJ99 828 aa7.34□□□□□ -1.23
LINC00649-220ENST00000628906 CELSR3Q9NYQ7 3312 aa7.34□□□□□ -1.23
LINC00649-220ENST00000628906 COL12A1Q99715 3063 aa7.33□□□□□ -1.24
LINC00649-220ENST00000628906 ITPR3Q14573 2671 aa7.33□□□□□ -1.24
LINC00649-220ENST00000628906 RBM47A0AV96 593 aaKnown RBP7.33□□□□□ -1.24
LINC00649-220ENST00000628906 MMP3P08254 477 aa7.33□□□□□ -1.24
LINC00649-220ENST00000628906 PLA2G2AP14555 144 aa7.33□□□□□ -1.24
LINC00649-220ENST00000628906 SRSF1Q07955 248 aaKnown RBP eCLIP7.33□□□□□ -1.24
LINC00649-220ENST00000628906 LAIR1Q6GTX8 287 aa7.33□□□□□ -1.24
LINC00649-220ENST00000628906 CES5AQ6NT32 575 aa7.33□□□□□ -1.24
LINC00649-220ENST00000628906 FBXO16Q8IX29 292 aaPredicted RBP7.33□□□□□ -1.24
LINC00649-220ENST00000628906 CCDC146Q8IYE0 955 aa7.33□□□□□ -1.24
LINC00649-220ENST00000628906 SEPT8Q92599 483 aa7.33□□□□□ -1.24
LINC00649-220ENST00000628906 WNT8BQ93098 351 aa7.33□□□□□ -1.24
LINC00649-220ENST00000628906 LSM14BQ9BX40 385 aaKnown RBP7.33□□□□□ -1.24
LINC00649-220ENST00000628906 SH2D4AQ9H788 454 aa7.33□□□□□ -1.24
LINC00649-220ENST00000628906 KCNK12Q9HB15 430 aa7.33□□□□□ -1.24
LINC00649-220ENST00000628906 ARHGEF10LQ9HCE6 1279 aa7.33□□□□□ -1.24
LINC00649-220ENST00000628906 GTF2IRD1Q9UHL9 959 aa7.33□□□□□ -1.24
LINC00649-220ENST00000628906 DDX49Q9Y6V7 483 aaKnown RBP7.33□□□□□ -1.24
LINC00649-220ENST00000628906 FOCADQ5VW36 1801 aa7.33□□□□□ -1.24
LINC00649-220ENST00000628906 NOTCH2Q04721 2471 aa7.32□□□□□ -1.24
LINC00649-220ENST00000628906 RSPH10B2B2RC85 870 aa7.32□□□□□ -1.24
LINC00649-220ENST00000628906 E9PSI1 815 aa7.32□□□□□ -1.24
LINC00649-220ENST00000628906 ARHGAP6O43182 974 aa7.32□□□□□ -1.24
LINC00649-220ENST00000628906 LAMTOR5O43504 91 aa7.32□□□□□ -1.24
LINC00649-220ENST00000628906 CIAO1O76071 339 aa7.32□□□□□ -1.24
LINC00649-220ENST00000628906 EOMESO95936 686 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms