RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 IL31RAQ8NI17 732 aa13.24□□□□□ -0.29
PDPN-211ENST00000617617 SMCR8Q8TEV9 937 aaPredicted RBP13.24□□□□□ -0.29
PDPN-211ENST00000617617 CDHR1Q96JP9 859 aa13.24□□□□□ -0.29
PDPN-211ENST00000617617 MPHOSPH6Q99547 160 aaKnown RBP13.24□□□□□ -0.29
PDPN-211ENST00000617617 SENP7Q9BQF6 1050 aa13.24□□□□□ -0.29
PDPN-211ENST00000617617 FUCA2Q9BTY2 467 aa13.24□□□□□ -0.29
PDPN-211ENST00000617617 MMTAG2Q9BU76 263 aaKnown RBP13.24□□□□□ -0.29
PDPN-211ENST00000617617 TTC12Q9H892 705 aaPredicted RBP13.24□□□□□ -0.29
PDPN-211ENST00000617617 PCDHA12Q9UN75 941 aa13.24□□□□□ -0.29
PDPN-211ENST00000617617 NFASCO94856 1347 aa13.24□□□□□ -0.29
PDPN-211ENST00000617617 NR3C2P08235 984 aa13.24□□□□□ -0.29
PDPN-211ENST00000617617 ZNF76P36508 570 aa13.24□□□□□ -0.29
PDPN-211ENST00000617617 ALDH5A1P51649 535 aaPredicted RBP13.24□□□□□ -0.29
PDPN-211ENST00000617617 TMEM119Q4V9L6 283 aa13.24□□□□□ -0.29
PDPN-211ENST00000617617 NT5DC1Q5TFE4 455 aa13.24□□□□□ -0.29
PDPN-211ENST00000617617 C17orf99Q6UX52 265 aa13.24□□□□□ -0.29
PDPN-211ENST00000617617 NCAPG2Q86XI2 1143 aa13.24□□□□□ -0.29
PDPN-211ENST00000617617 EPSTI1Q96J88 318 aa13.24□□□□□ -0.29
PDPN-211ENST00000617617 FGD4Q96M96 766 aa13.24□□□□□ -0.29
PDPN-211ENST00000617617 MMP19Q99542 508 aa13.24□□□□□ -0.29
PDPN-211ENST00000617617 PAGR1Q9BTK6 254 aa13.24□□□□□ -0.29
PDPN-211ENST00000617617 WDR11Q9BZH6 1224 aa13.24□□□□□ -0.29
PDPN-211ENST00000617617 AGO4Q9HCK5 861 aaKnown RBP13.24□□□□□ -0.29
PDPN-211ENST00000617617 ASTN1O14525 1302 aa13.24□□□□□ -0.29
PDPN-211ENST00000617617 KDM3AQ9Y4C1 1321 aa13.24□□□□□ -0.29
PDPN-211ENST00000617617 FCER1AP12319 257 aa13.23□□□□□ -0.29
PDPN-211ENST00000617617 YY1P25490 414 aa13.23□□□□□ -0.29
PDPN-211ENST00000617617 NOGQ13253 232 aa13.23□□□□□ -0.29
PDPN-211ENST00000617617 PDXDC2PQ6P474 469 aa13.23□□□□□ -0.29
PDPN-211ENST00000617617 CNNM4Q6P4Q7 775 aa13.23□□□□□ -0.29
PDPN-211ENST00000617617 USP49Q70CQ1 688 aa13.23□□□□□ -0.29
PDPN-211ENST00000617617 ANKRD35Q8N283 1001 aa13.23□□□□□ -0.29
PDPN-211ENST00000617617 IQUBQ8NA54 791 aa13.23□□□□□ -0.29
PDPN-211ENST00000617617 DISC1Q9NRI5 854 aa13.23□□□□□ -0.29
PDPN-211ENST00000617617 CCDC39Q9UFE4 941 aa13.23□□□□□ -0.29
PDPN-211ENST00000617617 HOOK1Q9UJC3 728 aaKnown RBP13.23□□□□□ -0.29
PDPN-211ENST00000617617 A0A087X0B3 334 aa13.23□□□□□ -0.29
PDPN-211ENST00000617617 EIF3JO75822 258 aaKnown RBP13.23□□□□□ -0.29
PDPN-211ENST00000617617 GRB14Q14449 540 aa13.23□□□□□ -0.29
PDPN-211ENST00000617617 LRSAM1Q6UWE0 723 aa13.23□□□□□ -0.29
PDPN-211ENST00000617617 NLRX1Q86UT6 975 aa13.23□□□□□ -0.29
PDPN-211ENST00000617617 MSL3Q8N5Y2 521 aaKnown RBP13.23□□□□□ -0.29
PDPN-211ENST00000617617 RDM1Q8NG50 284 aa13.23□□□□□ -0.29
PDPN-211ENST00000617617 SPATA20Q8TB22 786 aa13.23□□□□□ -0.29
PDPN-211ENST00000617617 CCDC34Q96HJ3 373 aa13.23□□□□□ -0.29
PDPN-211ENST00000617617 POLR3CQ9BUI4 534 aaPredicted RBP13.23□□□□□ -0.29
PDPN-211ENST00000617617 TNMDQ9H2S6 317 aa13.23□□□□□ -0.29
PDPN-211ENST00000617617 TBC1D22BQ9NU19 505 aa13.23□□□□□ -0.29
PDPN-211ENST00000617617 STK17AQ9UEE5 414 aa13.23□□□□□ -0.29
PDPN-211ENST00000617617 ABT1Q9ULW3 272 aaKnown RBP13.23□□□□□ -0.29
PDPN-211ENST00000617617 SOWAHBA6NEL2 793 aa13.22□□□□□ -0.29
PDPN-211ENST00000617617 POTEB2H3BUK9 544 aa13.22□□□□□ -0.29
PDPN-211ENST00000617617 TLR2O60603 784 aa13.22□□□□□ -0.29
PDPN-211ENST00000617617 TECP42680 631 aa13.22□□□□□ -0.29
PDPN-211ENST00000617617 TXKP42681 527 aa13.22□□□□□ -0.29
PDPN-211ENST00000617617 KCTD2Q14681 263 aa13.22□□□□□ -0.29
PDPN-211ENST00000617617 ZNF792Q3KQV3 632 aa13.22□□□□□ -0.29
PDPN-211ENST00000617617 OTOP1Q7RTM1 612 aa13.22□□□□□ -0.29
PDPN-211ENST00000617617 NEK9Q8TD19 979 aa13.22□□□□□ -0.29
PDPN-211ENST00000617617 LRWD1Q9UFC0 647 aa13.22□□□□□ -0.29
PDPN-211ENST00000617617 TUBE1Q9UJT0 475 aa13.22□□□□□ -0.29
PDPN-211ENST00000617617 SPATA31C2B4DYI2 1134 aa13.22□□□□□ -0.29
PDPN-211ENST00000617617 DHX15O43143 795 aaKnown RBP13.22□□□□□ -0.29
PDPN-211ENST00000617617 LONRF3Q496Y0 759 aa13.22□□□□□ -0.29
PDPN-211ENST00000617617 CABP7Q86V35 215 aa13.22□□□□□ -0.29
PDPN-211ENST00000617617 CYP2W1Q8TAV3 490 aa13.22□□□□□ -0.29
PDPN-211ENST00000617617 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.22□□□□□ -0.29
PDPN-211ENST00000617617 MYH9P35579 1960 aaKnown RBP13.22□□□□□ -0.29
PDPN-211ENST00000617617 SLC15A5A6NIM6 579 aa13.21□□□□□ -0.29
PDPN-211ENST00000617617 POLR2DO15514 142 aaKnown RBP13.21□□□□□ -0.29
PDPN-211ENST00000617617 EIF2AK2P19525 551 aaKnown RBP13.21□□□□□ -0.29
PDPN-211ENST00000617617 UBA7P41226 1012 aa13.21□□□□□ -0.29
PDPN-211ENST00000617617 MKRN3Q13064 507 aaKnown RBP13.21□□□□□ -0.29
PDPN-211ENST00000617617 ANKRD13CQ8N6S4 541 aa13.21□□□□□ -0.29
PDPN-211ENST00000617617 NT5C3AQ9H0P0 336 aa13.21□□□□□ -0.29
PDPN-211ENST00000617617 ZFYVE28Q9HCC9 887 aa13.21□□□□□ -0.29
PDPN-211ENST00000617617 TUFT1Q9NNX1 390 aa13.21□□□□□ -0.29
PDPN-211ENST00000617617 KCNH7Q9NS40 1196 aa13.21□□□□□ -0.29
PDPN-211ENST00000617617 CA12O43570 354 aa13.21□□□□□ -0.29
PDPN-211ENST00000617617 ARP10275 920 aa13.21□□□□□ -0.29
PDPN-211ENST00000617617 MTMR1Q13613 665 aa13.21□□□□□ -0.29
PDPN-211ENST00000617617 STXBP2Q15833 593 aa13.21□□□□□ -0.29
PDPN-211ENST00000617617 HAUS3Q68CZ6 603 aa13.21□□□□□ -0.29
PDPN-211ENST00000617617 KCNV1Q6PIU1 500 aa13.21□□□□□ -0.29
PDPN-211ENST00000617617 MAMDC4Q6UXC1 1216 aa13.21□□□□□ -0.29
PDPN-211ENST00000617617 ERMNQ8TAM6 284 aa13.21□□□□□ -0.29
PDPN-211ENST00000617617 ZNF577Q9BSK1 485 aa13.21□□□□□ -0.29
PDPN-211ENST00000617617 TEKT3Q9BXF9 490 aa13.21□□□□□ -0.29
PDPN-211ENST00000617617 PORCNQ9H237 461 aa13.21□□□□□ -0.29
PDPN-211ENST00000617617 KBTBD4Q9NVX7 518 aa13.21□□□□□ -0.29
PDPN-211ENST00000617617 RGS20O76081 388 aa13.21□□□□□ -0.3
PDPN-211ENST00000617617 CAVIN2O95810 425 aa13.21□□□□□ -0.3
PDPN-211ENST00000617617 RPA1P27694 616 aa13.21□□□□□ -0.3
PDPN-211ENST00000617617 SARSP49591 514 aaKnown RBP13.21□□□□□ -0.3
PDPN-211ENST00000617617 GNPTABQ3T906 1256 aa13.21□□□□□ -0.3
PDPN-211ENST00000617617 NAALADL2Q58DX5 795 aa13.21□□□□□ -0.3
PDPN-211ENST00000617617 KRT79Q5XKE5 535 aa13.21□□□□□ -0.3
PDPN-211ENST00000617617 CALML4Q96GE6 196 aa13.21□□□□□ -0.3
PDPN-211ENST00000617617 FSD2A1L4K1 749 aa13.2□□□□□ -0.3
PDPN-211ENST00000617617 ASB14A6NK59 587 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms