RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 MCTP2Q6DN12 878 aa11.11□□□□□ -0.63
GGA3-221ENST00000614198 NUDT12Q9BQG2 462 aa11.11□□□□□ -0.63
GGA3-221ENST00000614198 GOPCQ9HD26 462 aa11.11□□□□□ -0.63
GGA3-221ENST00000614198 ADARB2Q9NS39 739 aaKnown RBP11.11□□□□□ -0.63
GGA3-221ENST00000614198 RIPK3Q9Y572 518 aa11.11□□□□□ -0.63
GGA3-221ENST00000614198 COL2A1P02458 1487 aaPredicted RBP11.11□□□□□ -0.63
GGA3-221ENST00000614198 NFIBO00712 420 aa11.11□□□□□ -0.63
GGA3-221ENST00000614198 CUTAO60888 179 aa11.11□□□□□ -0.63
GGA3-221ENST00000614198 PHACTR2O75167 634 aa11.11□□□□□ -0.63
GGA3-221ENST00000614198 BMP6P22004 513 aa11.11□□□□□ -0.63
GGA3-221ENST00000614198 EPHX2P34913 555 aa11.11□□□□□ -0.63
GGA3-221ENST00000614198 FOXR1Q6PIV2 292 aa11.11□□□□□ -0.63
GGA3-221ENST00000614198 SMYD4Q8IYR2 804 aaPredicted RBP11.11□□□□□ -0.63
GGA3-221ENST00000614198 RPAP3Q9H6T3 665 aaPredicted RBP11.11□□□□□ -0.63
GGA3-221ENST00000614198 BCCIPQ9P287 314 aaKnown RBP eCLIP11.11□□□□□ -0.63
GGA3-221ENST00000614198 CTNND1O60716 968 aaKnown RBP11.1□□□□□ -0.63
GGA3-221ENST00000614198 GNA11P29992 359 aa11.1□□□□□ -0.63
GGA3-221ENST00000614198 MMS22LQ6ZRQ5 1243 aa11.1□□□□□ -0.63
GGA3-221ENST00000614198 CNNM3Q8NE01 707 aa11.1□□□□□ -0.63
GGA3-221ENST00000614198 CEP89Q96ST8 783 aa11.1□□□□□ -0.63
GGA3-221ENST00000614198 MTRQ99707 1265 aa11.1□□□□□ -0.63
GGA3-221ENST00000614198 BPIFA3Q9BQP9 254 aa11.1□□□□□ -0.63
GGA3-221ENST00000614198 ELP3Q9H9T3 547 aa11.1□□□□□ -0.63
GGA3-221ENST00000614198 RIC8AQ9NPQ8 531 aa11.1□□□□□ -0.63
GGA3-221ENST00000614198 VPS18Q9P253 973 aa11.1□□□□□ -0.63
GGA3-221ENST00000614198 PPP2R3AQ06190 1150 aa11.1□□□□□ -0.63
GGA3-221ENST00000614198 TTLL12Q14166 644 aaPredicted RBP11.1□□□□□ -0.63
GGA3-221ENST00000614198 TREML2Q5T2D2 321 aa11.1□□□□□ -0.63
GGA3-221ENST00000614198 NEK8Q86SG6 692 aa11.1□□□□□ -0.63
GGA3-221ENST00000614198 DCPSQ96C86 337 aaKnown RBP11.1□□□□□ -0.63
GGA3-221ENST00000614198 POLD4Q9HCU8 107 aa11.1□□□□□ -0.63
GGA3-221ENST00000614198 CLEC11AQ9Y240 323 aa11.1□□□□□ -0.63
GGA3-221ENST00000614198 ZNF536O15090 1300 aa11.1□□□□□ -0.63
GGA3-221ENST00000614198 STAT3P40763 770 aa11.1□□□□□ -0.63
GGA3-221ENST00000614198 CLK2P49760 499 aaKnown RBP11.1□□□□□ -0.63
GGA3-221ENST00000614198 POTEEQ6S8J3 1075 aa11.1□□□□□ -0.63
GGA3-221ENST00000614198 SULF1Q8IWU6 871 aa11.1□□□□□ -0.63
GGA3-221ENST00000614198 HNRNPLLQ8WVV9 542 aaKnown RBP11.1□□□□□ -0.63
GGA3-221ENST00000614198 CUL5Q93034 780 aa11.1□□□□□ -0.63
GGA3-221ENST00000614198 ATG4CQ96DT6 458 aa11.1□□□□□ -0.63
GGA3-221ENST00000614198 AMNQ9BXJ7 453 aa11.1□□□□□ -0.63
GGA3-221ENST00000614198 TXLNAP40222 546 aa11.09□□□□□ -0.63
GGA3-221ENST00000614198 DPY19L2Q6NUT2 758 aa11.09□□□□□ -0.63
GGA3-221ENST00000614198 EFCAB13Q8IY85 973 aa11.09□□□□□ -0.63
GGA3-221ENST00000614198 SCYL3Q8IZE3 742 aa11.09□□□□□ -0.63
GGA3-221ENST00000614198 DAGLBQ8NCG7 672 aa11.09□□□□□ -0.63
GGA3-221ENST00000614198 OTUD5Q96G74 571 aa11.09□□□□□ -0.63
GGA3-221ENST00000614198 CXorf56Q9H5V9 222 aa11.09□□□□□ -0.63
GGA3-221ENST00000614198 PKD2L1Q9P0L9 805 aa11.09□□□□□ -0.63
GGA3-221ENST00000614198 PCDHA5Q9Y5H7 936 aa11.09□□□□□ -0.63
GGA3-221ENST00000614198 MRFAP1Q9Y605 127 aa11.09□□□□□ -0.63
GGA3-221ENST00000614198 ZSCAN12O43309 604 aa11.09□□□□□ -0.63
GGA3-221ENST00000614198 DNAJC21Q5F1R6 531 aaKnown RBP11.09□□□□□ -0.63
GGA3-221ENST00000614198 LDHDQ86WU2 507 aa11.09□□□□□ -0.63
GGA3-221ENST00000614198 APOBEC3FQ8IUX4 373 aaKnown RBP11.09□□□□□ -0.63
GGA3-221ENST00000614198 JMYQ8N9B5 988 aa11.09□□□□□ -0.63
GGA3-221ENST00000614198 GOLGA1Q92805 767 aa11.09□□□□□ -0.63
GGA3-221ENST00000614198 PICK1Q9NRD5 415 aa11.09□□□□□ -0.63
GGA3-221ENST00000614198 DONSONQ9NYP3 566 aa11.09□□□□□ -0.63
GGA3-221ENST00000614198 COL20A1Q9P218 1284 aa11.09□□□□□ -0.63
GGA3-221ENST00000614198 KIAA1468Q9P260 1216 aa11.09□□□□□ -0.63
GGA3-221ENST00000614198 FAM86B1E9PN63 330 aa11.09□□□□□ -0.63
GGA3-221ENST00000614198 ACTN4O43707 911 aaKnown RBP11.09□□□□□ -0.63
GGA3-221ENST00000614198 FAM86B2P0C5J1 330 aa11.09□□□□□ -0.63
GGA3-221ENST00000614198 ALAS1P13196 640 aa11.09□□□□□ -0.63
GGA3-221ENST00000614198 SMARCA1P28370 1054 aa11.09□□□□□ -0.63
GGA3-221ENST00000614198 ECM1Q16610 540 aa11.09□□□□□ -0.63
GGA3-221ENST00000614198 TRMT1LQ7Z2T5 733 aaKnown RBP11.09□□□□□ -0.63
GGA3-221ENST00000614198 CCDC102AQ96A19 550 aa11.09□□□□□ -0.63
GGA3-221ENST00000614198 HOOK2Q96ED9 719 aa11.09□□□□□ -0.63
GGA3-221ENST00000614198 PDE11AQ9HCR9 933 aa11.09□□□□□ -0.63
GGA3-221ENST00000614198 MDM2Q00987 491 aaPredicted RBP11.08□□□□□ -0.64
GGA3-221ENST00000614198 ZNF280CQ8ND82 737 aa11.08□□□□□ -0.64
GGA3-221ENST00000614198 HAS1Q92839 578 aa11.08□□□□□ -0.64
GGA3-221ENST00000614198 MAPK8IP1Q9UQF2 711 aa11.08□□□□□ -0.64
GGA3-221ENST00000614198 SNCAIPQ9Y6H5 919 aa11.08□□□□□ -0.64
GGA3-221ENST00000614198 IRF6O14896 467 aa11.08□□□□□ -0.64
GGA3-221ENST00000614198 SORBS3O60504 671 aa11.08□□□□□ -0.64
GGA3-221ENST00000614198 BACE1P56817 501 aa11.08□□□□□ -0.64
GGA3-221ENST00000614198 PRR16Q569H4 304 aa11.08□□□□□ -0.64
GGA3-221ENST00000614198 HDXQ7Z353 690 aa11.08□□□□□ -0.64
GGA3-221ENST00000614198 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.08□□□□□ -0.647e-10■■□□□ 14.3
GGA3-221ENST00000614198 CDCA5Q96FF9 252 aa11.08□□□□□ -0.64
GGA3-221ENST00000614198 ANO3Q9BYT9 981 aa11.08□□□□□ -0.64
GGA3-221ENST00000614198 RRAGCQ9HB90 399 aa11.08□□□□□ -0.64
GGA3-221ENST00000614198 GLTPD2A6NH11 291 aa11.07□□□□□ -0.64
GGA3-221ENST00000614198 NT5C2P49902 561 aa11.07□□□□□ -0.64
GGA3-221ENST00000614198 BTNL9Q6UXG8 535 aa11.07□□□□□ -0.64
GGA3-221ENST00000614198 LRRC31Q6UY01 552 aa11.07□□□□□ -0.64
GGA3-221ENST00000614198 KRT25Q7Z3Z0 450 aa11.07□□□□□ -0.64
GGA3-221ENST00000614198 CCDC12Q8WUD4 166 aaPredicted RBP11.07□□□□□ -0.64
GGA3-221ENST00000614198 HPS3Q969F9 1004 aa11.07□□□□□ -0.64
GGA3-221ENST00000614198 EEF2KMTQ96G04 330 aa11.07□□□□□ -0.64
GGA3-221ENST00000614198 CEP131Q9UPN4 1083 aa11.07□□□□□ -0.64
GGA3-221ENST00000614198 EIF3JO75822 258 aaKnown RBP11.07□□□□□ -0.64
GGA3-221ENST00000614198 PLS1Q14651 629 aa11.07□□□□□ -0.64
GGA3-221ENST00000614198 BEND6Q5SZJ8 279 aaPredicted RBP11.07□□□□□ -0.64
GGA3-221ENST00000614198 DTHD1Q6ZMT9 781 aa11.07□□□□□ -0.64
GGA3-221ENST00000614198 RASSF8Q8NHQ8 419 aa11.07□□□□□ -0.64
GGA3-221ENST00000614198 IL31RAQ8NI17 732 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms