RNA–Protein interactions for RNA: ENST00000615065.1

PRKN-211, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-211ENST00000615065 SPATA33Q96N06 139 aa17.13■□□□□ 0.33
PRKN-211ENST00000615065 ALG1Q9BT22 464 aa17.13■□□□□ 0.33
PRKN-211ENST00000615065 PRDM12Q9H4Q4 367 aa17.13■□□□□ 0.33
PRKN-211ENST00000615065 HDAC6Q9UBN7 1215 aa17.13■□□□□ 0.33
PRKN-211ENST00000615065 GTF2IRD1Q9UHL9 959 aa17.13■□□□□ 0.33
PRKN-211ENST00000615065 FRMPD4Q14CM0 1322 aa17.13■□□□□ 0.33
PRKN-211ENST00000615065 CCDC69A6NI79 296 aa17.12■□□□□ 0.33
PRKN-211ENST00000615065 HAS3O00219 553 aa17.12■□□□□ 0.33
PRKN-211ENST00000615065 ATP2A2P16615 1042 aaKnown RBP17.12■□□□□ 0.33
PRKN-211ENST00000615065 MRPS9P82933 396 aaKnown RBP17.12■□□□□ 0.33
PRKN-211ENST00000615065 KIAA0753Q2KHM9 967 aa17.12■□□□□ 0.33
PRKN-211ENST00000615065 HSDL1Q3SXM5 330 aa17.12■□□□□ 0.33
PRKN-211ENST00000615065 BMP2KLQ5H9B9 411 aa17.12■□□□□ 0.33
PRKN-211ENST00000615065 RAB11FIP4Q86YS3 637 aa17.12■□□□□ 0.33
PRKN-211ENST00000615065 CMTR1Q8N1G2 835 aaKnown RBP17.12■□□□□ 0.33
PRKN-211ENST00000615065 SRBD1Q8N5C6 995 aaKnown RBP17.12■□□□□ 0.33
PRKN-211ENST00000615065 C7orf31Q8N865 590 aa17.12■□□□□ 0.33
PRKN-211ENST00000615065 USP38Q8NB14 1042 aa17.12■□□□□ 0.33
PRKN-211ENST00000615065 CAGE1Q8TC20 777 aa17.12■□□□□ 0.33
PRKN-211ENST00000615065 RRP36Q96EU6 259 aaKnown RBP17.12■□□□□ 0.33
PRKN-211ENST00000615065 KATNAL1Q9BW62 490 aa17.12■□□□□ 0.33
PRKN-211ENST00000615065 LRRC2Q9BYS8 371 aa17.12■□□□□ 0.33
PRKN-211ENST00000615065 CUL9Q8IWT3 2517 aa17.12■□□□□ 0.33
PRKN-211ENST00000615065 CHD7Q9P2D1 2997 aa17.12■□□□□ 0.33
PRKN-211ENST00000615065 TGFB3P10600 412 aa17.11■□□□□ 0.33
PRKN-211ENST00000615065 ACTN1P12814 892 aa17.11■□□□□ 0.33
PRKN-211ENST00000615065 USP17L6PQ6QN14 398 aa17.11■□□□□ 0.33
PRKN-211ENST00000615065 CENPQQ7L2Z9 268 aaPredicted RBP17.11■□□□□ 0.33
PRKN-211ENST00000615065 TMTC2Q8N394 836 aa17.11■□□□□ 0.33
PRKN-211ENST00000615065 CCDC155Q8N6L0 562 aa17.11■□□□□ 0.33
PRKN-211ENST00000615065 AFAP1L1Q8TED9 768 aa17.11■□□□□ 0.33
PRKN-211ENST00000615065 GAS2L1Q99501 681 aaPredicted RBP17.11■□□□□ 0.33
PRKN-211ENST00000615065 LZTS2Q9BRK4 669 aa17.11■□□□□ 0.33
PRKN-211ENST00000615065 COL25A1Q9BXS0 654 aaPredicted RBP17.11■□□□□ 0.33
PRKN-211ENST00000615065 FTOQ9C0B1 505 aaKnown RBP eCLIP17.11■□□□□ 0.33
PRKN-211ENST00000615065 BCAS3Q9H6U6 928 aa17.11■□□□□ 0.33
PRKN-211ENST00000615065 SLC28A3Q9HAS3 691 aa17.11■□□□□ 0.33
PRKN-211ENST00000615065 SEC63Q9UGP8 760 aaKnown RBP17.11■□□□□ 0.33
PRKN-211ENST00000615065 RBAK-RBAKDNI3L0D1 243 aa17.1■□□□□ 0.33
PRKN-211ENST00000615065 PPFIA4O75335 1185 aa17.1■□□□□ 0.33
PRKN-211ENST00000615065 SMARCA1P28370 1054 aa17.1■□□□□ 0.33
PRKN-211ENST00000615065 LIFRP42702 1097 aa17.1■□□□□ 0.33
PRKN-211ENST00000615065 GNAQP50148 359 aa17.1■□□□□ 0.33
PRKN-211ENST00000615065 ZNF200P98182 395 aaPredicted RBP17.1■□□□□ 0.33
PRKN-211ENST00000615065 INPP4AQ96PE3 977 aaPredicted RBP17.1■□□□□ 0.33
PRKN-211ENST00000615065 MLXIPQ9HAP2 919 aa17.1■□□□□ 0.33
PRKN-211ENST00000615065 PCDHA11Q9Y5I1 949 aa17.1■□□□□ 0.33
PRKN-211ENST00000615065 MEIS2O14770 477 aa17.09■□□□□ 0.33
PRKN-211ENST00000615065 CKBP12277 381 aa17.09■□□□□ 0.33
PRKN-211ENST00000615065 SELPP16109 830 aa17.09■□□□□ 0.33
PRKN-211ENST00000615065 RBL2Q08999 1139 aa17.09■□□□□ 0.33
PRKN-211ENST00000615065 SEMA3FQ13275 785 aa17.09■□□□□ 0.33
PRKN-211ENST00000615065 ADGRE1Q14246 886 aa17.09■□□□□ 0.33
PRKN-211ENST00000615065 HIC1Q14526 733 aa17.09■□□□□ 0.33
PRKN-211ENST00000615065 GPNMBQ14956 572 aa17.09■□□□□ 0.33
PRKN-211ENST00000615065 GNPTABQ3T906 1256 aa17.09■□□□□ 0.33
PRKN-211ENST00000615065 PPP2R2DQ66LE6 453 aa17.09■□□□□ 0.33
PRKN-211ENST00000615065 LRRC8DQ7L1W4 858 aa17.09■□□□□ 0.33
PRKN-211ENST00000615065 SMARCC2Q8TAQ2 1214 aa17.09■□□□□ 0.33
PRKN-211ENST00000615065 CUL5Q93034 780 aa17.09■□□□□ 0.33
PRKN-211ENST00000615065 WNT8BQ93098 351 aa17.09■□□□□ 0.33
PRKN-211ENST00000615065 C16orf70Q9BSU1 422 aa17.09■□□□□ 0.33
PRKN-211ENST00000615065 RTEL1Q9NZ71 1219 aa17.09■□□□□ 0.33
PRKN-211ENST00000615065 hCG_1642624A0A1W2PR95 340 aa17.08■□□□□ 0.32
PRKN-211ENST00000615065 PIK3CDO00329 1044 aa17.08■□□□□ 0.32
PRKN-211ENST00000615065 STAM2O75886 525 aa17.08■□□□□ 0.32
PRKN-211ENST00000615065 CALM1P0DP23 149 aa17.08■□□□□ 0.32
PRKN-211ENST00000615065 CALM2P0DP24 149 aa17.08■□□□□ 0.32
PRKN-211ENST00000615065 CALM3P0DP25 149 aa17.08■□□□□ 0.32
PRKN-211ENST00000615065 ICAM3P32942 547 aa17.08■□□□□ 0.32
PRKN-211ENST00000615065 MICU3Q86XE3 530 aa17.08■□□□□ 0.32
PRKN-211ENST00000615065 SLC9A7Q96T83 725 aa17.08■□□□□ 0.32
PRKN-211ENST00000615065 SLC12A7Q9Y666 1083 aa17.08■□□□□ 0.32
PRKN-211ENST00000615065 SPATA31C2B4DYI2 1134 aa17.07■□□□□ 0.32
PRKN-211ENST00000615065 NBNO60934 754 aa17.07■□□□□ 0.32
PRKN-211ENST00000615065 LGALS2P05162 132 aa17.07■□□□□ 0.32
PRKN-211ENST00000615065 CA3P07451 260 aa17.07■□□□□ 0.32
PRKN-211ENST00000615065 PTK7Q13308 1070 aa17.07■□□□□ 0.32
PRKN-211ENST00000615065 TRIM71Q2Q1W2 868 aaKnown RBP17.07■□□□□ 0.32
PRKN-211ENST00000615065 PCNX4Q63HM2 1172 aa17.07■□□□□ 0.32
PRKN-211ENST00000615065 TMTC3Q6ZXV5 915 aa17.07■□□□□ 0.32
PRKN-211ENST00000615065 CYFIP1Q7L576 1253 aa17.07■□□□□ 0.32
PRKN-211ENST00000615065 SGMS1Q86VZ5 419 aa17.07■□□□□ 0.32
PRKN-211ENST00000615065 CCDC82Q8N4S0 544 aa17.07■□□□□ 0.32
PRKN-211ENST00000615065 PPM1EQ8WY54 764 aa17.07■□□□□ 0.32
PRKN-211ENST00000615065 TELO2Q9Y4R8 837 aa17.07■□□□□ 0.32
PRKN-211ENST00000615065 VCANP13611 3396 aa17.07■□□□□ 0.32
PRKN-211ENST00000615065 NOP56O00567 594 aaKnown RBP17.06■□□□□ 0.32
PRKN-211ENST00000615065 FIBPO43427 364 aa17.06■□□□□ 0.32
PRKN-211ENST00000615065 BAIAP3O94812 1187 aa17.06■□□□□ 0.32
PRKN-211ENST00000615065 IGFBP4P22692 258 aa17.06■□□□□ 0.32
PRKN-211ENST00000615065 NEDD9Q14511 834 aa17.06■□□□□ 0.32
PRKN-211ENST00000615065 TCTN1Q2MV58 587 aa17.06■□□□□ 0.32
PRKN-211ENST00000615065 ZNF618Q5T7W0 954 aa17.06■□□□□ 0.32
PRKN-211ENST00000615065 RNF20Q5VTR2 975 aa17.06■□□□□ 0.32
PRKN-211ENST00000615065 TRAF7Q6Q0C0 670 aa17.06■□□□□ 0.32
PRKN-211ENST00000615065 METTL7BQ6UX53 244 aa17.06■□□□□ 0.32
PRKN-211ENST00000615065 HERC6Q8IVU3 1022 aa17.06■□□□□ 0.32
PRKN-211ENST00000615065 FANCBQ8NB91 859 aa17.06■□□□□ 0.32
PRKN-211ENST00000615065 PHOSPHO2Q8TCD6 241 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms