RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 HOXA13P31271 388 aaPredicted RBP14.43□□□□□ -0.1
SOX2-OT-247ENST00000628347 MFSD10Q14728 455 aa14.43□□□□□ -0.1
SOX2-OT-247ENST00000628347 PPP2R2DQ66LE6 453 aa14.43□□□□□ -0.1
SOX2-OT-247ENST00000628347 IL31RAQ8NI17 732 aa14.43□□□□□ -0.1
SOX2-OT-247ENST00000628347 DHX38Q92620 1227 aaKnown RBP14.43□□□□□ -0.1
SOX2-OT-247ENST00000628347 SYMPKQ92797 1274 aaKnown RBP14.43□□□□□ -0.1
SOX2-OT-247ENST00000628347 SPZ1Q9BXG8 430 aa14.43□□□□□ -0.1
SOX2-OT-247ENST00000628347 LY9Q9HBG7 655 aa14.43□□□□□ -0.1
SOX2-OT-247ENST00000628347 HDAC6Q9UBN7 1215 aa14.43□□□□□ -0.1
SOX2-OT-247ENST00000628347 TRANK1O15050 2925 aa14.43□□□□□ -0.1
SOX2-OT-247ENST00000628347 STAM2O75886 525 aa14.42□□□□□ -0.1
SOX2-OT-247ENST00000628347 GGPS1O95749 300 aa14.42□□□□□ -0.1
SOX2-OT-247ENST00000628347 CXCL10P02778 98 aa14.42□□□□□ -0.1
SOX2-OT-247ENST00000628347 MYOGP15173 224 aa14.42□□□□□ -0.1
SOX2-OT-247ENST00000628347 UBA1P22314 1058 aaKnown RBP14.42□□□□□ -0.1
SOX2-OT-247ENST00000628347 ICAM3P32942 547 aa14.42□□□□□ -0.1
SOX2-OT-247ENST00000628347 IRX6P78412 446 aaPredicted RBP14.42□□□□□ -0.1
SOX2-OT-247ENST00000628347 PTK7Q13308 1070 aa14.42□□□□□ -0.1
SOX2-OT-247ENST00000628347 GPNMBQ14956 572 aa14.42□□□□□ -0.1
SOX2-OT-247ENST00000628347 KIAA0753Q2KHM9 967 aa14.42□□□□□ -0.1
SOX2-OT-247ENST00000628347 C7orf31Q8N865 590 aa14.42□□□□□ -0.1
SOX2-OT-247ENST00000628347 FTOQ9C0B1 505 aaKnown RBP eCLIP14.42□□□□□ -0.1
SOX2-OT-247ENST00000628347 ZNF286BP0CG31 522 aa14.41□□□□□ -0.1
SOX2-OT-247ENST00000628347 CKBP12277 381 aa14.41□□□□□ -0.1
SOX2-OT-247ENST00000628347 KIF5BP33176 963 aa14.41□□□□□ -0.1
SOX2-OT-247ENST00000628347 CHMP4BP1P59074 171 aa14.41□□□□□ -0.1
SOX2-OT-247ENST00000628347 SP2Q02086 613 aa14.41□□□□□ -0.1
SOX2-OT-247ENST00000628347 TRIM71Q2Q1W2 868 aaKnown RBP14.41□□□□□ -0.1
SOX2-OT-247ENST00000628347 HSDL1Q3SXM5 330 aa14.41□□□□□ -0.1
SOX2-OT-247ENST00000628347 TJAP1Q5JTD0 557 aa14.41□□□□□ -0.1
SOX2-OT-247ENST00000628347 LRRC8DQ7L1W4 858 aa14.41□□□□□ -0.1
SOX2-OT-247ENST00000628347 ZNF654Q8IZM8 581 aa14.41□□□□□ -0.1
SOX2-OT-247ENST00000628347 TMTC2Q8N394 836 aa14.41□□□□□ -0.1
SOX2-OT-247ENST00000628347 TMEM87BQ96K49 555 aa14.41□□□□□ -0.1
SOX2-OT-247ENST00000628347 SPATA33Q96N06 139 aa14.41□□□□□ -0.1
SOX2-OT-247ENST00000628347 INPP4AQ96PE3 977 aaPredicted RBP14.41□□□□□ -0.1
SOX2-OT-247ENST00000628347 LZTS2Q9BRK4 669 aa14.41□□□□□ -0.1
SOX2-OT-247ENST00000628347 ALG1Q9BT22 464 aa14.41□□□□□ -0.1
SOX2-OT-247ENST00000628347 LSG1Q9H089 658 aaKnown RBP14.41□□□□□ -0.1
SOX2-OT-247ENST00000628347 PTPRSQ13332 1948 aa14.41□□□□□ -0.1
SOX2-OT-247ENST00000628347 CA3P07451 260 aa14.4□□□□□ -0.1
SOX2-OT-247ENST00000628347 POU3F3P20264 500 aaPredicted RBP14.4□□□□□ -0.1
SOX2-OT-247ENST00000628347 GNAQP50148 359 aa14.4□□□□□ -0.1
SOX2-OT-247ENST00000628347 MRPS9P82933 396 aaKnown RBP14.4□□□□□ -0.1
SOX2-OT-247ENST00000628347 GNPTABQ3T906 1256 aa14.4□□□□□ -0.1
SOX2-OT-247ENST00000628347 CNKSR3Q6P9H4 555 aa14.4□□□□□ -0.1
SOX2-OT-247ENST00000628347 TRAF7Q6Q0C0 670 aa14.4□□□□□ -0.1
SOX2-OT-247ENST00000628347 CASC1Q6TDU7 716 aa14.4□□□□□ -0.1
SOX2-OT-247ENST00000628347 FCHSD1Q86WN1 690 aa14.4□□□□□ -0.1
SOX2-OT-247ENST00000628347 HERC6Q8IVU3 1022 aa14.4□□□□□ -0.1
SOX2-OT-247ENST00000628347 CTCFLQ8NI51 663 aaPredicted RBP14.4□□□□□ -0.1
SOX2-OT-247ENST00000628347 ATXN2LQ8WWM7 1075 aaKnown RBP14.4□□□□□ -0.1
SOX2-OT-247ENST00000628347 C16orf70Q9BSU1 422 aa14.4□□□□□ -0.1
SOX2-OT-247ENST00000628347 MUC3AQ02505 3323 aa14.4□□□□□ -0.1
SOX2-OT-247ENST00000628347 KIF28PB7ZC32 967 aa14.39□□□□□ -0.11
SOX2-OT-247ENST00000628347 PIK3CDO00329 1044 aa14.39□□□□□ -0.11
SOX2-OT-247ENST00000628347 SH2B2O14492 632 aaPredicted RBP14.39□□□□□ -0.11
SOX2-OT-247ENST00000628347 PRC1O43663 620 aa14.39□□□□□ -0.11
SOX2-OT-247ENST00000628347 NBNO60934 754 aa14.39□□□□□ -0.11
SOX2-OT-247ENST00000628347 IGFBP4P22692 258 aa14.39□□□□□ -0.11
SOX2-OT-247ENST00000628347 HOXC8P31273 242 aa14.39□□□□□ -0.11
SOX2-OT-247ENST00000628347 MCM5P33992 734 aa14.39□□□□□ -0.11
SOX2-OT-247ENST00000628347 LIFRP42702 1097 aa14.39□□□□□ -0.11
SOX2-OT-247ENST00000628347 KCNJ6P48051 423 aa14.39□□□□□ -0.11
SOX2-OT-247ENST00000628347 XRRA1Q6P2D8 792 aa14.39□□□□□ -0.11
SOX2-OT-247ENST00000628347 GPKOWQ92917 476 aaPredicted RBP eCLIP14.39□□□□□ -0.11
SOX2-OT-247ENST00000628347 RRP36Q96EU6 259 aaKnown RBP14.39□□□□□ -0.11
SOX2-OT-247ENST00000628347 ESYT1Q9BSJ8 1104 aa14.39□□□□□ -0.11
SOX2-OT-247ENST00000628347 MLXIPQ9HAP2 919 aa14.39□□□□□ -0.11
SOX2-OT-247ENST00000628347 PRDM6Q9NQX0 595 aa14.39□□□□□ -0.11
SOX2-OT-247ENST00000628347 THEGQ9P2T0 379 aa14.39□□□□□ -0.11
SOX2-OT-247ENST00000628347 SPATA31C2B4DYI2 1134 aa14.38□□□□□ -0.11
SOX2-OT-247ENST00000628347 SLC27A2O14975 620 aa14.38□□□□□ -0.11
SOX2-OT-247ENST00000628347 FIBPO43427 364 aa14.38□□□□□ -0.11
SOX2-OT-247ENST00000628347 EFCAB14O75071 495 aa14.38□□□□□ -0.11
SOX2-OT-247ENST00000628347 CALM1P0DP23 149 aa14.38□□□□□ -0.11
SOX2-OT-247ENST00000628347 CALM2P0DP24 149 aa14.38□□□□□ -0.11
SOX2-OT-247ENST00000628347 CALM3P0DP25 149 aa14.38□□□□□ -0.11
SOX2-OT-247ENST00000628347 WDR5P61964 334 aaKnown RBP14.38□□□□□ -0.11
SOX2-OT-247ENST00000628347 SEMA3FQ13275 785 aa14.38□□□□□ -0.11
SOX2-OT-247ENST00000628347 NEDD9Q14511 834 aa14.38□□□□□ -0.11
SOX2-OT-247ENST00000628347 HIC1Q14526 733 aa14.38□□□□□ -0.11
SOX2-OT-247ENST00000628347 PCNX4Q63HM2 1172 aa14.38□□□□□ -0.11
SOX2-OT-247ENST00000628347 METTL7BQ6UX53 244 aa14.38□□□□□ -0.11
SOX2-OT-247ENST00000628347 SERINC5Q86VE9 423 aa14.38□□□□□ -0.11
SOX2-OT-247ENST00000628347 PPM1EQ8WY54 764 aa14.38□□□□□ -0.11
SOX2-OT-247ENST00000628347 WNT8BQ93098 351 aa14.38□□□□□ -0.11
SOX2-OT-247ENST00000628347 SENP7Q9BQF6 1050 aa14.38□□□□□ -0.11
SOX2-OT-247ENST00000628347 SEC63Q9UGP8 760 aaKnown RBP14.38□□□□□ -0.11
SOX2-OT-247ENST00000628347 ABHD14A-ACY1A0A1B0GW23 586 aa14.37□□□□□ -0.11
SOX2-OT-247ENST00000628347 CCDC69A6NI79 296 aa14.37□□□□□ -0.11
SOX2-OT-247ENST00000628347 H3BRB1 525 aa14.37□□□□□ -0.11
SOX2-OT-247ENST00000628347 MEIS2O14770 477 aa14.37□□□□□ -0.11
SOX2-OT-247ENST00000628347 PLEKHA8P1O95397 391 aa14.37□□□□□ -0.11
SOX2-OT-247ENST00000628347 LGALS2P05162 132 aa14.37□□□□□ -0.11
SOX2-OT-247ENST00000628347 ZNF200P98182 395 aaPredicted RBP14.37□□□□□ -0.11
SOX2-OT-247ENST00000628347 TAP1Q03518 808 aa14.37□□□□□ -0.11
SOX2-OT-247ENST00000628347 NECTIN1Q15223 517 aa14.37□□□□□ -0.11
SOX2-OT-247ENST00000628347 ZNF618Q5T7W0 954 aa14.37□□□□□ -0.11
SOX2-OT-247ENST00000628347 CREB3L3Q68CJ9 461 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms