RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 RGS20O76081 388 aa16.65■□□□□ 0.26
CD48-203ENST00000613788 NCLP19338 710 aaKnown RBP16.65■□□□□ 0.26
CD48-203ENST00000613788 PTGDRQ13258 359 aa16.65■□□□□ 0.26
CD48-203ENST00000613788 CALCRLQ16602 461 aa16.65■□□□□ 0.26
CD48-203ENST00000613788 CTU1Q7Z7A3 348 aaKnown RBP16.65■□□□□ 0.26
CD48-203ENST00000613788 LENG9Q96B70 501 aa16.65■□□□□ 0.26
CD48-203ENST00000613788 FAM20AQ96MK3 541 aa16.65■□□□□ 0.26
CD48-203ENST00000613788 MYH7BA7E2Y1 1941 aa16.65■□□□□ 0.26
CD48-203ENST00000613788 YEATS4O95619 227 aa16.65■□□□□ 0.26
CD48-203ENST00000613788 HMGCRP04035 888 aa16.65■□□□□ 0.26
CD48-203ENST00000613788 ARP10275 920 aa16.65■□□□□ 0.26
CD48-203ENST00000613788 NASPP49321 788 aaPredicted RBP16.65■□□□□ 0.26
CD48-203ENST00000613788 POTEDQ86YR6 584 aa16.65■□□□□ 0.26
CD48-203ENST00000613788 FBXO16Q8IX29 292 aaPredicted RBP16.65■□□□□ 0.26
CD48-203ENST00000613788 SLFN12Q8IYM2 578 aa16.65■□□□□ 0.26
CD48-203ENST00000613788 SCFD2Q8WU76 684 aa16.65■□□□□ 0.26
CD48-203ENST00000613788 ZNF577Q9BSK1 485 aa16.65■□□□□ 0.26
CD48-203ENST00000613788 SCAND2PQ9GZW5 306 aaPredicted RBP16.65■□□□□ 0.26
CD48-203ENST00000613788 KATNBL1Q9H079 304 aa16.65■□□□□ 0.26
CD48-203ENST00000613788 ZHX1Q9UKY1 873 aaPredicted RBP16.65■□□□□ 0.26
CD48-203ENST00000613788 PTCH2Q9Y6C5 1203 aa16.65■□□□□ 0.26
CD48-203ENST00000613788 MRVI1Q9Y6F6 885 aa16.65■□□□□ 0.26
CD48-203ENST00000613788 RBM47A0AV96 593 aaKnown RBP16.64■□□□□ 0.25
CD48-203ENST00000613788 MSH4O15457 936 aa16.64■□□□□ 0.25
CD48-203ENST00000613788 ELNP15502 786 aa16.64■□□□□ 0.25
CD48-203ENST00000613788 GRK4P32298 578 aa16.64■□□□□ 0.25
CD48-203ENST00000613788 ATP2C1P98194 919 aaPredicted RBP16.64■□□□□ 0.25
CD48-203ENST00000613788 TTLL4Q14679 1199 aa16.64■□□□□ 0.25
CD48-203ENST00000613788 SLC39A14Q15043 492 aa16.64■□□□□ 0.25
CD48-203ENST00000613788 STK38Q15208 465 aa16.64■□□□□ 0.25
CD48-203ENST00000613788 PKN2Q16513 984 aaKnown RBP16.64■□□□□ 0.25
CD48-203ENST00000613788 IQSEC1Q6DN90 963 aa16.64■□□□□ 0.25
CD48-203ENST00000613788 TAPT1Q6NXT6 567 aa16.64■□□□□ 0.25
CD48-203ENST00000613788 C4orf32Q8N8J7 132 aa16.64■□□□□ 0.25
CD48-203ENST00000613788 GIMAP8Q8ND71 665 aaPredicted RBP16.64■□□□□ 0.25
CD48-203ENST00000613788 FTOQ9C0B1 505 aaKnown RBP eCLIP16.64■□□□□ 0.25
CD48-203ENST00000613788 AGO4Q9HCK5 861 aaKnown RBP16.64■□□□□ 0.25
CD48-203ENST00000613788 KCNMB3Q9NPA1 279 aa16.64■□□□□ 0.25
CD48-203ENST00000613788 IPO5O00410 1097 aaKnown RBP16.63■□□□□ 0.25
CD48-203ENST00000613788 OR52Z1P0C646 297 aa16.63■□□□□ 0.25
CD48-203ENST00000613788 PRPHP41219 470 aa16.63■□□□□ 0.25
CD48-203ENST00000613788 PTPAQ15257 358 aa16.63■□□□□ 0.25
CD48-203ENST00000613788 PRAMEF19Q5SWL8 479 aa16.63■□□□□ 0.25
CD48-203ENST00000613788 ARL6IP4Q66PJ3 421 aaKnown RBP16.63■□□□□ 0.25
CD48-203ENST00000613788 LINC00301Q8NCQ3 95 aa16.63■□□□□ 0.25
CD48-203ENST00000613788 ETNPPLQ8TBG4 499 aa16.63■□□□□ 0.25
CD48-203ENST00000613788 MTMR9Q96QG7 549 aa16.63■□□□□ 0.25
CD48-203ENST00000613788 RIT2Q99578 217 aa16.63■□□□□ 0.25
CD48-203ENST00000613788 SENP7Q9BQF6 1050 aa16.63■□□□□ 0.25
CD48-203ENST00000613788 TMEM60Q9H2L4 133 aa16.63■□□□□ 0.25
CD48-203ENST00000613788 TBC1D22BQ9NU19 505 aa16.63■□□□□ 0.25
CD48-203ENST00000613788 RCOR1Q9UKL0 485 aa16.63■□□□□ 0.25
CD48-203ENST00000613788 MORC2Q9Y6X9 1032 aaPredicted RBP16.63■□□□□ 0.25
CD48-203ENST00000613788 CASP8AP2Q9UKL3 1982 aa16.62■□□□□ 0.25
CD48-203ENST00000613788 SPTLC2O15270 562 aa16.62■□□□□ 0.25
CD48-203ENST00000613788 ZNF865P0CJ78 1059 aaPredicted RBP16.62■□□□□ 0.25
CD48-203ENST00000613788 TXNP10599 105 aaKnown RBP16.62■□□□□ 0.25
CD48-203ENST00000613788 CACNB2Q08289 660 aaPredicted RBP16.62■□□□□ 0.25
CD48-203ENST00000613788 NEDD9Q14511 834 aa16.62■□□□□ 0.25
CD48-203ENST00000613788 KCNG4Q8TDN1 519 aa16.62■□□□□ 0.25
CD48-203ENST00000613788 HAS1Q92839 578 aa16.62■□□□□ 0.25
CD48-203ENST00000613788 SLC5A5Q92911 643 aa16.62■□□□□ 0.25
CD48-203ENST00000613788 SPATA32Q96LK8 384 aa16.62■□□□□ 0.25
CD48-203ENST00000613788 SDF4Q9BRK5 362 aa16.62■□□□□ 0.25
CD48-203ENST00000613788 PRDM10Q9NQV6 1147 aa16.62■□□□□ 0.25
CD48-203ENST00000613788 PDGFCQ9NRA1 345 aa16.62■□□□□ 0.25
CD48-203ENST00000613788 DDX41Q9UJV9 622 aaKnown RBP16.62■□□□□ 0.25
CD48-203ENST00000613788 FAM184BQ9ULE4 1060 aa16.62■□□□□ 0.25
CD48-203ENST00000613788 PCDHA12Q9UN75 941 aa16.62■□□□□ 0.25
CD48-203ENST00000613788 NKRFO15226 690 aaKnown RBP eCLIP16.61■□□□□ 0.25
CD48-203ENST00000613788 PPP6R2O75170 966 aa16.61■□□□□ 0.25
CD48-203ENST00000613788 TXKP42681 527 aa16.61■□□□□ 0.25
CD48-203ENST00000613788 SEMA3FQ13275 785 aa16.61■□□□□ 0.25
CD48-203ENST00000613788 CSPP1Q1MSJ5 1256 aa16.61■□□□□ 0.25
CD48-203ENST00000613788 CCDC144BQ3MJ40 725 aa16.61■□□□□ 0.25
CD48-203ENST00000613788 LRCH2Q5VUJ6 765 aa16.61■□□□□ 0.25
CD48-203ENST00000613788 CCDC62Q6P9F0 684 aa16.61■□□□□ 0.25
CD48-203ENST00000613788 DTHD1Q6ZMT9 781 aa16.61■□□□□ 0.25
CD48-203ENST00000613788 CLEC17AQ6ZS10 378 aa16.61■□□□□ 0.25
CD48-203ENST00000613788 TCEAL9Q9UHQ7 104 aa16.61■□□□□ 0.25
CD48-203ENST00000613788 NFASCO94856 1347 aa16.61■□□□□ 0.25
CD48-203ENST00000613788 GAS7O60861 476 aa16.6■□□□□ 0.25
CD48-203ENST00000613788 ATP9AO75110 1047 aa16.6■□□□□ 0.25
CD48-203ENST00000613788 CYBAP13498 195 aa16.6■□□□□ 0.25
CD48-203ENST00000613788 PRKAR2AP13861 404 aaKnown RBP16.6■□□□□ 0.25
CD48-203ENST00000613788 KCNA2P16389 499 aa16.6■□□□□ 0.25
CD48-203ENST00000613788 ADCYAP1R1P41586 468 aa16.6■□□□□ 0.25
CD48-203ENST00000613788 TNFAIP2Q03169 654 aa16.6■□□□□ 0.25
CD48-203ENST00000613788 TMEM266Q2M3C6 531 aa16.6■□□□□ 0.25
CD48-203ENST00000613788 FBXO46Q6PJ61 603 aaPredicted RBP16.6■□□□□ 0.25
CD48-203ENST00000613788 LEO1Q8WVC0 666 aaPredicted RBP16.6■□□□□ 0.25
CD48-203ENST00000613788 FERMT2Q96AC1 680 aa16.6■□□□□ 0.25
CD48-203ENST00000613788 CHAMP1Q96JM3 812 aa16.6■□□□□ 0.25
CD48-203ENST00000613788 GBP4Q96PP9 640 aa16.6■□□□□ 0.25
CD48-203ENST00000613788 TEKT3Q9BXF9 490 aa16.6■□□□□ 0.25
CD48-203ENST00000613788 TTC12Q9H892 705 aaPredicted RBP16.6■□□□□ 0.25
CD48-203ENST00000613788 PKD2L1Q9P0L9 805 aa16.6■□□□□ 0.25
CD48-203ENST00000613788 INHAP05111 366 aa16.6■□□□□ 0.25
CD48-203ENST00000613788 AKR1A1P14550 325 aa16.6■□□□□ 0.25
CD48-203ENST00000613788 MARCKSP29966 332 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms