RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 DMDP11532 3685 aa8.59□□□□□ -1.03
PTCHD3P1-201ENST00000612350 CYP2D7A0A087X1C5 515 aa8.59□□□□□ -1.03
PTCHD3P1-201ENST00000612350 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.59□□□□□ -1.03
PTCHD3P1-201ENST00000612350 LMNAP02545 664 aaKnown RBP8.59□□□□□ -1.03
PTCHD3P1-201ENST00000612350 MMP1P03956 469 aa8.59□□□□□ -1.03
PTCHD3P1-201ENST00000612350 CTNNB1P35222 781 aa8.59□□□□□ -1.03
PTCHD3P1-201ENST00000612350 CLCN5P51795 746 aa8.59□□□□□ -1.03
PTCHD3P1-201ENST00000612350 PLEKHG4Q58EX7 1191 aa8.59□□□□□ -1.03
PTCHD3P1-201ENST00000612350 BRDTQ58F21 947 aaPredicted RBP8.59□□□□□ -1.03
PTCHD3P1-201ENST00000612350 ADGRD2Q7Z7M1 963 aa8.59□□□□□ -1.03
PTCHD3P1-201ENST00000612350 LCORLQ8N3X6 602 aa8.59□□□□□ -1.03
PTCHD3P1-201ENST00000612350 KAT2BQ92831 832 aa8.59□□□□□ -1.03
PTCHD3P1-201ENST00000612350 COPS5Q92905 334 aa8.59□□□□□ -1.03
PTCHD3P1-201ENST00000612350 YTHDC1Q96MU7 727 aaKnown RBP8.59□□□□□ -1.03
PTCHD3P1-201ENST00000612350 TRERF1Q96PN7 1200 aa8.59□□□□□ -1.03
PTCHD3P1-201ENST00000612350 C11orf84Q9BUA3 381 aaPredicted RBP8.59□□□□□ -1.03
PTCHD3P1-201ENST00000612350 RYDENQ9NUL5 291 aaKnown RBP8.59□□□□□ -1.03
PTCHD3P1-201ENST00000612350 NYAP2Q9P242 653 aa8.59□□□□□ -1.03
PTCHD3P1-201ENST00000612350 DBNLQ9UJU6 430 aaKnown RBP8.59□□□□□ -1.03
PTCHD3P1-201ENST00000612350 FEM1BQ9UK73 627 aa8.59□□□□□ -1.03
PTCHD3P1-201ENST00000612350 NOB1Q9ULX3 412 aaKnown RBP8.59□□□□□ -1.03
PTCHD3P1-201ENST00000612350 USP24Q9UPU5 2620 aa8.58□□□□□ -1.04
PTCHD3P1-201ENST00000612350 PNMA6EA0A0J9YXQ4 647 aa8.58□□□□□ -1.04
PTCHD3P1-201ENST00000612350 NKRFO15226 690 aaKnown RBP eCLIP8.58□□□□□ -1.04
PTCHD3P1-201ENST00000612350 PRKAB2O43741 272 aa8.58□□□□□ -1.04
PTCHD3P1-201ENST00000612350 UPP2O95045 317 aa8.58□□□□□ -1.04
PTCHD3P1-201ENST00000612350 BRD1O95696 1058 aa8.58□□□□□ -1.04
PTCHD3P1-201ENST00000612350 FDX1P10109 184 aa8.58□□□□□ -1.04
PTCHD3P1-201ENST00000612350 MS4A1P11836 297 aa8.58□□□□□ -1.04
PTCHD3P1-201ENST00000612350 CHMP4BP1P59074 171 aa8.58□□□□□ -1.04
PTCHD3P1-201ENST00000612350 PTK7Q13308 1070 aa8.58□□□□□ -1.04
PTCHD3P1-201ENST00000612350 ACAP1Q15027 740 aa8.58□□□□□ -1.04
PTCHD3P1-201ENST00000612350 RSPO4Q2I0M5 234 aaPredicted RBP8.58□□□□□ -1.04
PTCHD3P1-201ENST00000612350 TKFCQ3LXA3 575 aa8.58□□□□□ -1.04
PTCHD3P1-201ENST00000612350 MUM1L1Q5H9M0 696 aa8.58□□□□□ -1.04
PTCHD3P1-201ENST00000612350 ZKSCAN2Q63HK3 967 aa8.58□□□□□ -1.04
PTCHD3P1-201ENST00000612350 LRRC47Q8N1G4 583 aaKnown RBP8.58□□□□□ -1.04
PTCHD3P1-201ENST00000612350 FIBCD1Q8N539 461 aa8.58□□□□□ -1.04
PTCHD3P1-201ENST00000612350 KREMEN2Q8NCW0 462 aa8.58□□□□□ -1.04
PTCHD3P1-201ENST00000612350 PTCD2Q8WV60 388 aaKnown RBP8.58□□□□□ -1.04
PTCHD3P1-201ENST00000612350 SEMA4AQ9H3S1 761 aa8.58□□□□□ -1.04
PTCHD3P1-201ENST00000612350 TLR7Q9NYK1 1049 aaKnown RBP8.58□□□□□ -1.04
PTCHD3P1-201ENST00000612350 HDAC6Q9UBN7 1215 aa8.58□□□□□ -1.04
PTCHD3P1-201ENST00000612350 GTF2IRD1Q9UHL9 959 aa8.58□□□□□ -1.04
PTCHD3P1-201ENST00000612350 RCAN3Q9UKA8 241 aa8.58□□□□□ -1.04
PTCHD3P1-201ENST00000612350 BARX2Q9UMQ3 279 aaPredicted RBP8.58□□□□□ -1.04
PTCHD3P1-201ENST00000612350 FASNP49327 2511 aaKnown RBP8.58□□□□□ -1.04
PTCHD3P1-201ENST00000612350 LOC102724159A0A0B4J2E5 919 aa8.57□□□□□ -1.04
PTCHD3P1-201ENST00000612350 BCAR3O75815 825 aa8.57□□□□□ -1.04
PTCHD3P1-201ENST00000612350 ALAS1P13196 640 aa8.57□□□□□ -1.04
PTCHD3P1-201ENST00000612350 DNAJB1P25685 340 aa8.57□□□□□ -1.04
PTCHD3P1-201ENST00000612350 ALDH5A1P51649 535 aaPredicted RBP8.57□□□□□ -1.04
PTCHD3P1-201ENST00000612350 PWP2Q15269 919 aaKnown RBP8.57□□□□□ -1.04
PTCHD3P1-201ENST00000612350 UBALD2Q8IYN6 164 aa8.57□□□□□ -1.04
PTCHD3P1-201ENST00000612350 KCNG4Q8TDN1 519 aa8.57□□□□□ -1.04
PTCHD3P1-201ENST00000612350 CLP1Q92989 425 aaKnown RBP8.57□□□□□ -1.04
PTCHD3P1-201ENST00000612350 MKL1Q969V6 931 aa8.57□□□□□ -1.04
PTCHD3P1-201ENST00000612350 IL17RAQ96F46 866 aa8.57□□□□□ -1.04
PTCHD3P1-201ENST00000612350 OSBPL7Q9BZF2 842 aa8.57□□□□□ -1.04
PTCHD3P1-201ENST00000612350 SMOC2Q9H3U7 446 aa8.57□□□□□ -1.04
PTCHD3P1-201ENST00000612350 ATP8A2Q9NTI2 1148 aa8.57□□□□□ -1.04
PTCHD3P1-201ENST00000612350 PLAGL2Q9UPG8 496 aa8.57□□□□□ -1.04
PTCHD3P1-201ENST00000612350 CFAP47Q6ZTR5 3102 aa8.57□□□□□ -1.04
PTCHD3P1-201ENST00000612350 FAM208BQ5VWN6 2430 aa8.56□□□□□ -1.04
PTCHD3P1-201ENST00000612350 EMSYQ7Z589 1322 aa8.56□□□□□ -1.04
PTCHD3P1-201ENST00000612350 RAD50Q92878 1312 aa8.56□□□□□ -1.04
PTCHD3P1-201ENST00000612350 MYH4Q9Y623 1939 aa8.56□□□□□ -1.04
PTCHD3P1-201ENST00000612350 TCRBV5S4A2TA0A5A2 114 aa8.56□□□□□ -1.04
PTCHD3P1-201ENST00000612350 PI15O43692 258 aa8.56□□□□□ -1.04
PTCHD3P1-201ENST00000612350 CSPG5O95196 566 aa8.56□□□□□ -1.04
PTCHD3P1-201ENST00000612350 ARIH2O95376 493 aa8.56□□□□□ -1.04
PTCHD3P1-201ENST00000612350 PDE6AP16499 860 aa8.56□□□□□ -1.04
PTCHD3P1-201ENST00000612350 ATXN1P54253 815 aaKnown RBP8.56□□□□□ -1.04
PTCHD3P1-201ENST00000612350 ZNF200P98182 395 aaPredicted RBP8.56□□□□□ -1.04
PTCHD3P1-201ENST00000612350 MTMR3Q13615 1198 aa8.56□□□□□ -1.04
PTCHD3P1-201ENST00000612350 HIC1Q14526 733 aa8.56□□□□□ -1.04
PTCHD3P1-201ENST00000612350 PPP2R5BQ15173 497 aa8.56□□□□□ -1.04
PTCHD3P1-201ENST00000612350 ANGPT1Q15389 498 aa8.56□□□□□ -1.04
PTCHD3P1-201ENST00000612350 SLC9C2Q5TAH2 1124 aa8.56□□□□□ -1.04
PTCHD3P1-201ENST00000612350 CWF19L1Q69YN2 538 aaKnown RBP8.56□□□□□ -1.04
PTCHD3P1-201ENST00000612350 ZBTB33Q86T24 672 aa8.56□□□□□ -1.04
PTCHD3P1-201ENST00000612350 RPAP2Q8IXW5 612 aaPredicted RBP8.56□□□□□ -1.04
PTCHD3P1-201ENST00000612350 PLPP6Q8IY26 295 aa8.56□□□□□ -1.04
PTCHD3P1-201ENST00000612350 CCDC105Q8IYK2 499 aa8.56□□□□□ -1.04
PTCHD3P1-201ENST00000612350 DCLK2Q8N568 766 aa8.56□□□□□ -1.04
PTCHD3P1-201ENST00000612350 SPPL3Q8TCT6 385 aa8.56□□□□□ -1.04
PTCHD3P1-201ENST00000612350 ATP8B4Q8TF62 1192 aa8.56□□□□□ -1.04
PTCHD3P1-201ENST00000612350 PLVAPQ9BX97 442 aa8.56□□□□□ -1.04
PTCHD3P1-201ENST00000612350 IFIH1Q9BYX4 1025 aaKnown RBP8.56□□□□□ -1.04
PTCHD3P1-201ENST00000612350 S1PR5Q9H228 398 aa8.56□□□□□ -1.04
PTCHD3P1-201ENST00000612350 RC3H2Q9HBD1 1191 aaKnown RBP8.56□□□□□ -1.04
PTCHD3P1-201ENST00000612350 SORCS3Q9UPU3 1222 aa8.56□□□□□ -1.04
PTCHD3P1-201ENST00000612350 RWDD3Q9Y3V2 267 aa8.56□□□□□ -1.04
PTCHD3P1-201ENST00000612350 DMXL1Q9Y485 3027 aa8.56□□□□□ -1.04
PTCHD3P1-201ENST00000612350 ZNF532Q9HCE3 1301 aa8.55□□□□□ -1.04
PTCHD3P1-201ENST00000612350 VPS13AQ96RL7 3174 aa8.55□□□□□ -1.04
PTCHD3P1-201ENST00000612350 FANCMQ8IYD8 2048 aa8.55□□□□□ -1.04
PTCHD3P1-201ENST00000612350 IGKV6D-41A0A0C4DH26 115 aa8.55□□□□□ -1.04
PTCHD3P1-201ENST00000612350 RSPH10B2B2RC85 870 aa8.55□□□□□ -1.04
PTCHD3P1-201ENST00000612350 MMP3P08254 477 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms