RNA–Protein interactions for RNA: ENST00000620739.4

TP53-226, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-226ENST00000620739 CPXCR1Q8N123 301 aa12.72□□□□□ -0.37
TP53-226ENST00000620739 MAF1Q9H063 256 aa12.72□□□□□ -0.37
TP53-226ENST00000620739 DEF6Q9H4E7 631 aa12.72□□□□□ -0.37
TP53-226ENST00000620739 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.72□□□□□ -0.37
TP53-226ENST00000620739 TPD52L2O43399 206 aaKnown RBP12.71□□□□□ -0.37
TP53-226ENST00000620739 SKILP12757 684 aa12.71□□□□□ -0.37
TP53-226ENST00000620739 PAX3P23760 479 aa12.71□□□□□ -0.37
TP53-226ENST00000620739 ABCD1P33897 745 aa12.71□□□□□ -0.37
TP53-226ENST00000620739 KANK3Q6NY19 840 aa12.71□□□□□ -0.37
TP53-226ENST00000620739 WNK4Q96J92 1243 aa12.71□□□□□ -0.37
TP53-226ENST00000620739 PLSCR2Q9NRY7 297 aa12.71□□□□□ -0.37
TP53-226ENST00000620739 LAD1O00515 517 aa12.71□□□□□ -0.38
TP53-226ENST00000620739 CTNND1O60716 968 aaKnown RBP12.71□□□□□ -0.38
TP53-226ENST00000620739 ARHGAP4P98171 946 aa12.71□□□□□ -0.38
TP53-226ENST00000620739 ARID5BQ14865 1188 aa12.71□□□□□ -0.38
TP53-226ENST00000620739 CCDC144BQ3MJ40 725 aa12.71□□□□□ -0.38
TP53-226ENST00000620739 ELOA2Q8IYF1 753 aaPredicted RBP12.71□□□□□ -0.38
TP53-226ENST00000620739 C17orf53Q8N3J3 647 aaPredicted RBP12.71□□□□□ -0.38
TP53-226ENST00000620739 IGSF22Q8N9C0 903 aa12.71□□□□□ -0.38
TP53-226ENST00000620739 KLHL23Q8NBE8 558 aa12.71□□□□□ -0.38
TP53-226ENST00000620739 EMILIN3Q9NT22 766 aa12.71□□□□□ -0.38
TP53-226ENST00000620739 LRWD1Q9UFC0 647 aa12.71□□□□□ -0.38
TP53-226ENST00000620739 NUB1Q9Y5A7 615 aa12.71□□□□□ -0.38
TP53-226ENST00000620739 FAM86B1E9PN63 330 aa12.7□□□□□ -0.38
TP53-226ENST00000620739 FAM86B2P0C5J1 330 aa12.7□□□□□ -0.38
TP53-226ENST00000620739 PTGS1P23219 599 aa12.7□□□□□ -0.38
TP53-226ENST00000620739 TXLNAP40222 546 aa12.7□□□□□ -0.38
TP53-226ENST00000620739 ECM1Q16610 540 aa12.7□□□□□ -0.38
TP53-226ENST00000620739 PRR16Q569H4 304 aa12.7□□□□□ -0.38
TP53-226ENST00000620739 CCDC186Q7Z3E2 898 aa12.7□□□□□ -0.38
TP53-226ENST00000620739 CHURC1Q8WUH1 139 aa12.7□□□□□ -0.38
TP53-226ENST00000620739 HOMER2Q9NSB8 354 aa12.7□□□□□ -0.38
TP53-226ENST00000620739 CCDC39Q9UFE4 941 aa12.7□□□□□ -0.38
TP53-226ENST00000620739 ZHX2Q9Y6X8 837 aa12.7□□□□□ -0.38
TP53-226ENST00000620739 MARCH6O60337 910 aa12.7□□□□□ -0.38
TP53-226ENST00000620739 ECEL1O95672 775 aa12.7□□□□□ -0.38
TP53-226ENST00000620739 STAT3P40763 770 aa12.7□□□□□ -0.38
TP53-226ENST00000620739 C9orf131Q5VYM1 1079 aa12.7□□□□□ -0.38
TP53-226ENST00000620739 TTC19Q6DKK2 380 aaPredicted RBP12.7□□□□□ -0.38
TP53-226ENST00000620739 PPP4R3AQ6IN85 833 aa12.7□□□□□ -0.38
TP53-226ENST00000620739 KCNK18Q7Z418 384 aa12.7□□□□□ -0.38
TP53-226ENST00000620739 LDHDQ86WU2 507 aa12.7□□□□□ -0.38
TP53-226ENST00000620739 BPIFA3Q9BQP9 254 aa12.7□□□□□ -0.38
TP53-226ENST00000620739 TANGO6Q9C0B7 1094 aa12.7□□□□□ -0.38
TP53-226ENST00000620739 CCSER1Q9C0I3 900 aa12.7□□□□□ -0.38
TP53-226ENST00000620739 IFNKQ9P0W0 207 aa12.7□□□□□ -0.38
TP53-226ENST00000620739 MYL5Q02045 173 aa12.69□□□□□ -0.38
TP53-226ENST00000620739 LRMPQ12912 555 aa12.69□□□□□ -0.38
TP53-226ENST00000620739 NOLC1Q14978 699 aaKnown RBP eCLIP12.69□□□□□ -0.38
TP53-226ENST00000620739 ILDR2Q71H61 639 aa12.69□□□□□ -0.38
TP53-226ENST00000620739 CREBRFQ8IUR6 639 aa12.69□□□□□ -0.38
TP53-226ENST00000620739 PRPF38AQ8NAV1 312 aaKnown RBP12.69□□□□□ -0.38
TP53-226ENST00000620739 CRYGNQ8WXF5 182 aa12.69□□□□□ -0.38
TP53-226ENST00000620739 XPO4Q9C0E2 1151 aaKnown RBP12.69□□□□□ -0.38
TP53-226ENST00000620739 RANBP17Q9H2T7 1088 aaKnown RBP12.69□□□□□ -0.38
TP53-226ENST00000620739 KCNF1Q9H3M0 494 aa12.69□□□□□ -0.38
TP53-226ENST00000620739 SAMSN1Q9NSI8 373 aaKnown RBP12.69□□□□□ -0.38
TP53-226ENST00000620739 PCDHA12Q9UN75 941 aa12.69□□□□□ -0.38
TP53-226ENST00000620739 GDAQ9Y2T3 454 aa12.69□□□□□ -0.38
TP53-226ENST00000620739 SPDYE3A6NKU9 549 aa12.69□□□□□ -0.38
TP53-226ENST00000620739 ADM5C9JUS6 153 aa12.69□□□□□ -0.38
TP53-226ENST00000620739 SMC2O95347 1197 aa12.69□□□□□ -0.38
TP53-226ENST00000620739 PTPRAP18433 802 aa12.69□□□□□ -0.38
TP53-226ENST00000620739 VCAM1P19320 739 aa12.69□□□□□ -0.38
TP53-226ENST00000620739 FILIP1Q7Z7B0 1213 aa12.69□□□□□ -0.38
TP53-226ENST00000620739 HPS3Q969F9 1004 aa12.69□□□□□ -0.38
TP53-226ENST00000620739 RAVER2Q9HCJ3 691 aaKnown RBP12.69□□□□□ -0.38
TP53-226ENST00000620739 DDX41Q9UJV9 622 aaKnown RBP12.69□□□□□ -0.38
TP53-226ENST00000620739 SYNPO2Q9UMS6 1093 aa12.69□□□□□ -0.38
TP53-226ENST00000620739 ZNF232Q9UNY5 417 aa12.69□□□□□ -0.38
TP53-226ENST00000620739 ZNF536O15090 1300 aa12.68□□□□□ -0.38
TP53-226ENST00000620739 MYO1CO00159 1063 aa12.68□□□□□ -0.38
TP53-226ENST00000620739 NFIBO00712 420 aa12.68□□□□□ -0.38
TP53-226ENST00000620739 FLOT1O75955 427 aa12.68□□□□□ -0.38
TP53-226ENST00000620739 HMGCS2P54868 508 aa12.68□□□□□ -0.38
TP53-226ENST00000620739 GRB10Q13322 594 aa12.68□□□□□ -0.38
TP53-226ENST00000620739 SARM1Q6SZW1 724 aa12.68□□□□□ -0.38
TP53-226ENST00000620739 EEF2KMTQ96G04 330 aa12.68□□□□□ -0.38
TP53-226ENST00000620739 PNMA5Q96PV4 448 aa12.68□□□□□ -0.38
TP53-226ENST00000620739 GSDMAQ96QA5 445 aa12.68□□□□□ -0.38
TP53-226ENST00000620739 KIAA1683Q9H0B3 1180 aa12.68□□□□□ -0.38
TP53-226ENST00000620739 SH2D4AQ9H788 454 aa12.68□□□□□ -0.38
TP53-226ENST00000620739 NFE2L3Q9Y4A8 694 aa12.68□□□□□ -0.38
TP53-226ENST00000620739 RPN1P04843 607 aaKnown RBP12.68□□□□□ -0.38
TP53-226ENST00000620739 MAP2K2P36507 400 aa12.68□□□□□ -0.38
TP53-226ENST00000620739 FOXD4Q12950 439 aaPredicted RBP12.68□□□□□ -0.38
TP53-226ENST00000620739 ZNF280DQ6N043 979 aa12.68□□□□□ -0.38
TP53-226ENST00000620739 MLKLQ8NB16 471 aa12.68□□□□□ -0.38
TP53-226ENST00000620739 LENG9Q96B70 501 aa12.68□□□□□ -0.38
TP53-226ENST00000620739 KLRG1Q96E93 195 aa12.68□□□□□ -0.38
TP53-226ENST00000620739 PURBQ96QR8 312 aaKnown RBP12.68□□□□□ -0.38
TP53-226ENST00000620739 RPAP3Q9H6T3 665 aaPredicted RBP12.68□□□□□ -0.38
TP53-226ENST00000620739 FEM1BQ9UK73 627 aa12.68□□□□□ -0.38
TP53-226ENST00000620739 ARIH1Q9Y4X5 557 aaPredicted RBP12.68□□□□□ -0.38
TP53-226ENST00000620739 PPP1R3GB7ZBB8 358 aa12.67□□□□□ -0.38
TP53-226ENST00000620739 IKBKBO14920 756 aa12.67□□□□□ -0.38
TP53-226ENST00000620739 PEX10O60683 326 aa12.67□□□□□ -0.38
TP53-226ENST00000620739 CD151P48509 253 aa12.67□□□□□ -0.38
TP53-226ENST00000620739 FXR2P51116 673 aaKnown RBP eCLIP12.67□□□□□ -0.38
TP53-226ENST00000620739 PARP9Q8IXQ6 854 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms