RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 GHRHRQ02643 423 aa13.31□□□□□ -0.28
CPNE3-210ENST00000621245 GPNMBQ14956 572 aa13.31□□□□□ -0.28
CPNE3-210ENST00000621245 ARHGEF16Q5VV41 709 aa13.31□□□□□ -0.28
CPNE3-210ENST00000621245 NFRKBQ6P4R8 1299 aa13.31□□□□□ -0.28
CPNE3-210ENST00000621245 NSUN6Q8TEA1 469 aaKnown RBP13.31□□□□□ -0.28
CPNE3-210ENST00000621245 PIBF1Q8WXW3 757 aa13.31□□□□□ -0.28
CPNE3-210ENST00000621245 PPM1EQ8WY54 764 aa13.31□□□□□ -0.28
CPNE3-210ENST00000621245 MYL10Q9BUA6 226 aa13.31□□□□□ -0.28
CPNE3-210ENST00000621245 AMNQ9BXJ7 453 aa13.31□□□□□ -0.28
CPNE3-210ENST00000621245 TELO2Q9Y4R8 837 aa13.31□□□□□ -0.28
CPNE3-210ENST00000621245 IFIT3O14879 490 aaKnown RBP13.3□□□□□ -0.28
CPNE3-210ENST00000621245 ZBTB5O15062 677 aa13.3□□□□□ -0.28
CPNE3-210ENST00000621245 GH1P01241 217 aa13.3□□□□□ -0.28
CPNE3-210ENST00000621245 NR3C2P08235 984 aa13.3□□□□□ -0.28
CPNE3-210ENST00000621245 MYCLP12524 364 aaPredicted RBP13.3□□□□□ -0.28
CPNE3-210ENST00000621245 NT5C2P49902 561 aa13.3□□□□□ -0.28
CPNE3-210ENST00000621245 SP2Q02086 613 aa13.3□□□□□ -0.28
CPNE3-210ENST00000621245 TROAPQ12815 778 aa13.3□□□□□ -0.28
CPNE3-210ENST00000621245 STXBP2Q15833 593 aa13.3□□□□□ -0.28
CPNE3-210ENST00000621245 TMCO2Q7Z6W1 182 aaPredicted RBP13.3□□□□□ -0.28
CPNE3-210ENST00000621245 MB21D2Q8IYB1 491 aaPredicted RBP13.3□□□□□ -0.28
CPNE3-210ENST00000621245 IWS1Q96ST2 819 aa13.3□□□□□ -0.28
CPNE3-210ENST00000621245 MPHOSPH6Q99547 160 aaKnown RBP13.3□□□□□ -0.28
CPNE3-210ENST00000621245 PDCD2LQ9BRP1 358 aa13.3□□□□□ -0.28
CPNE3-210ENST00000621245 RIOX1Q9H6W3 641 aa13.3□□□□□ -0.28
CPNE3-210ENST00000621245 RBM8AQ9Y5S9 174 aaKnown RBP13.3□□□□□ -0.28
CPNE3-210ENST00000621245 ATG2AQ2TAZ0 1938 aa13.29□□□□□ -0.28
CPNE3-210ENST00000621245 C5orf42Q9H799 3197 aa13.29□□□□□ -0.28
CPNE3-210ENST00000621245 EPOPA6NHQ4 379 aa13.29□□□□□ -0.28
CPNE3-210ENST00000621245 IQCF3P0C7M6 154 aa13.29□□□□□ -0.28
CPNE3-210ENST00000621245 ZNF200P98182 395 aaPredicted RBP13.29□□□□□ -0.28
CPNE3-210ENST00000621245 PTGISQ16647 500 aa13.29□□□□□ -0.28
CPNE3-210ENST00000621245 MCF2L2Q86YR7 1114 aa13.29□□□□□ -0.28
CPNE3-210ENST00000621245 SEZ6LQ9BYH1 1024 aa13.29□□□□□ -0.28
CPNE3-210ENST00000621245 PCDHA1Q9Y5I3 950 aa13.29□□□□□ -0.28
CPNE3-210ENST00000621245 MRVI1Q9Y6F6 885 aa13.29□□□□□ -0.28
CPNE3-210ENST00000621245 SLC4A7Q9Y6M7 1214 aa13.29□□□□□ -0.28
CPNE3-210ENST00000621245 RFXAPO00287 272 aa13.28□□□□□ -0.28
CPNE3-210ENST00000621245 KPNA6O60684 536 aa13.28□□□□□ -0.28
CPNE3-210ENST00000621245 SUPT20HL2P0C7V6 817 aa13.28□□□□□ -0.28
CPNE3-210ENST00000621245 ATP2A2P16615 1042 aaKnown RBP13.28□□□□□ -0.28
CPNE3-210ENST00000621245 PSEN2P49810 448 aa13.28□□□□□ -0.28
CPNE3-210ENST00000621245 WTAPQ15007 396 aa13.28□□□□□ -0.28
CPNE3-210ENST00000621245 PGM5Q15124 567 aa13.28□□□□□ -0.28
CPNE3-210ENST00000621245 RAB30Q15771 203 aa13.28□□□□□ -0.28
CPNE3-210ENST00000621245 CCDC85BQ15834 202 aaPredicted RBP13.28□□□□□ -0.28
CPNE3-210ENST00000621245 HSDL1Q3SXM5 330 aa13.28□□□□□ -0.28
CPNE3-210ENST00000621245 TMEM67Q5HYA8 995 aa13.28□□□□□ -0.28
CPNE3-210ENST00000621245 TRAF7Q6Q0C0 670 aa13.28□□□□□ -0.28
CPNE3-210ENST00000621245 FCHSD1Q86WN1 690 aa13.28□□□□□ -0.28
CPNE3-210ENST00000621245 RAB11FIP4Q86YS3 637 aa13.28□□□□□ -0.28
CPNE3-210ENST00000621245 IGDCC4Q8TDY8 1250 aa13.28□□□□□ -0.28
CPNE3-210ENST00000621245 MAP4K1Q92918 833 aa13.28□□□□□ -0.28
CPNE3-210ENST00000621245 EMID1Q96A84 441 aaPredicted RBP13.28□□□□□ -0.28
CPNE3-210ENST00000621245 ALG1Q9BT22 464 aa13.28□□□□□ -0.28
CPNE3-210ENST00000621245 CERS4Q9HA82 394 aa13.28□□□□□ -0.28
CPNE3-210ENST00000621245 LY9Q9HBG7 655 aa13.28□□□□□ -0.28
CPNE3-210ENST00000621245 HDAC6Q9UBN7 1215 aa13.28□□□□□ -0.28
CPNE3-210ENST00000621245 MSRAQ9UJ68 235 aa13.28□□□□□ -0.28
CPNE3-210ENST00000621245 BRWD1Q9NSI6 2320 aa13.28□□□□□ -0.28
CPNE3-210ENST00000621245 NCOR1O75376 2440 aa13.28□□□□□ -0.28
CPNE3-210ENST00000621245 LOXHD1Q8IVV2 1947 aa13.27□□□□□ -0.28
CPNE3-210ENST00000621245 KAT6AQ92794 2004 aa13.27□□□□□ -0.28
CPNE3-210ENST00000621245 HAS3O00219 553 aa13.27□□□□□ -0.29
CPNE3-210ENST00000621245 EIF3JO75822 258 aaKnown RBP13.27□□□□□ -0.29
CPNE3-210ENST00000621245 PLEKHA8P1O95397 391 aa13.27□□□□□ -0.29
CPNE3-210ENST00000621245 F2P00734 622 aa13.27□□□□□ -0.29
CPNE3-210ENST00000621245 CA3P07451 260 aa13.27□□□□□ -0.29
CPNE3-210ENST00000621245 RXRAP19793 462 aa13.27□□□□□ -0.29
CPNE3-210ENST00000621245 UBA1P22314 1058 aaKnown RBP13.27□□□□□ -0.29
CPNE3-210ENST00000621245 TIE1P35590 1138 aa13.27□□□□□ -0.29
CPNE3-210ENST00000621245 MRPS9P82933 396 aaKnown RBP13.27□□□□□ -0.29
CPNE3-210ENST00000621245 PTPN11Q06124 597 aaPredicted RBP13.27□□□□□ -0.29
CPNE3-210ENST00000621245 TRDNQ13061 729 aa13.27□□□□□ -0.29
CPNE3-210ENST00000621245 SEMA3FQ13275 785 aa13.27□□□□□ -0.29
CPNE3-210ENST00000621245 MBTPS1Q14703 1052 aa13.27□□□□□ -0.29
CPNE3-210ENST00000621245 TRIM71Q2Q1W2 868 aaKnown RBP13.27□□□□□ -0.29
CPNE3-210ENST00000621245 BRDTQ58F21 947 aaPredicted RBP13.27□□□□□ -0.29
CPNE3-210ENST00000621245 MYSM1Q5VVJ2 828 aa13.27□□□□□ -0.29
CPNE3-210ENST00000621245 PPP2R2DQ66LE6 453 aa13.27□□□□□ -0.29
CPNE3-210ENST00000621245 KRT40Q6A162 431 aa13.27□□□□□ -0.29
CPNE3-210ENST00000621245 RALYLQ86SE5 291 aaKnown RBP13.27□□□□□ -0.29
CPNE3-210ENST00000621245 SESTD1Q86VW0 696 aa13.27□□□□□ -0.29
CPNE3-210ENST00000621245 RPUSD2Q8IZ73 545 aaKnown RBP13.27□□□□□ -0.29
CPNE3-210ENST00000621245 CMTR1Q8N1G2 835 aaKnown RBP13.27□□□□□ -0.29
CPNE3-210ENST00000621245 NCOA7Q8NI08 942 aa13.27□□□□□ -0.29
CPNE3-210ENST00000621245 OSBPL7Q9BZF2 842 aa13.27□□□□□ -0.29
CPNE3-210ENST00000621245 LSG1Q9H089 658 aaKnown RBP13.27□□□□□ -0.29
CPNE3-210ENST00000621245 GTF2IRD1Q9UHL9 959 aa13.27□□□□□ -0.29
CPNE3-210ENST00000621245 FRMPD4Q14CM0 1322 aa13.27□□□□□ -0.29
CPNE3-210ENST00000621245 NLRC5Q86WI3 1866 aa13.27□□□□□ -0.29
CPNE3-210ENST00000621245 LCHNA4D1U4 455 aa13.26□□□□□ -0.29
CPNE3-210ENST00000621245 TTLL13PA6NNM8 815 aa13.26□□□□□ -0.29
CPNE3-210ENST00000621245 B4DLN1 442 aa13.26□□□□□ -0.29
CPNE3-210ENST00000621245 NBNO60934 754 aa13.26□□□□□ -0.29
CPNE3-210ENST00000621245 GGPS1O95749 300 aa13.26□□□□□ -0.29
CPNE3-210ENST00000621245 HOXD8P13378 290 aaPredicted RBP13.26□□□□□ -0.29
CPNE3-210ENST00000621245 IGFBP4P22692 258 aa13.26□□□□□ -0.29
CPNE3-210ENST00000621245 MLLT3P42568 568 aaPredicted RBP13.26□□□□□ -0.29
CPNE3-210ENST00000621245 MRPL12P52815 198 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms