RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 ZEB2O60315 1214 aa15.09■□□□□ 0.01
MDC1-209ENST00000613547 CAPN15O75808 1086 aa15.09■□□□□ 0.01
MDC1-209ENST00000613547 FARP2O94887 1054 aaPredicted RBP15.09■□□□□ 0.01
MDC1-209ENST00000613547 ITGB5P18084 799 aa15.09■□□□□ 0.01
MDC1-209ENST00000613547 CPT1AP50416 773 aa15.09■□□□□ 0.01
MDC1-209ENST00000613547 SETQ01105 290 aaPredicted RBP15.09■□□□□ 0.01
MDC1-209ENST00000613547 BECN1Q14457 450 aa15.09■□□□□ 0.01
MDC1-209ENST00000613547 NEDD9Q14511 834 aa15.09■□□□□ 0.01
MDC1-209ENST00000613547 LRRC41Q15345 812 aa15.09■□□□□ 0.01
MDC1-209ENST00000613547 LY6KQ17RY6 165 aa15.09■□□□□ 0.01
MDC1-209ENST00000613547 LARP1BQ659C4 914 aaKnown RBP15.09■□□□□ 0.01
MDC1-209ENST00000613547 PIK3AP1Q6ZUJ8 805 aa15.09■□□□□ 0.01
MDC1-209ENST00000613547 PCSK9Q8NBP7 692 aaKnown RBP15.09■□□□□ 0.01
MDC1-209ENST00000613547 OXER1Q8TDS5 423 aa15.09■□□□□ 0.01
MDC1-209ENST00000613547 CRYGNQ8WXF5 182 aa15.09■□□□□ 0.01
MDC1-209ENST00000613547 DDX41Q9UJV9 622 aaKnown RBP15.09■□□□□ 0.01
MDC1-209ENST00000613547 LRRC37A2A6NM11 1700 aa15.09■□□□□ 0.01
MDC1-209ENST00000613547 BTBD18B2RXH4 712 aa15.08■□□□□ 0
MDC1-209ENST00000613547 ADAMTS4O75173 837 aa15.08■□□□□ 0
MDC1-209ENST00000613547 ARIH2O95376 493 aa15.08■□□□□ 0
MDC1-209ENST00000613547 UBA1P22314 1058 aaKnown RBP15.08■□□□□ 0
MDC1-209ENST00000613547 CST5P28325 142 aaPredicted RBP15.08■□□□□ 0
MDC1-209ENST00000613547 NR5A1Q13285 461 aa15.08■□□□□ 0
MDC1-209ENST00000613547 LAMC2Q13753 1193 aa15.08■□□□□ 0
MDC1-209ENST00000613547 FSCN1Q16658 493 aaKnown RBP15.08■□□□□ 0
MDC1-209ENST00000613547 INF2Q27J81 1249 aa15.08■□□□□ 0
MDC1-209ENST00000613547 GNASQ5JWF2 1037 aa15.08■□□□□ 0
MDC1-209ENST00000613547 GJC2Q5T442 439 aaPredicted RBP15.08■□□□□ 0
MDC1-209ENST00000613547 NEK8Q86SG6 692 aa15.08■□□□□ 0
MDC1-209ENST00000613547 PLA2G4DQ86XP0 818 aa15.08■□□□□ 0
MDC1-209ENST00000613547 SENP7Q9BQF6 1050 aa15.08■□□□□ 0
MDC1-209ENST00000613547 TSEN34Q9BSV6 310 aaKnown RBP15.08■□□□□ 0
MDC1-209ENST00000613547 FOXP1Q9H334 677 aaPredicted RBP15.08■□□□□ 0
MDC1-209ENST00000613547 MLXIPQ9HAP2 919 aa15.08■□□□□ 0
MDC1-209ENST00000613547 KCNH7Q9NS40 1196 aa15.08■□□□□ 0
MDC1-209ENST00000613547 MOXD2PA6NHM9 499 aa15.07■□□□□ 0
MDC1-209ENST00000613547 MEIS1O00470 390 aa15.07■□□□□ 0
MDC1-209ENST00000613547 GGPS1O95749 300 aa15.07■□□□□ 0
MDC1-209ENST00000613547 GCFC2P16383 781 aaKnown RBP15.07■□□□□ 0
MDC1-209ENST00000613547 CIITAP33076 1130 aa15.07■□□□□ 0
MDC1-209ENST00000613547 NKX3-2P78367 333 aa15.07■□□□□ 0
MDC1-209ENST00000613547 PRR16Q569H4 304 aa15.07■□□□□ 0
MDC1-209ENST00000613547 MOXD1Q6UVY6 613 aa15.07■□□□□ 0
MDC1-209ENST00000613547 NECAB2Q7Z6G3 386 aa15.07■□□□□ 0
MDC1-209ENST00000613547 EMID1Q96A84 441 aaPredicted RBP15.07■□□□□ 0
MDC1-209ENST00000613547 SDF4Q9BRK5 362 aa15.07■□□□□ 0
MDC1-209ENST00000613547 TCEAL9Q9UHQ7 104 aa15.07■□□□□ 0
MDC1-209ENST00000613547 FAM86B1E9PN63 330 aa15.06■□□□□ 0
MDC1-209ENST00000613547 KPNA6O60684 536 aa15.06■□□□□ 0
MDC1-209ENST00000613547 FAM86B2P0C5J1 330 aa15.06■□□□□ 0
MDC1-209ENST00000613547 ARHGAP1Q07960 439 aa15.06■□□□□ 0
MDC1-209ENST00000613547 LETM2Q2VYF4 491 aa15.06■□□□□ 0
MDC1-209ENST00000613547 CELF3Q5SZQ8 465 aaKnown RBP15.06■□□□□ 0
MDC1-209ENST00000613547 TMEM63BQ5T3F8 832 aa15.06■□□□□ 0
MDC1-209ENST00000613547 MCTP1Q6DN14 999 aa15.06■□□□□ 0
MDC1-209ENST00000613547 NOSTRINQ8IVI9 506 aa15.06■□□□□ 0
MDC1-209ENST00000613547 COPS5Q92905 334 aa15.06■□□□□ 0
MDC1-209ENST00000613547 TNFRSF25Q93038 417 aa15.06■□□□□ 0
MDC1-209ENST00000613547 PAWRQ96IZ0 340 aaKnown RBP15.06■□□□□ 0
MDC1-209ENST00000613547 SPATA33Q96N06 139 aa15.06■□□□□ 0
MDC1-209ENST00000613547 C11orf49Q9H6J7 331 aa15.06■□□□□ 0
MDC1-209ENST00000613547 FOXD4L1Q9NU39 408 aa15.06■□□□□ 0
MDC1-209ENST00000613547 POLR3EQ9NVU0 708 aa15.06■□□□□ 0
MDC1-209ENST00000613547 KIAA0100Q14667 2235 aaKnown RBP15.06■□□□□ 0
MDC1-209ENST00000613547 IGLV3-22A0A075B6J6 115 aa15.05■□□□□ -0
MDC1-209ENST00000613547 A6NJR5 290 aa15.05■□□□□ -0
MDC1-209ENST00000613547 NOP56O00567 594 aaKnown RBP15.05■□□□□ -0
MDC1-209ENST00000613547 CABYRO75952 493 aa15.05■□□□□ -0
MDC1-209ENST00000613547 BEX3Q00994 111 aa15.05■□□□□ -0
MDC1-209ENST00000613547 SEMA3FQ13275 785 aa15.05■□□□□ -0
MDC1-209ENST00000613547 KCNA10Q16322 511 aa15.05■□□□□ -0
MDC1-209ENST00000613547 MYSM1Q5VVJ2 828 aa15.05■□□□□ -0
MDC1-209ENST00000613547 PPP4R3AQ6IN85 833 aa15.05■□□□□ -0
MDC1-209ENST00000613547 METTL7BQ6UX53 244 aa15.05■□□□□ -0
MDC1-209ENST00000613547 CYFIP1Q7L576 1253 aa15.05■□□□□ -0
MDC1-209ENST00000613547 KLHDC9Q8NEP7 349 aa15.05■□□□□ -0
MDC1-209ENST00000613547 PPTC7Q8NI37 304 aa15.05■□□□□ -0
MDC1-209ENST00000613547 CYP2W1Q8TAV3 490 aa15.05■□□□□ -0
MDC1-209ENST00000613547 GLT1D1Q96MS3 346 aa15.05■□□□□ -0
MDC1-209ENST00000613547 ZNF577Q9BSK1 485 aa15.05■□□□□ -0
MDC1-209ENST00000613547 PKD2L1Q9P0L9 805 aa15.05■□□□□ -0
MDC1-209ENST00000613547 DDX25Q9UHL0 483 aaKnown RBP15.05■□□□□ -0
MDC1-209ENST00000613547 NOL7Q9UMY1 257 aaKnown RBP15.05■□□□□ -0
MDC1-209ENST00000613547 PHF24Q9UPV7 400 aa15.05■□□□□ -0
MDC1-209ENST00000613547 MCM3APO60318 1980 aa15.05■□□□□ -0
MDC1-209ENST00000613547 NFASCO94856 1347 aa15.04■□□□□ -0
MDC1-209ENST00000613547 CYP3A7-CYP3A51PA0A087WV96 503 aa15.04■□□□□ -0
MDC1-209ENST00000613547 VPS37CA5D8V6 355 aaPredicted RBP15.04■□□□□ -0
MDC1-209ENST00000613547 MYADML2A6NDP7 307 aa15.04■□□□□ -0
MDC1-209ENST00000613547 IPO5O00410 1097 aaKnown RBP15.04■□□□□ -0
MDC1-209ENST00000613547 CCNT1O60563 726 aaKnown RBP15.04■□□□□ -0
MDC1-209ENST00000613547 TDP2O95551 362 aa15.04■□□□□ -0
MDC1-209ENST00000613547 ASGR1P07306 291 aa15.04■□□□□ -0
MDC1-209ENST00000613547 MYL3P08590 195 aa15.04■□□□□ -0
MDC1-209ENST00000613547 ARP10275 920 aa15.04■□□□□ -0
MDC1-209ENST00000613547 PDIA4P13667 645 aaKnown RBP15.04■□□□□ -0
MDC1-209ENST00000613547 KCNA2P16389 499 aa15.04■□□□□ -0
MDC1-209ENST00000613547 PTGS1P23219 599 aa15.04■□□□□ -0
MDC1-209ENST00000613547 CYP3A7P24462 503 aa15.04■□□□□ -0
MDC1-209ENST00000613547 U2AF2P26368 475 aaKnown RBP eCLIP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms