RNA–Protein interactions for RNA: ENST00000614035.4

TNFAIP3-207, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-207ENST00000614035 SP2Q02086 613 aa20.39■□□□□ 0.85
TNFAIP3-207ENST00000614035 HSDL1Q3SXM5 330 aa20.39■□□□□ 0.85
TNFAIP3-207ENST00000614035 C7orf31Q8N865 590 aa20.39■□□□□ 0.85
TNFAIP3-207ENST00000614035 AFAP1L1Q8TED9 768 aa20.39■□□□□ 0.85
TNFAIP3-207ENST00000614035 PIBF1Q8WXW3 757 aa20.39■□□□□ 0.85
TNFAIP3-207ENST00000614035 SPATA33Q96N06 139 aa20.39■□□□□ 0.85
TNFAIP3-207ENST00000614035 ANO2Q9NQ90 1003 aa20.39■□□□□ 0.85
TNFAIP3-207ENST00000614035 CCDC69A6NI79 296 aa20.38■□□□□ 0.85
TNFAIP3-207ENST00000614035 ZBBXA8MT70 800 aa20.38■□□□□ 0.85
TNFAIP3-207ENST00000614035 PIK3CDO00329 1044 aa20.38■□□□□ 0.85
TNFAIP3-207ENST00000614035 ATP2A2P16615 1042 aaKnown RBP20.38■□□□□ 0.85
TNFAIP3-207ENST00000614035 MFSD10Q14728 455 aa20.38■□□□□ 0.85
TNFAIP3-207ENST00000614035 NFXL1Q6ZNB6 911 aa20.38■□□□□ 0.85
TNFAIP3-207ENST00000614035 INPP4AQ96PE3 977 aaPredicted RBP20.38■□□□□ 0.85
TNFAIP3-207ENST00000614035 NKX2-4Q9H2Z4 354 aa20.38■□□□□ 0.85
TNFAIP3-207ENST00000614035 SLC28A3Q9HAS3 691 aa20.38■□□□□ 0.85
TNFAIP3-207ENST00000614035 HDAC6Q9UBN7 1215 aa20.38■□□□□ 0.85
TNFAIP3-207ENST00000614035 SEC63Q9UGP8 760 aaKnown RBP20.38■□□□□ 0.85
TNFAIP3-207ENST00000614035 PCDHA11Q9Y5I1 949 aa20.38■□□□□ 0.85
TNFAIP3-207ENST00000614035 TRIP12Q14669 1992 aaPredicted RBP20.38■□□□□ 0.85
TNFAIP3-207ENST00000614035 CALM1P0DP23 149 aa20.37■□□□□ 0.85
TNFAIP3-207ENST00000614035 CALM2P0DP24 149 aa20.37■□□□□ 0.85
TNFAIP3-207ENST00000614035 CALM3P0DP25 149 aa20.37■□□□□ 0.85
TNFAIP3-207ENST00000614035 MRPS9P82933 396 aaKnown RBP20.37■□□□□ 0.85
TNFAIP3-207ENST00000614035 KIAA0753Q2KHM9 967 aa20.37■□□□□ 0.85
TNFAIP3-207ENST00000614035 SRBD1Q8N5C6 995 aaKnown RBP20.37■□□□□ 0.85
TNFAIP3-207ENST00000614035 DHX38Q92620 1227 aaKnown RBP20.37■□□□□ 0.85
TNFAIP3-207ENST00000614035 GAS2L1Q99501 681 aaPredicted RBP20.37■□□□□ 0.85
TNFAIP3-207ENST00000614035 PRDM12Q9H4Q4 367 aa20.37■□□□□ 0.85
TNFAIP3-207ENST00000614035 TET1Q8NFU7 2136 aa20.37■□□□□ 0.85
TNFAIP3-207ENST00000614035 MYO9BQ13459 2157 aa20.37■□□□□ 0.85
TNFAIP3-207ENST00000614035 PLEKHA8P1O95397 391 aa20.36■□□□□ 0.85
TNFAIP3-207ENST00000614035 ICAM3P32942 547 aa20.36■□□□□ 0.85
TNFAIP3-207ENST00000614035 RABGGTBP53611 331 aa20.36■□□□□ 0.85
TNFAIP3-207ENST00000614035 GNPTABQ3T906 1256 aa20.36■□□□□ 0.85
TNFAIP3-207ENST00000614035 GPKOWQ92917 476 aaPredicted RBP eCLIP20.36■□□□□ 0.852e-6■■■■■ 37.1
TNFAIP3-207ENST00000614035 ZFP91Q96JP5 570 aaPredicted RBP20.36■□□□□ 0.85
TNFAIP3-207ENST00000614035 SLC9A7Q96T83 725 aa20.36■□□□□ 0.85
TNFAIP3-207ENST00000614035 C16orf70Q9BSU1 422 aa20.36■□□□□ 0.85
TNFAIP3-207ENST00000614035 ALG1Q9BT22 464 aa20.36■□□□□ 0.85
TNFAIP3-207ENST00000614035 MEIS2O14770 477 aa20.36■□□□□ 0.85
TNFAIP3-207ENST00000614035 PARNO95453 639 aaKnown RBP20.36■□□□□ 0.85
TNFAIP3-207ENST00000614035 SELPP16109 830 aa20.36■□□□□ 0.85
TNFAIP3-207ENST00000614035 PTK7Q13308 1070 aa20.36■□□□□ 0.85
TNFAIP3-207ENST00000614035 GPNMBQ14956 572 aa20.36■□□□□ 0.85
TNFAIP3-207ENST00000614035 LRRC8DQ7L1W4 858 aa20.36■□□□□ 0.85
TNFAIP3-207ENST00000614035 SGMS1Q86VZ5 419 aa20.36■□□□□ 0.85
TNFAIP3-207ENST00000614035 PHOSPHO2Q8TCD6 241 aa20.36■□□□□ 0.85
TNFAIP3-207ENST00000614035 COL25A1Q9BXS0 654 aaPredicted RBP20.36■□□□□ 0.85
TNFAIP3-207ENST00000614035 FTOQ9C0B1 505 aaKnown RBP eCLIP20.36■□□□□ 0.85
TNFAIP3-207ENST00000614035 MLXIPQ9HAP2 919 aa20.36■□□□□ 0.85
TNFAIP3-207ENST00000614035 SLC12A7Q9Y666 1083 aa20.36■□□□□ 0.85
TNFAIP3-207ENST00000614035 VCANP13611 3396 aa20.36■□□□□ 0.85
TNFAIP3-207ENST00000614035 SPATA31C2B4DYI2 1134 aa20.35■□□□□ 0.85
TNFAIP3-207ENST00000614035 FIBPO43427 364 aa20.35■□□□□ 0.85
TNFAIP3-207ENST00000614035 SORBS3O60504 671 aa20.35■□□□□ 0.85
TNFAIP3-207ENST00000614035 BAIAP3O94812 1187 aa20.35■□□□□ 0.85
TNFAIP3-207ENST00000614035 CKBP12277 381 aa20.35■□□□□ 0.85
TNFAIP3-207ENST00000614035 MYOGP15173 224 aa20.35■□□□□ 0.85
TNFAIP3-207ENST00000614035 RNF20Q5VTR2 975 aa20.35■□□□□ 0.85
TNFAIP3-207ENST00000614035 PCNX4Q63HM2 1172 aa20.35■□□□□ 0.85
TNFAIP3-207ENST00000614035 XRRA1Q6P2D8 792 aa20.35■□□□□ 0.85
TNFAIP3-207ENST00000614035 USP17L6PQ6QN14 398 aa20.35■□□□□ 0.85
TNFAIP3-207ENST00000614035 SKAP1Q86WV1 359 aa20.35■□□□□ 0.85
TNFAIP3-207ENST00000614035 SMARCC2Q8TAQ2 1214 aa20.35■□□□□ 0.85
TNFAIP3-207ENST00000614035 CUL5Q93034 780 aa20.35■□□□□ 0.85
TNFAIP3-207ENST00000614035 RXRAP19793 462 aa20.34■□□□□ 0.85
TNFAIP3-207ENST00000614035 SEMA3FQ13275 785 aa20.34■□□□□ 0.85
TNFAIP3-207ENST00000614035 NEDD9Q14511 834 aa20.34■□□□□ 0.85
TNFAIP3-207ENST00000614035 TRIM71Q2Q1W2 868 aaKnown RBP20.34■□□□□ 0.85
TNFAIP3-207ENST00000614035 PPP2R2DQ66LE6 453 aa20.34■□□□□ 0.85
TNFAIP3-207ENST00000614035 METTL7BQ6UX53 244 aa20.34■□□□□ 0.85
TNFAIP3-207ENST00000614035 CMTR1Q8N1G2 835 aaKnown RBP20.34■□□□□ 0.85
TNFAIP3-207ENST00000614035 USP38Q8NB14 1042 aa20.34■□□□□ 0.85
TNFAIP3-207ENST00000614035 FANCBQ8NB91 859 aa20.34■□□□□ 0.85
TNFAIP3-207ENST00000614035 CXCL10P02778 98 aa20.33■□□□□ 0.84
TNFAIP3-207ENST00000614035 ADGRE1Q14246 886 aa20.33■□□□□ 0.84
TNFAIP3-207ENST00000614035 HIC1Q14526 733 aa20.33■□□□□ 0.84
TNFAIP3-207ENST00000614035 TMTC3Q6ZXV5 915 aa20.33■□□□□ 0.84
TNFAIP3-207ENST00000614035 LRRC2Q9BYS8 371 aa20.33■□□□□ 0.84
TNFAIP3-207ENST00000614035 BCAS3Q9H6U6 928 aa20.33■□□□□ 0.84
TNFAIP3-207ENST00000614035 RTEL1Q9NZ71 1219 aa20.33■□□□□ 0.84
TNFAIP3-207ENST00000614035 HOXC8P31273 242 aa20.32■□□□□ 0.84
TNFAIP3-207ENST00000614035 TRAF7Q6Q0C0 670 aa20.32■□□□□ 0.84
TNFAIP3-207ENST00000614035 WNT8BQ93098 351 aa20.32■□□□□ 0.84
TNFAIP3-207ENST00000614035 NEK1Q96PY6 1258 aa20.32■□□□□ 0.84
TNFAIP3-207ENST00000614035 PSTPIP2Q9H939 334 aa20.32■□□□□ 0.84
TNFAIP3-207ENST00000614035 H3BRB1 525 aa20.31■□□□□ 0.84
TNFAIP3-207ENST00000614035 NOP56O00567 594 aaKnown RBP20.31■□□□□ 0.84
TNFAIP3-207ENST00000614035 NBNO60934 754 aa20.31■□□□□ 0.84
TNFAIP3-207ENST00000614035 LGALS2P05162 132 aa20.31■□□□□ 0.84
TNFAIP3-207ENST00000614035 ZNF200P98182 395 aaPredicted RBP20.31■□□□□ 0.84
TNFAIP3-207ENST00000614035 TSGA10IPQ3SY00 556 aa20.31■□□□□ 0.84
TNFAIP3-207ENST00000614035 SERINC5Q86VE9 423 aa20.31■□□□□ 0.84
TNFAIP3-207ENST00000614035 MICU3Q86XE3 530 aa20.31■□□□□ 0.84
TNFAIP3-207ENST00000614035 RAB11FIP4Q86YS3 637 aa20.31■□□□□ 0.84
TNFAIP3-207ENST00000614035 HERC6Q8IVU3 1022 aa20.31■□□□□ 0.84
TNFAIP3-207ENST00000614035 SENP7Q9BQF6 1050 aa20.31■□□□□ 0.84
TNFAIP3-207ENST00000614035 USP26Q9BXU7 913 aa20.31■□□□□ 0.84
TNFAIP3-207ENST00000614035 TUT1Q9H6E5 874 aaKnown RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms