RNA–Protein interactions for RNA: ENST00000621516.1

CYFIP2-223, Transcript of cytoplasmic FMR1 interacting protein 2, human

TSL 5

Gene CYFIP2, Length 915 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CYFIP2-223	ENST00000621516	MICAL3	Q7RTP6	2002 aa		12.83	□□□□□ -0.36
CYFIP2-223	ENST00000621516	ZNF213	O14771	459 aa		12.83	□□□□□ -0.36
CYFIP2-223	ENST00000621516	PPFIA4	O75335	1185 aa		12.83	□□□□□ -0.36
CYFIP2-223	ENST00000621516	NR3C2	P08235	984 aa		12.83	□□□□□ -0.36
CYFIP2-223	ENST00000621516	PARP1	P09874	1014 aa	Known RBP	12.83	□□□□□ -0.36
CYFIP2-223	ENST00000621516	ZNF286B	P0CG31	522 aa		12.83	□□□□□ -0.36
CYFIP2-223	ENST00000621516	GOLGA8H	P0CJ92	632 aa		12.83	□□□□□ -0.36
CYFIP2-223	ENST00000621516	GPNMB	Q14956	572 aa		12.83	□□□□□ -0.36
CYFIP2-223	ENST00000621516	CSPP1	Q1MSJ5	1256 aa		12.83	□□□□□ -0.36
CYFIP2-223	ENST00000621516	TRIM71	Q2Q1W2	868 aa	Known RBP	12.83	□□□□□ -0.36
CYFIP2-223	ENST00000621516	QRICH1	Q2TAL8	776 aa		12.83	□□□□□ -0.36
CYFIP2-223	ENST00000621516	ZNF618	Q5T7W0	954 aa		12.83	□□□□□ -0.36
CYFIP2-223	ENST00000621516	ANKRD45	Q5TZF3	282 aa		12.83	□□□□□ -0.36
CYFIP2-223	ENST00000621516	PTCRA	Q6ISU1	281 aa	Predicted RBP	12.83	□□□□□ -0.36
CYFIP2-223	ENST00000621516	SPRED2	Q7Z698	418 aa		12.83	□□□□□ -0.36
CYFIP2-223	ENST00000621516	ZNF589	Q86UQ0	364 aa	Predicted RBP	12.83	□□□□□ -0.36
CYFIP2-223	ENST00000621516	ADGRF4	Q8IZF3	695 aa		12.83	□□□□□ -0.36
CYFIP2-223	ENST00000621516	MYOCD	Q8IZQ8	938 aa		12.83	□□□□□ -0.36
CYFIP2-223	ENST00000621516	AMN	Q9BXJ7	453 aa		12.83	□□□□□ -0.36
CYFIP2-223	ENST00000621516	UBA5	Q9GZZ9	404 aa		12.83	□□□□□ -0.36
CYFIP2-223	ENST00000621516	C11orf16	Q9NQ32	467 aa		12.83	□□□□□ -0.36
CYFIP2-223	ENST00000621516	PCDHB15	Q9Y5E8	787 aa		12.83	□□□□□ -0.36
CYFIP2-223	ENST00000621516	MYH6	P13533	1939 aa		12.83	□□□□□ -0.36
CYFIP2-223	ENST00000621516	NEDD4	P46934	1319 aa		12.83	□□□□□ -0.36
CYFIP2-223	ENST00000621516	C17orf102	A2RUQ5	167 aa		12.82	□□□□□ -0.36
CYFIP2-223	ENST00000621516	FAM86C2P	A6NEL3	165 aa		12.82	□□□□□ -0.36
CYFIP2-223	ENST00000621516	RSPH10B2	B2RC85	870 aa		12.82	□□□□□ -0.36
CYFIP2-223	ENST00000621516	NCK2	O43639	380 aa		12.82	□□□□□ -0.36
CYFIP2-223	ENST00000621516	CFB	P00751	764 aa		12.82	□□□□□ -0.36
CYFIP2-223	ENST00000621516	RSPH10B	P0C881	870 aa		12.82	□□□□□ -0.36
CYFIP2-223	ENST00000621516	TGFB3	P10600	412 aa		12.82	□□□□□ -0.36
CYFIP2-223	ENST00000621516	HSD17B4	P51659	736 aa		12.82	□□□□□ -0.36
CYFIP2-223	ENST00000621516	HTRA4	P83105	476 aa	Predicted RBP	12.82	□□□□□ -0.36
CYFIP2-223	ENST00000621516	NMI	Q13287	307 aa	Predicted RBP	12.82	□□□□□ -0.36
CYFIP2-223	ENST00000621516	TMCO2	Q7Z6W1	182 aa	Predicted RBP	12.82	□□□□□ -0.36
CYFIP2-223	ENST00000621516	SERINC5	Q86VE9	423 aa		12.82	□□□□□ -0.36
CYFIP2-223	ENST00000621516	SEPT8	Q92599	483 aa		12.82	□□□□□ -0.36
CYFIP2-223	ENST00000621516	ANKS1A	Q92625	1134 aa		12.82	□□□□□ -0.36
CYFIP2-223	ENST00000621516	APBB2	Q92870	758 aa		12.82	□□□□□ -0.36
CYFIP2-223	ENST00000621516	SPATA33	Q96N06	139 aa		12.82	□□□□□ -0.36
CYFIP2-223	ENST00000621516	YME1L1	Q96TA2	773 aa		12.82	□□□□□ -0.36
CYFIP2-223	ENST00000621516	PDCD2L	Q9BRP1	358 aa		12.82	□□□□□ -0.36
CYFIP2-223	ENST00000621516	CNNM2	Q9H8M5	875 aa		12.82	□□□□□ -0.36
CYFIP2-223	ENST00000621516	COL20A1	Q9P218	1284 aa		12.82	□□□□□ -0.36
CYFIP2-223	ENST00000621516	PRKAG3	Q9UGI9	489 aa		12.82	□□□□□ -0.36
CYFIP2-223	ENST00000621516	RWDD3	Q9Y3V2	267 aa		12.82	□□□□□ -0.36
CYFIP2-223	ENST00000621516	TRIM6-TRIM34	B2RNG4	842 aa		12.81	□□□□□ -0.36
CYFIP2-223	ENST00000621516	GNAT1	P11488	350 aa		12.81	□□□□□ -0.36
CYFIP2-223	ENST00000621516	CCND2	P30279	289 aa		12.81	□□□□□ -0.36
CYFIP2-223	ENST00000621516	THPO	P40225	353 aa		12.81	□□□□□ -0.36
CYFIP2-223	ENST00000621516	GNPTAB	Q3T906	1256 aa		12.81	□□□□□ -0.36
CYFIP2-223	ENST00000621516	CELF3	Q5SZQ8	465 aa	Known RBP	12.81	□□□□□ -0.36
CYFIP2-223	ENST00000621516	FAM117B	Q6P1L5	589 aa		12.81	□□□□□ -0.36
CYFIP2-223	ENST00000621516	TRAF7	Q6Q0C0	670 aa		12.81	□□□□□ -0.36
CYFIP2-223	ENST00000621516	NEK9	Q8TD19	979 aa		12.81	□□□□□ -0.36
CYFIP2-223	ENST00000621516	PABPC5	Q96DU9	382 aa	Known RBP	12.81	□□□□□ -0.36
CYFIP2-223	ENST00000621516	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	12.81	□□□□□ -0.36
CYFIP2-223	ENST00000621516	C17orf80	Q9BSJ5	609 aa		12.81	□□□□□ -0.36
CYFIP2-223	ENST00000621516	UBAC1	Q9BSL1	405 aa		12.81	□□□□□ -0.36
CYFIP2-223	ENST00000621516	KRT23	Q9C075	422 aa		12.81	□□□□□ -0.36
CYFIP2-223	ENST00000621516	NSUN3	Q9H649	340 aa	Known RBP	12.81	□□□□□ -0.36
CYFIP2-223	ENST00000621516	RALGAPA2	Q2PPJ7	1873 aa		12.8	□□□□□ -0.36
CYFIP2-223	ENST00000621516	GRXCR2	A6NFK2	248 aa		12.8	□□□□□ -0.36
CYFIP2-223	ENST00000621516		H3BNC9	293 aa		12.8	□□□□□ -0.36
CYFIP2-223	ENST00000621516	HIP1	O00291	1037 aa		12.8	□□□□□ -0.36
CYFIP2-223	ENST00000621516	DCX	O43602	365 aa		12.8	□□□□□ -0.36
CYFIP2-223	ENST00000621516	KDM4A	O75164	1064 aa		12.8	□□□□□ -0.36
CYFIP2-223	ENST00000621516	STAM2	O75886	525 aa		12.8	□□□□□ -0.36
CYFIP2-223	ENST00000621516	GGPS1	O95749	300 aa		12.8	□□□□□ -0.36
CYFIP2-223	ENST00000621516	UBA1	P22314	1058 aa	Known RBP	12.8	□□□□□ -0.36
CYFIP2-223	ENST00000621516	MKRN4P	Q13434	485 aa	Predicted RBP	12.8	□□□□□ -0.36
CYFIP2-223	ENST00000621516	MBTPS1	Q14703	1052 aa		12.8	□□□□□ -0.36
CYFIP2-223	ENST00000621516	IMMT	Q16891	758 aa	Known RBP	12.8	□□□□□ -0.36
CYFIP2-223	ENST00000621516	EPC2	Q52LR7	807 aa		12.8	□□□□□ -0.36
CYFIP2-223	ENST00000621516	PLEKHG4	Q58EX7	1191 aa		12.8	□□□□□ -0.36
CYFIP2-223	ENST00000621516	MYSM1	Q5VVJ2	828 aa		12.8	□□□□□ -0.36
CYFIP2-223	ENST00000621516	BANK1	Q8NDB2	785 aa		12.8	□□□□□ -0.36
CYFIP2-223	ENST00000621516	DBF4B	Q8NFT6	615 aa		12.8	□□□□□ -0.36
CYFIP2-223	ENST00000621516	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	12.8	□□□□□ -0.36
CYFIP2-223	ENST00000621516	KHSRP	Q92945	711 aa	Known RBP eCLIP	12.8	□□□□□ -0.36
CYFIP2-223	ENST00000621516	ATP6V0A1	Q93050	837 aa		12.8	□□□□□ -0.36
CYFIP2-223	ENST00000621516	POP1	Q99575	1024 aa	Known RBP	12.8	□□□□□ -0.36
CYFIP2-223	ENST00000621516	ZKSCAN3	Q9BRR0	538 aa		12.8	□□□□□ -0.36
CYFIP2-223	ENST00000621516	UPF3B	Q9BZI7	483 aa	Known RBP	12.8	□□□□□ -0.36
CYFIP2-223	ENST00000621516	LMAN2L	Q9H0V9	348 aa		12.8	□□□□□ -0.36
CYFIP2-223	ENST00000621516	MLXIP	Q9HAP2	919 aa		12.8	□□□□□ -0.36
CYFIP2-223	ENST00000621516	ZNF215	Q9UL58	517 aa	Predicted RBP	12.8	□□□□□ -0.36
CYFIP2-223	ENST00000621516	NOP56	O00567	594 aa	Known RBP	12.79	□□□□□ -0.36
CYFIP2-223	ENST00000621516	ZBTB5	O15062	677 aa		12.79	□□□□□ -0.36
CYFIP2-223	ENST00000621516	IL9	P15248	144 aa		12.79	□□□□□ -0.36
CYFIP2-223	ENST00000621516	HOXC8	P31273	242 aa		12.79	□□□□□ -0.36
CYFIP2-223	ENST00000621516	HDAC1	Q13547	482 aa	Predicted RBP	12.79	□□□□□ -0.36
CYFIP2-223	ENST00000621516	TCTN1	Q2MV58	587 aa		12.79	□□□□□ -0.36
CYFIP2-223	ENST00000621516	HSDL1	Q3SXM5	330 aa		12.79	□□□□□ -0.36
CYFIP2-223	ENST00000621516	STOX1	Q6ZVD7	989 aa		12.79	□□□□□ -0.36
CYFIP2-223	ENST00000621516	ENAH	Q8N8S7	591 aa	Predicted RBP	12.79	□□□□□ -0.36
CYFIP2-223	ENST00000621516	TBC1D5	Q92609	795 aa		12.79	□□□□□ -0.36
CYFIP2-223	ENST00000621516	RILPL2	Q969X0	211 aa		12.79	□□□□□ -0.36
CYFIP2-223	ENST00000621516	CPVL	Q9H3G5	476 aa		12.79	□□□□□ -0.36
CYFIP2-223	ENST00000621516	JMJD4	Q9H9V9	463 aa		12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms