RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 PRLRP16471 622 aa16.85■□□□□ 0.29
LINC00552-201ENST00000625151 MATR3P43243 847 aaKnown RBP eCLIP16.85■□□□□ 0.29
LINC00552-201ENST00000625151 RHBDL3P58872 404 aa16.85■□□□□ 0.29
LINC00552-201ENST00000625151 GFPT1Q06210 699 aaPredicted RBP16.85■□□□□ 0.29
LINC00552-201ENST00000625151 EHHADHQ08426 723 aa16.85■□□□□ 0.29
LINC00552-201ENST00000625151 TMEM266Q2M3C6 531 aa16.85■□□□□ 0.29
LINC00552-201ENST00000625151 SNX29Q8TEQ0 813 aa16.85■□□□□ 0.29
LINC00552-201ENST00000625151 MAGEA1P43355 309 aa16.84■□□□□ 0.29
LINC00552-201ENST00000625151 NOVP48745 357 aa16.84■□□□□ 0.29
LINC00552-201ENST00000625151 SLC7A5Q01650 507 aa16.84■□□□□ 0.29
LINC00552-201ENST00000625151 ITIH3Q06033 890 aa16.84■□□□□ 0.29
LINC00552-201ENST00000625151 ECM1Q16610 540 aa16.84■□□□□ 0.29
LINC00552-201ENST00000625151 ASTE1Q2TB18 679 aaPredicted RBP16.84■□□□□ 0.29
LINC00552-201ENST00000625151 CCDC70Q6NSX1 233 aa16.84■□□□□ 0.29
LINC00552-201ENST00000625151 PDXDC1Q6P996 788 aa16.84■□□□□ 0.29
LINC00552-201ENST00000625151 ALS2CR12Q96Q35 445 aa16.84■□□□□ 0.29
LINC00552-201ENST00000625151 HYOU1Q9Y4L1 999 aa16.84■□□□□ 0.29
LINC00552-201ENST00000625151 FOCADQ5VW36 1801 aa16.84■□□□□ 0.29
LINC00552-201ENST00000625151 GOLGA6BA6NDN3 693 aa16.84■□□□□ 0.29
LINC00552-201ENST00000625151 FGFR1OPO95684 399 aaKnown RBP16.84■□□□□ 0.29
LINC00552-201ENST00000625151 ADCY7P51828 1080 aa16.84■□□□□ 0.29
LINC00552-201ENST00000625151 EN1Q05925 392 aaPredicted RBP16.84■□□□□ 0.29
LINC00552-201ENST00000625151 KCNMA1Q12791 1236 aa16.84■□□□□ 0.29
LINC00552-201ENST00000625151 SND1Q7KZF4 910 aaKnown RBP eCLIP16.84■□□□□ 0.29
LINC00552-201ENST00000625151 COL23A1Q86Y22 540 aaPredicted RBP16.84■□□□□ 0.29
LINC00552-201ENST00000625151 MTMR8Q96EF0 704 aa16.84■□□□□ 0.29
LINC00552-201ENST00000625151 RASSF4Q9H2L5 321 aa16.84■□□□□ 0.29
LINC00552-201ENST00000625151 CD209Q9NNX6 404 aa16.84■□□□□ 0.29
LINC00552-201ENST00000625151 PJA2O43164 708 aa16.84■□□□□ 0.29
LINC00552-201ENST00000625151 CHRM1P11229 460 aaPredicted RBP16.84■□□□□ 0.29
LINC00552-201ENST00000625151 GPSM2P81274 684 aa16.84■□□□□ 0.29
LINC00552-201ENST00000625151 RASSF7Q02833 373 aa16.84■□□□□ 0.29
LINC00552-201ENST00000625151 TMEM119Q4V9L6 283 aa16.84■□□□□ 0.29
LINC00552-201ENST00000625151 HGSNATQ68CP4 663 aa16.84■□□□□ 0.29
LINC00552-201ENST00000625151 GJA10Q969M2 543 aa16.84■□□□□ 0.29
LINC00552-201ENST00000625151 RSPH14Q9UHP6 348 aa16.84■□□□□ 0.29
LINC00552-201ENST00000625151 TCP1P17987 556 aaKnown RBP16.83■□□□□ 0.28
LINC00552-201ENST00000625151 SLC1A4P43007 532 aa16.83■□□□□ 0.28
LINC00552-201ENST00000625151 PDIA5Q14554 519 aa16.83■□□□□ 0.28
LINC00552-201ENST00000625151 LRRC47Q8N1G4 583 aaKnown RBP16.83■□□□□ 0.28
LINC00552-201ENST00000625151 TLR10Q9BXR5 811 aa16.83■□□□□ 0.28
LINC00552-201ENST00000625151 TANGO6Q9C0B7 1094 aa16.83■□□□□ 0.28
LINC00552-201ENST00000625151 ARFGEF1Q9Y6D6 1849 aa16.83■□□□□ 0.28
LINC00552-201ENST00000625151 VGLL3A8MV65 326 aa16.83■□□□□ 0.28
LINC00552-201ENST00000625151 BUB1O43683 1085 aa16.83■□□□□ 0.28
LINC00552-201ENST00000625151 TNNI2P48788 182 aa16.83■□□□□ 0.28
LINC00552-201ENST00000625151 DDR1Q08345 913 aa16.83■□□□□ 0.28
LINC00552-201ENST00000625151 KRT79Q5XKE5 535 aa16.83■□□□□ 0.28
LINC00552-201ENST00000625151 HAUS3Q68CZ6 603 aa16.83■□□□□ 0.28
LINC00552-201ENST00000625151 CACNA2D4Q7Z3S7 1137 aa16.83■□□□□ 0.28
LINC00552-201ENST00000625151 CLEC10AQ8IUN9 316 aa16.83■□□□□ 0.28
LINC00552-201ENST00000625151 TRIM34Q9BYJ4 488 aa16.83■□□□□ 0.28
LINC00552-201ENST00000625151 RAB34Q9BZG1 259 aa16.83■□□□□ 0.28
LINC00552-201ENST00000625151 hCG_1984214I3L0E3 225 aa16.82■□□□□ 0.28
LINC00552-201ENST00000625151 EIF6P56537 245 aaKnown RBP16.82■□□□□ 0.28
LINC00552-201ENST00000625151 UBE2SQ16763 222 aa16.82■□□□□ 0.28
LINC00552-201ENST00000625151 KLHDC7AQ5VTJ3 777 aa16.82■□□□□ 0.28
LINC00552-201ENST00000625151 C15orf52Q6ZUT6 534 aaKnown RBP16.82■□□□□ 0.28
LINC00552-201ENST00000625151 TMC4Q7Z404 712 aa16.82■□□□□ 0.28
LINC00552-201ENST00000625151 CERS3Q8IU89 383 aa16.82■□□□□ 0.28
LINC00552-201ENST00000625151 ZNF713Q8N859 430 aaPredicted RBP16.82■□□□□ 0.28
LINC00552-201ENST00000625151 DNAJC19Q96DA6 116 aa16.82■□□□□ 0.28
LINC00552-201ENST00000625151 NLRC4Q9NPP4 1024 aa16.82■□□□□ 0.28
LINC00552-201ENST00000625151 UFL1O94874 794 aa16.82■□□□□ 0.28
LINC00552-201ENST00000625151 COASYQ13057 564 aa16.82■□□□□ 0.28
LINC00552-201ENST00000625151 MAPK8IP2Q13387 824 aaPredicted RBP16.82■□□□□ 0.28
LINC00552-201ENST00000625151 ZCWPW2Q504Y3 356 aa16.82■□□□□ 0.28
LINC00552-201ENST00000625151 CCDC181Q5TID7 509 aa16.82■□□□□ 0.28
LINC00552-201ENST00000625151 PRR5LQ6MZQ0 368 aa16.82■□□□□ 0.28
LINC00552-201ENST00000625151 TSG101Q99816 390 aa16.82■□□□□ 0.28
LINC00552-201ENST00000625151 FGFBP2Q9BYJ0 223 aa16.82■□□□□ 0.28
LINC00552-201ENST00000625151 GOLGA6CA6NDK9 693 aa16.81■□□□□ 0.28
LINC00552-201ENST00000625151 TLR2O60603 784 aa16.81■□□□□ 0.28
LINC00552-201ENST00000625151 GOLGA6DP0CG33 693 aa16.81■□□□□ 0.28
LINC00552-201ENST00000625151 PSMD2Q13200 908 aa16.81■□□□□ 0.28
LINC00552-201ENST00000625151 TDRD12Q587J7 1177 aaKnown RBP16.81■□□□□ 0.28
LINC00552-201ENST00000625151 MYOCDQ8IZQ8 938 aa16.81■□□□□ 0.28
LINC00552-201ENST00000625151 FAM76AQ8TAV0 307 aa16.81■□□□□ 0.28
LINC00552-201ENST00000625151 GPCPD1Q9NPB8 672 aa16.81■□□□□ 0.28
LINC00552-201ENST00000625151 RIC8AQ9NPQ8 531 aa16.81■□□□□ 0.28
LINC00552-201ENST00000625151 RBM12Q9NTZ6 932 aaKnown RBP16.81■□□□□ 0.28
LINC00552-201ENST00000625151 GOLGA6AQ9NYA3 693 aa16.81■□□□□ 0.28
LINC00552-201ENST00000625151 MTMR4Q9NYA4 1195 aa16.81■□□□□ 0.28
LINC00552-201ENST00000625151 SSU72P8A0A1W2PR75 194 aa16.81■□□□□ 0.28
LINC00552-201ENST00000625151 SHOX2O60902 331 aaPredicted RBP16.81■□□□□ 0.28
LINC00552-201ENST00000625151 PPFIA4O75335 1185 aa16.81■□□□□ 0.28
LINC00552-201ENST00000625151 NOL4O94818 638 aa16.81■□□□□ 0.28
LINC00552-201ENST00000625151 PLCG2P16885 1265 aa16.81■□□□□ 0.28
LINC00552-201ENST00000625151 BRD2P25440 801 aaKnown RBP16.81■□□□□ 0.28
LINC00552-201ENST00000625151 MFSD14BQ5SR56 506 aa16.81■□□□□ 0.28
LINC00552-201ENST00000625151 RUBCNQ92622 972 aa16.81■□□□□ 0.28
LINC00552-201ENST00000625151 HAS1Q92839 578 aa16.81■□□□□ 0.28
LINC00552-201ENST00000625151 MS4A14Q96JA4 679 aa16.81■□□□□ 0.28
LINC00552-201ENST00000625151 STIM2Q9P246 746 aa16.81■□□□□ 0.28
LINC00552-201ENST00000625151 COL4A3BPQ9Y5P4 624 aa16.81■□□□□ 0.28
LINC00552-201ENST00000625151 PPP1R11O60927 126 aaPredicted RBP16.8■□□□□ 0.28
LINC00552-201ENST00000625151 APBA1Q02410 837 aa16.8■□□□□ 0.28
LINC00552-201ENST00000625151 TSEN2Q8NCE0 465 aaKnown RBP16.8■□□□□ 0.28
LINC00552-201ENST00000625151 NOX5Q96PH1 765 aa16.8■□□□□ 0.28
LINC00552-201ENST00000625151 CAMKK2Q96RR4 588 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms