RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 CEP85LQ5SZL2 805 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 RC3H1Q5TC82 1133 aaKnown RBP4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 C8orf74Q6P047 294 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 CCDC121Q6ZUS5 278 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 ZSCAN29Q8IWY8 852 aaPredicted RBP4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 PARP9Q8IXQ6 854 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 CCDC13Q8IYE1 715 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 TEX11Q8IYF3 940 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 SMYD4Q8IYR2 804 aaPredicted RBP4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 ZNF654Q8IZM8 581 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 FUKQ8N0W3 1084 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 MAB21L3Q8N8X9 362 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 PIK3R5Q8WYR1 880 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 FAM89AQ96GI7 184 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 SGSM3Q96HU1 749 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 NAPBQ9H115 298 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 KDM4CQ9H3R0 1056 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 GREM2Q9H772 168 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 MAGEF1Q9HAY2 307 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 ATP6V0A4Q9HBG4 840 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 PLCB1Q9NQ66 1216 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 BATF3Q9NR55 127 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 VPS54Q9P1Q0 977 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 PCDHA13Q9Y5I0 950 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 KIF13BQ9NQT8 1826 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 COL1A1P02452 1464 aaPredicted RBP4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 GREB1LQ9C091 1923 aaPredicted RBP4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 SSU72P8A0A1W2PR75 194 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 GMNCA6NCL1 334 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 ZNF233A6NK53 670 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 PSMA7O14818 248 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 KLRC4O43908 158 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 MGRN1O60291 552 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 CALM1P0DP23 149 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 CALM2P0DP24 149 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 CALM3P0DP25 149 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 MYBP10242 640 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 EZRP15311 586 aaKnown RBP4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 PDE6AP16499 860 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 ITGA6P23229 1130 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 IRX1P78414 480 aaPredicted RBP4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 LMNB2Q03252 620 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 TBC1D8BQ0IIM8 1120 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 FUT2Q10981 343 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 PTGDRQ13258 359 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 BIRC3Q13489 604 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 SLMAPQ14BN4 828 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 SEC23AQ15436 765 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 EZH2Q15910 746 aaKnown RBP4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 CDC37Q16543 378 aaPredicted RBP4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 SKIDA1Q1XH10 827 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 SPDYCQ5MJ68 293 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 CCDC181Q5TID7 509 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 TTI2Q6NXR4 508 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 FOXR2Q6PJQ5 311 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 CLEC4GQ6UXB4 293 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 RUFY4Q6ZNE9 571 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 GIMAP8Q8ND71 665 aaPredicted RBP4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 ANKK1Q8NFD2 765 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 CCHCR1Q8TD31 782 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 HDAC7Q8WUI4 952 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 CENPTQ96BT3 561 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 HOOK2Q96ED9 719 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 CCDC114Q96M63 670 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 CCDC42Q96M95 316 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 CCDC43Q96MW1 224 aaKnown RBP4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 GDAP1L1Q96MZ0 367 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 TUBGCP2Q9BSJ2 902 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 MYL10Q9BUA6 226 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 CCSER1Q9C0I3 900 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 CUEDC2Q9H467 287 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 EPB41L4AQ9HCS5 686 aaPredicted RBP4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 CD248Q9HCU0 757 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 AGPAT5Q9NUQ2 364 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 LRWD1Q9UFC0 647 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 DDX20Q9UHI6 824 aaKnown RBP4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 ANAPC4Q9UJX5 808 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 TACC3Q9Y6A5 838 aa4.61□□□□□ -1.67
PTP4A1-205ENST00000626021 A0A1B0GUA9 196 aa4.6□□□□□ -1.67
PTP4A1-205ENST00000626021 GSG1L2A8MUP6 293 aa4.6□□□□□ -1.67
PTP4A1-205ENST00000626021 RBAK-RBAKDNI3L0D1 243 aa4.6□□□□□ -1.67
PTP4A1-205ENST00000626021 ZNF263O14978 683 aa4.6□□□□□ -1.67
PTP4A1-205ENST00000626021 RTN2O75298 545 aa4.6□□□□□ -1.67
PTP4A1-205ENST00000626021 GSTA1P08263 222 aa4.6□□□□□ -1.67
PTP4A1-205ENST00000626021 PCP11498 1178 aaKnown RBP4.6□□□□□ -1.67
PTP4A1-205ENST00000626021 TRIM21P19474 475 aaKnown RBP4.6□□□□□ -1.67
PTP4A1-205ENST00000626021 MLLT3P42568 568 aaPredicted RBP4.6□□□□□ -1.67
PTP4A1-205ENST00000626021 MAGEA1P43355 309 aa4.6□□□□□ -1.67
PTP4A1-205ENST00000626021 HDLBPQ00341 1268 aaKnown RBP4.6□□□□□ -1.67
PTP4A1-205ENST00000626021 RIPK1Q13546 671 aa4.6□□□□□ -1.67
PTP4A1-205ENST00000626021 PUM3Q15397 648 aaKnown RBP4.6□□□□□ -1.67
PTP4A1-205ENST00000626021 NPY5RQ15761 445 aa4.6□□□□□ -1.67
PTP4A1-205ENST00000626021 ZKSCAN8Q15776 578 aaPredicted RBP4.6□□□□□ -1.67
PTP4A1-205ENST00000626021 ASTE1Q2TB18 679 aaPredicted RBP4.6□□□□□ -1.67
PTP4A1-205ENST00000626021 C11orf91Q3C1V1 193 aa4.6□□□□□ -1.67
PTP4A1-205ENST00000626021 ANKRD20A8PQ5CZ79 823 aa4.6□□□□□ -1.67
PTP4A1-205ENST00000626021 EARS2Q5JPH6 523 aaKnown RBP4.6□□□□□ -1.67
PTP4A1-205ENST00000626021 RNF187Q5TA31 235 aaPredicted RBP4.6□□□□□ -1.67
PTP4A1-205ENST00000626021 KLHDC7AQ5VTJ3 777 aa4.6□□□□□ -1.67
PTP4A1-205ENST00000626021 CYB5D1Q6P9G0 228 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms