RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 FCHSD1Q86WN1 690 aa15.4■□□□□ 0.06
CTSA-213ENST00000606782 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.4■□□□□ 0.06
CTSA-213ENST00000606782 SRBD1Q8N5C6 995 aaKnown RBP15.4■□□□□ 0.06
CTSA-213ENST00000606782 RETREG2Q8NC44 543 aa15.4■□□□□ 0.06
CTSA-213ENST00000606782 PPP1R13LQ8WUF5 828 aa15.4■□□□□ 0.06
CTSA-213ENST00000606782 RRP36Q96EU6 259 aaKnown RBP15.4■□□□□ 0.06
CTSA-213ENST00000606782 IL17RAQ96F46 866 aa15.4■□□□□ 0.06
CTSA-213ENST00000606782 INPP4AQ96PE3 977 aaPredicted RBP15.4■□□□□ 0.06
CTSA-213ENST00000606782 MYL10Q9BUA6 226 aa15.4■□□□□ 0.06
CTSA-213ENST00000606782 KATNAL1Q9BW62 490 aa15.4■□□□□ 0.06
CTSA-213ENST00000606782 GTF2IRD1Q9UHL9 959 aa15.4■□□□□ 0.06
CTSA-213ENST00000606782 MSRAQ9UJ68 235 aa15.4■□□□□ 0.06
CTSA-213ENST00000606782 SLC4A7Q9Y6M7 1214 aa15.4■□□□□ 0.06
CTSA-213ENST00000606782 CHD9Q3L8U1 2897 aa15.4■□□□□ 0.06
CTSA-213ENST00000606782 TET1Q8NFU7 2136 aa15.4■□□□□ 0.06
CTSA-213ENST00000606782 SCN5AQ14524 2016 aa15.39■□□□□ 0.05
CTSA-213ENST00000606782 TTC28Q96AY4 2481 aa15.39■□□□□ 0.05
CTSA-213ENST00000606782 TRIP12Q14669 1992 aaPredicted RBP15.39■□□□□ 0.05
CTSA-213ENST00000606782 CALM1P0DP23 149 aa15.39■□□□□ 0.05
CTSA-213ENST00000606782 CALM2P0DP24 149 aa15.39■□□□□ 0.05
CTSA-213ENST00000606782 CALM3P0DP25 149 aa15.39■□□□□ 0.05
CTSA-213ENST00000606782 UBA1P22314 1058 aaKnown RBP15.39■□□□□ 0.05
CTSA-213ENST00000606782 PSEN2P49810 448 aa15.39■□□□□ 0.05
CTSA-213ENST00000606782 MRPS9P82933 396 aaKnown RBP15.39■□□□□ 0.05
CTSA-213ENST00000606782 HSDL1Q3SXM5 330 aa15.39■□□□□ 0.05
CTSA-213ENST00000606782 XRRA1Q6P2D8 792 aa15.39■□□□□ 0.05
CTSA-213ENST00000606782 AFAP1L1Q8TED9 768 aa15.39■□□□□ 0.05
CTSA-213ENST00000606782 HDAC6Q9UBN7 1215 aa15.39■□□□□ 0.05
CTSA-213ENST00000606782 NOD1Q9Y239 953 aa15.39■□□□□ 0.05
CTSA-213ENST00000606782 PCDHA11Q9Y5I1 949 aa15.39■□□□□ 0.05
CTSA-213ENST00000606782 CCDC69A6NI79 296 aa15.38■□□□□ 0.05
CTSA-213ENST00000606782 SPATA31C2B4DYI2 1134 aa15.38■□□□□ 0.05
CTSA-213ENST00000606782 MEIS2O14770 477 aa15.38■□□□□ 0.05
CTSA-213ENST00000606782 PLEKHA8P1O95397 391 aa15.38■□□□□ 0.05
CTSA-213ENST00000606782 PARNO95453 639 aaKnown RBP15.38■□□□□ 0.05
CTSA-213ENST00000606782 GGPS1O95749 300 aa15.38■□□□□ 0.05
CTSA-213ENST00000606782 ANAPC15P60006 121 aa15.38■□□□□ 0.05
CTSA-213ENST00000606782 MFSD10Q14728 455 aa15.38■□□□□ 0.05
CTSA-213ENST00000606782 GPNMBQ14956 572 aa15.38■□□□□ 0.05
CTSA-213ENST00000606782 KIAA0753Q2KHM9 967 aa15.38■□□□□ 0.05
CTSA-213ENST00000606782 ADCK5Q3MIX3 580 aa15.38■□□□□ 0.05
CTSA-213ENST00000606782 GNPTABQ3T906 1256 aa15.38■□□□□ 0.05
CTSA-213ENST00000606782 DEFB128Q7Z7B8 93 aa15.38■□□□□ 0.05
CTSA-213ENST00000606782 CCDC155Q8N6L0 562 aa15.38■□□□□ 0.05
CTSA-213ENST00000606782 C7orf31Q8N865 590 aa15.38■□□□□ 0.05
CTSA-213ENST00000606782 PHOSPHO2Q8TCD6 241 aa15.38■□□□□ 0.05
CTSA-213ENST00000606782 DHX38Q92620 1227 aaKnown RBP15.38■□□□□ 0.05
CTSA-213ENST00000606782 GPKOWQ92917 476 aaPredicted RBP eCLIP15.38■□□□□ 0.05
CTSA-213ENST00000606782 SPATA33Q96N06 139 aa15.38■□□□□ 0.05
CTSA-213ENST00000606782 NEK1Q96PY6 1258 aa15.38■□□□□ 0.05
CTSA-213ENST00000606782 C16orf70Q9BSU1 422 aa15.38■□□□□ 0.05
CTSA-213ENST00000606782 YBX2Q9Y2T7 364 aaKnown RBP15.38■□□□□ 0.05
CTSA-213ENST00000606782 TANC1Q9C0D5 1861 aa15.37■□□□□ 0.05
CTSA-213ENST00000606782 ACTN1P12814 892 aa15.37■□□□□ 0.05
CTSA-213ENST00000606782 SELPP16109 830 aa15.37■□□□□ 0.05
CTSA-213ENST00000606782 ATP2A2P16615 1042 aaKnown RBP15.37■□□□□ 0.05
CTSA-213ENST00000606782 HOXC8P31273 242 aa15.37■□□□□ 0.05
CTSA-213ENST00000606782 RBM25P49756 843 aaKnown RBP15.37■□□□□ 0.05
CTSA-213ENST00000606782 EXOSC10Q01780 885 aaKnown RBP15.37■□□□□ 0.05
CTSA-213ENST00000606782 SEMA3FQ13275 785 aa15.37■□□□□ 0.05
CTSA-213ENST00000606782 PTK7Q13308 1070 aa15.37■□□□□ 0.05
CTSA-213ENST00000606782 PCNX4Q63HM2 1172 aa15.37■□□□□ 0.05
CTSA-213ENST00000606782 USP17L6PQ6QN14 398 aa15.37■□□□□ 0.05
CTSA-213ENST00000606782 NFXL1Q6ZNB6 911 aa15.37■□□□□ 0.05
CTSA-213ENST00000606782 FANCBQ8NB91 859 aa15.37■□□□□ 0.05
CTSA-213ENST00000606782 SENP7Q9BQF6 1050 aa15.37■□□□□ 0.05
CTSA-213ENST00000606782 C22orf23Q9BZE7 217 aa15.37■□□□□ 0.05
CTSA-213ENST00000606782 TM6SF1Q9BZW5 370 aa15.37■□□□□ 0.05
CTSA-213ENST00000606782 SLC28A3Q9HAS3 691 aa15.37■□□□□ 0.05
CTSA-213ENST00000606782 SEC63Q9UGP8 760 aaKnown RBP15.37■□□□□ 0.05
CTSA-213ENST00000606782 SLC12A7Q9Y666 1083 aa15.37■□□□□ 0.05
CTSA-213ENST00000606782 GBF1Q92538 1859 aa15.36■□□□□ 0.05
CTSA-213ENST00000606782 FIBPO43427 364 aa15.36■□□□□ 0.05
CTSA-213ENST00000606782 BAIAP3O94812 1187 aa15.36■□□□□ 0.05
CTSA-213ENST00000606782 CXCL10P02778 98 aa15.36■□□□□ 0.05
CTSA-213ENST00000606782 ZNF286BP0CG31 522 aa15.36■□□□□ 0.05
CTSA-213ENST00000606782 PSMA5P28066 241 aa15.36■□□□□ 0.05
CTSA-213ENST00000606782 NEDD9Q14511 834 aa15.36■□□□□ 0.05
CTSA-213ENST00000606782 TRIM71Q2Q1W2 868 aaKnown RBP15.36■□□□□ 0.05
CTSA-213ENST00000606782 TMTC3Q6ZXV5 915 aa15.36■□□□□ 0.05
CTSA-213ENST00000606782 TEX2Q8IWB9 1127 aa15.36■□□□□ 0.05
CTSA-213ENST00000606782 SMARCC2Q8TAQ2 1214 aa15.36■□□□□ 0.05
CTSA-213ENST00000606782 PIBF1Q8WXW3 757 aa15.36■□□□□ 0.05
CTSA-213ENST00000606782 CUL5Q93034 780 aa15.36■□□□□ 0.05
CTSA-213ENST00000606782 ZFP91Q96JP5 570 aaPredicted RBP15.36■□□□□ 0.05
CTSA-213ENST00000606782 SLC9A7Q96T83 725 aa15.36■□□□□ 0.05
CTSA-213ENST00000606782 ALG1Q9BT22 464 aa15.36■□□□□ 0.05
CTSA-213ENST00000606782 NKX2-4Q9H2Z4 354 aa15.36■□□□□ 0.05
CTSA-213ENST00000606782 BCAS3Q9H6U6 928 aa15.36■□□□□ 0.05
CTSA-213ENST00000606782 MLXIPQ9HAP2 919 aa15.36■□□□□ 0.05
CTSA-213ENST00000606782 UNC80Q8N2C7 3258 aa15.35■□□□□ 0.05
CTSA-213ENST00000606782 ZBBXA8MT70 800 aa15.35■□□□□ 0.05
CTSA-213ENST00000606782 HMGB1P09429 215 aaKnown RBP15.35■□□□□ 0.05
CTSA-213ENST00000606782 CKBP12277 381 aa15.35■□□□□ 0.05
CTSA-213ENST00000606782 RABGGTBP53611 331 aa15.35■□□□□ 0.05
CTSA-213ENST00000606782 CHMP4BP1P59074 171 aa15.35■□□□□ 0.05
CTSA-213ENST00000606782 HIC1Q14526 733 aa15.35■□□□□ 0.05
CTSA-213ENST00000606782 TRAF7Q6Q0C0 670 aa15.35■□□□□ 0.05
CTSA-213ENST00000606782 METTL7BQ6UX53 244 aa15.35■□□□□ 0.05
CTSA-213ENST00000606782 LRRC8DQ7L1W4 858 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms