RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 CYP2C19P33261 490 aa9.13□□□□□ -0.95
PCDH9-205ENST00000614931 COPB2P35606 906 aa9.13□□□□□ -0.95
PCDH9-205ENST00000614931 MRPS9P82933 396 aaKnown RBP9.13□□□□□ -0.95
PCDH9-205ENST00000614931 ATP2C1P98194 919 aaPredicted RBP9.13□□□□□ -0.95
PCDH9-205ENST00000614931 SLC39A14Q15043 492 aa9.13□□□□□ -0.95
PCDH9-205ENST00000614931 PGM5Q15124 567 aa9.13□□□□□ -0.95
PCDH9-205ENST00000614931 STK38Q15208 465 aa9.13□□□□□ -0.95
PCDH9-205ENST00000614931 IL17AQ16552 155 aa9.13□□□□□ -0.95
PCDH9-205ENST00000614931 AXDND1Q5T1B0 1012 aaPredicted RBP9.13□□□□□ -0.95
PCDH9-205ENST00000614931 ATL3Q6DD88 541 aa9.13□□□□□ -0.95
PCDH9-205ENST00000614931 TEX2Q8IWB9 1127 aa9.13□□□□□ -0.95
PCDH9-205ENST00000614931 FAM133AQ8N9E0 248 aa9.13□□□□□ -0.95
PCDH9-205ENST00000614931 TRPV1Q8NER1 839 aa9.13□□□□□ -0.95
PCDH9-205ENST00000614931 CYP2W1Q8TAV3 490 aa9.13□□□□□ -0.95
PCDH9-205ENST00000614931 LENG9Q96B70 501 aa9.13□□□□□ -0.95
PCDH9-205ENST00000614931 MAML3Q96JK9 1138 aa9.13□□□□□ -0.95
PCDH9-205ENST00000614931 SPATA32Q96LK8 384 aa9.13□□□□□ -0.95
PCDH9-205ENST00000614931 CLIC6Q96NY7 704 aa9.13□□□□□ -0.95
PCDH9-205ENST00000614931 UIMC1Q96RL1 719 aa9.13□□□□□ -0.95
PCDH9-205ENST00000614931 MMP19Q99542 508 aa9.13□□□□□ -0.95
PCDH9-205ENST00000614931 PDCD2LQ9BRP1 358 aa9.13□□□□□ -0.95
PCDH9-205ENST00000614931 C11orf49Q9H6J7 331 aa9.13□□□□□ -0.95
PCDH9-205ENST00000614931 FBXO40Q9UH90 709 aa9.13□□□□□ -0.95
PCDH9-205ENST00000614931 FBXO2Q9UK22 296 aaPredicted RBP9.13□□□□□ -0.95
PCDH9-205ENST00000614931 COLQQ9Y215 455 aaPredicted RBP9.13□□□□□ -0.95
PCDH9-205ENST00000614931 DIS3Q9Y2L1 958 aaKnown RBP9.13□□□□□ -0.95
PCDH9-205ENST00000614931 PFASO15067 1338 aa9.12□□□□□ -0.95
PCDH9-205ENST00000614931 ELP1O95163 1332 aa9.12□□□□□ -0.95
PCDH9-205ENST00000614931 CYP3A7-CYP3A51PA0A087WV96 503 aa9.12□□□□□ -0.95
PCDH9-205ENST00000614931 FAM86B1E9PN63 330 aa9.12□□□□□ -0.95
PCDH9-205ENST00000614931 SPTLC2O15270 562 aa9.12□□□□□ -0.95
PCDH9-205ENST00000614931 EVI5O60447 810 aa9.12□□□□□ -0.95
PCDH9-205ENST00000614931 CCNT1O60563 726 aaKnown RBP9.12□□□□□ -0.95
PCDH9-205ENST00000614931 MSCO60682 206 aa9.12□□□□□ -0.95
PCDH9-205ENST00000614931 PRPF40AO75400 957 aaKnown RBP9.12□□□□□ -0.95
PCDH9-205ENST00000614931 FAM86B2P0C5J1 330 aa9.12□□□□□ -0.95
PCDH9-205ENST00000614931 CYP3A7P24462 503 aa9.12□□□□□ -0.95
PCDH9-205ENST00000614931 CIITAP33076 1130 aa9.12□□□□□ -0.95
PCDH9-205ENST00000614931 ALDH5A1P51649 535 aaPredicted RBP9.12□□□□□ -0.95
PCDH9-205ENST00000614931 PTGDRQ13258 359 aa9.12□□□□□ -0.95
PCDH9-205ENST00000614931 ZNF792Q3KQV3 632 aa9.12□□□□□ -0.95
PCDH9-205ENST00000614931 TPRNQ4KMQ1 711 aa9.12□□□□□ -0.95
PCDH9-205ENST00000614931 MCTP2Q6DN12 878 aa9.12□□□□□ -0.95
PCDH9-205ENST00000614931 ANKRD35Q8N283 1001 aa9.12□□□□□ -0.95
PCDH9-205ENST00000614931 GJA10Q969M2 543 aa9.12□□□□□ -0.95
PCDH9-205ENST00000614931 RMDN3Q96TC7 470 aa9.12□□□□□ -0.95
PCDH9-205ENST00000614931 SCAND2PQ9GZW5 306 aaPredicted RBP9.12□□□□□ -0.95
PCDH9-205ENST00000614931 MAP3K20Q9NYL2 800 aaKnown RBP9.12□□□□□ -0.95
PCDH9-205ENST00000614931 DDX20Q9UHI6 824 aaKnown RBP9.12□□□□□ -0.95
PCDH9-205ENST00000614931 CFAP45Q9UL16 551 aa9.12□□□□□ -0.95
PCDH9-205ENST00000614931 PCDHA7Q9UN72 937 aa9.12□□□□□ -0.95
PCDH9-205ENST00000614931 MORC2Q9Y6X9 1032 aaPredicted RBP9.12□□□□□ -0.95
PCDH9-205ENST00000614931 POTEB2H3BUK9 544 aa9.11□□□□□ -0.95
PCDH9-205ENST00000614931 NEMFO60524 1076 aa9.11□□□□□ -0.95
PCDH9-205ENST00000614931 CNGA1P29973 690 aa9.11□□□□□ -0.95
PCDH9-205ENST00000614931 USP11P51784 963 aa9.11□□□□□ -0.95
PCDH9-205ENST00000614931 SEMA3FQ13275 785 aa9.11□□□□□ -0.95
PCDH9-205ENST00000614931 KCTD2Q14681 263 aa9.11□□□□□ -0.95
PCDH9-205ENST00000614931 PPP4R3AQ6IN85 833 aa9.11□□□□□ -0.95
PCDH9-205ENST00000614931 MOXD1Q6UVY6 613 aa9.11□□□□□ -0.95
PCDH9-205ENST00000614931 ETNPPLQ8TBG4 499 aa9.11□□□□□ -0.95
PCDH9-205ENST00000614931 GPT2Q8TD30 523 aa9.11□□□□□ -0.95
PCDH9-205ENST00000614931 HAS1Q92839 578 aa9.11□□□□□ -0.95
PCDH9-205ENST00000614931 MTMR9Q96QG7 549 aa9.11□□□□□ -0.95
PCDH9-205ENST00000614931 MAF1Q9H063 256 aa9.11□□□□□ -0.95
PCDH9-205ENST00000614931 PRO3102Q9H379 93 aa9.11□□□□□ -0.95
PCDH9-205ENST00000614931 GOLPH3LQ9H4A5 285 aa9.11□□□□□ -0.95
PCDH9-205ENST00000614931 EHMT1Q9H9B1 1298 aa9.11□□□□□ -0.95
PCDH9-205ENST00000614931 KCNMB3Q9NPA1 279 aa9.11□□□□□ -0.95
PCDH9-205ENST00000614931 DDX25Q9UHL0 483 aaKnown RBP9.11□□□□□ -0.95
PCDH9-205ENST00000614931 NRBP1Q9UHY1 535 aa9.11□□□□□ -0.95
PCDH9-205ENST00000614931 UBIAD1Q9Y5Z9 338 aa9.11□□□□□ -0.95
PCDH9-205ENST00000614931 SEPT4O43236 478 aa9.1□□□□□ -0.95
PCDH9-205ENST00000614931 PPP6R2O75170 966 aa9.1□□□□□ -0.95
PCDH9-205ENST00000614931 RGS20O76081 388 aa9.1□□□□□ -0.95
PCDH9-205ENST00000614931 NR3C2P08235 984 aa9.1□□□□□ -0.95
PCDH9-205ENST00000614931 OR52Z1P0C646 297 aa9.1□□□□□ -0.95
PCDH9-205ENST00000614931 ARP10275 920 aa9.1□□□□□ -0.95
PCDH9-205ENST00000614931 MYCLP12524 364 aaPredicted RBP9.1□□□□□ -0.95
PCDH9-205ENST00000614931 GCFC2P16383 781 aaKnown RBP9.1□□□□□ -0.95
PCDH9-205ENST00000614931 ITGB5P18084 799 aa9.1□□□□□ -0.95
PCDH9-205ENST00000614931 LIG1P18858 919 aa9.1□□□□□ -0.95
PCDH9-205ENST00000614931 EDNRBP24530 442 aa9.1□□□□□ -0.95
PCDH9-205ENST00000614931 ORC2Q13416 577 aaPredicted RBP9.1□□□□□ -0.95
PCDH9-205ENST00000614931 Q4G0T1 1027 aa9.1□□□□□ -0.95
PCDH9-205ENST00000614931 PRR16Q569H4 304 aa9.1□□□□□ -0.95
PCDH9-205ENST00000614931 PRAMEF19Q5SWL8 479 aa9.1□□□□□ -0.95
PCDH9-205ENST00000614931 ARHGEF16Q5VV41 709 aa9.1□□□□□ -0.95
PCDH9-205ENST00000614931 PCNX4Q63HM2 1172 aa9.1□□□□□ -0.95
PCDH9-205ENST00000614931 SHC4Q6S5L8 630 aa9.1□□□□□ -0.95
PCDH9-205ENST00000614931 CHRDL2Q6WN34 429 aa9.1□□□□□ -0.95
PCDH9-205ENST00000614931 USP49Q70CQ1 688 aa9.1□□□□□ -0.95
PCDH9-205ENST00000614931 DNERQ8NFT8 737 aa9.1□□□□□ -0.95
PCDH9-205ENST00000614931 KCNG4Q8TDN1 519 aa9.1□□□□□ -0.95
PCDH9-205ENST00000614931 NSUN6Q8TEA1 469 aaKnown RBP9.1□□□□□ -0.95
PCDH9-205ENST00000614931 MXRA8Q9BRK3 442 aa9.1□□□□□ -0.95
PCDH9-205ENST00000614931 TINF2Q9BSI4 451 aa9.1□□□□□ -0.95
PCDH9-205ENST00000614931 MYH9P35579 1960 aaKnown RBP9.1□□□□□ -0.95
PCDH9-205ENST00000614931 VWA3AA6NCI4 1184 aa9.09□□□□□ -0.95
PCDH9-205ENST00000614931 DDX11L8A8MPP1 907 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms