RNA–Protein interactions for RNA: ENST00000622875.4

EBF1-211, Transcript of early B cell factor 1, humanhuman

TSL 5 BASIC

Gene EBF1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-211ENST00000622875 TTC19Q6DKK2 380 aaPredicted RBP6.34□□□□□ -1.4
EBF1-211ENST00000622875 IQCF2Q8IXL9 164 aa6.34□□□□□ -1.4
EBF1-211ENST00000622875 CCDC110Q8TBZ0 833 aa6.34□□□□□ -1.4
EBF1-211ENST00000622875 SREK1Q8WXA9 508 aaKnown RBP6.34□□□□□ -1.4
EBF1-211ENST00000622875 FAM89AQ96GI7 184 aa6.34□□□□□ -1.4
EBF1-211ENST00000622875 OSBPL9Q96SU4 736 aa6.34□□□□□ -1.4
EBF1-211ENST00000622875 SCN5AQ14524 2016 aa6.34□□□□□ -1.4
EBF1-211ENST00000622875 RIOK3O14730 519 aaKnown RBP6.33□□□□□ -1.4
EBF1-211ENST00000622875 ADAMTS4O75173 837 aa6.33□□□□□ -1.4
EBF1-211ENST00000622875 ERCC5P28715 1186 aaPredicted RBP6.33□□□□□ -1.4
EBF1-211ENST00000622875 CNGA1P29973 690 aa6.33□□□□□ -1.4
EBF1-211ENST00000622875 SLC8A1P32418 973 aa6.33□□□□□ -1.4
EBF1-211ENST00000622875 ERVK-9P63128 1117 aa6.33□□□□□ -1.4
EBF1-211ENST00000622875 ERVK-24P63145 666 aa6.33□□□□□ -1.4
EBF1-211ENST00000622875 ATP2B2Q01814 1243 aa6.33□□□□□ -1.4
EBF1-211ENST00000622875 UBALD2Q8IYN6 164 aa6.33□□□□□ -1.4
EBF1-211ENST00000622875 SUMF1Q8NBK3 374 aa6.33□□□□□ -1.4
EBF1-211ENST00000622875 SLX1AQ9BQ83 275 aa6.33□□□□□ -1.4
EBF1-211ENST00000622875 PAGR1Q9BTK6 254 aa6.33□□□□□ -1.4
EBF1-211ENST00000622875 VCX3BQ9H321 246 aa6.33□□□□□ -1.4
EBF1-211ENST00000622875 TSPY26PQ9H489 355 aa6.33□□□□□ -1.4
EBF1-211ENST00000622875 CERS4Q9HA82 394 aa6.33□□□□□ -1.4
EBF1-211ENST00000622875 GNL3LQ9NVN8 582 aaKnown RBP6.33□□□□□ -1.4
EBF1-211ENST00000622875 DBF4Q9UBU7 674 aaPredicted RBP6.33□□□□□ -1.4
EBF1-211ENST00000622875 OTOGLQ3ZCN5 2332 aa6.33□□□□□ -1.4
EBF1-211ENST00000622875 A0A087WUV0 522 aaPredicted RBP6.33□□□□□ -1.4
EBF1-211ENST00000622875 PDE8AO60658 829 aa6.33□□□□□ -1.4
EBF1-211ENST00000622875 VIMP08670 466 aaKnown RBP6.33□□□□□ -1.4
EBF1-211ENST00000622875 RFC2P35250 354 aa6.33□□□□□ -1.4
EBF1-211ENST00000622875 NKX3-2P78367 333 aa6.33□□□□□ -1.4
EBF1-211ENST00000622875 TERF2Q15554 542 aa6.33□□□□□ -1.4
EBF1-211ENST00000622875 CCDC70Q6NSX1 233 aa6.33□□□□□ -1.4
EBF1-211ENST00000622875 MYLK4Q86YV6 388 aaPredicted RBP6.33□□□□□ -1.4
EBF1-211ENST00000622875 MSANTD4Q8NCY6 345 aa6.33□□□□□ -1.4
EBF1-211ENST00000622875 CYP2W1Q8TAV3 490 aa6.33□□□□□ -1.4
EBF1-211ENST00000622875 TTC14Q96N46 770 aa6.33□□□□□ -1.4
EBF1-211ENST00000622875 MIS18AQ9NYP9 233 aa6.33□□□□□ -1.4
EBF1-211ENST00000622875 DKK3Q9UBP4 350 aa6.33□□□□□ -1.4
EBF1-211ENST00000622875 KIF28PB7ZC32 967 aa6.33□□□□□ -1.4
EBF1-211ENST00000622875 COQ9O75208 318 aa6.33□□□□□ -1.4
EBF1-211ENST00000622875 SKILP12757 684 aa6.33□□□□□ -1.4
EBF1-211ENST00000622875 KLRK1P26718 216 aa6.33□□□□□ -1.4
EBF1-211ENST00000622875 EIF4G2P78344 907 aaKnown RBP eCLIP6.33□□□□□ -1.4
EBF1-211ENST00000622875 LRRFIP1Q32MZ4 808 aaKnown RBP6.33□□□□□ -1.4
EBF1-211ENST00000622875 CCDC40Q4G0X9 1142 aa6.33□□□□□ -1.4
EBF1-211ENST00000622875 OTOP2Q7RTS6 562 aa6.33□□□□□ -1.4
EBF1-211ENST00000622875 DDX1Q92499 740 aaKnown RBP6.33□□□□□ -1.4
EBF1-211ENST00000622875 TMX1Q9H3N1 280 aa6.33□□□□□ -1.4
EBF1-211ENST00000622875 TXNRD2Q9NNW7 524 aa6.33□□□□□ -1.4
EBF1-211ENST00000622875 FOXD4L1Q9NU39 408 aa6.33□□□□□ -1.4
EBF1-211ENST00000622875 CTNND1O60716 968 aaKnown RBP6.32□□□□□ -1.4
EBF1-211ENST00000622875 TPP2P29144 1249 aaPredicted RBP6.32□□□□□ -1.4
EBF1-211ENST00000622875 KIF5BP33176 963 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 ACLYP53396 1101 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 EIF2B5Q13144 721 aaKnown RBP6.32□□□□□ -1.4
EBF1-211ENST00000622875 TUBA3CQ13748 450 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 PTPROQ16827 1216 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 UNQ6494/PRO21346Q6UXR6 183 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 PPP4R3CPQ6ZMV5 832 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 IQCA1Q86XH1 822 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 NPLOC4Q8TAT6 608 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.32□□□□□ -1.4
EBF1-211ENST00000622875 LZTS2Q9BRK4 669 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 HOMER3Q9NSC5 361 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 TMOD2Q9NZR1 351 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 RBPJLQ9UBG7 517 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 HELZ2Q9BYK8 2649 aaKnown RBP6.32□□□□□ -1.4
EBF1-211ENST00000622875 MYO1CO00159 1063 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 TUBB4BP68371 445 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 BRD3Q15059 726 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 ANGPT1Q15389 498 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 SMC5Q8IY18 1101 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 CHMP4CQ96CF2 233 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 TGS1Q96RS0 853 aaKnown RBP6.32□□□□□ -1.4
EBF1-211ENST00000622875 STARD7Q9NQZ5 370 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 ATP8A1Q9Y2Q0 1164 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 ARVCFO00192 962 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 ATP8B1O43520 1251 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 DIAPH2O60879 1101 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 BAIAP3O94812 1187 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 IMPDH2P12268 514 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 GCFC2P16383 781 aaKnown RBP6.32□□□□□ -1.4
EBF1-211ENST00000622875 MCM3P25205 808 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 WTAPQ15007 396 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 FAM47AQ5JRC9 791 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 MYSM1Q5VVJ2 828 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 PPP4R4Q6NUP7 873 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 MYOCDQ8IZQ8 938 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 CCAR2Q8N163 923 aaKnown RBP6.32□□□□□ -1.4
EBF1-211ENST00000622875 SAMD11Q96NU1 681 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 CCDC113Q9H0I3 377 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 XPNPEP3Q9NQH7 507 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 AKAP2Q9Y2D5 859 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 RRP15Q9Y3B9 282 aaKnown RBP6.32□□□□□ -1.4
EBF1-211ENST00000622875 ZNFX1Q9P2E3 1918 aaKnown RBP6.32□□□□□ -1.4
EBF1-211ENST00000622875 PATJQ8NI35 1801 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 RFX7Q2KHR2 1363 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 TRIM75PA6NK02 468 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 F8W031 263 aaPredicted RBP6.32□□□□□ -1.4
EBF1-211ENST00000622875 FAM200BP0CF97 657 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms