RNA–Protein interactions for RNA: ENST00000604423.1

SRGAP2-211, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 1 (best)

Gene SRGAP2, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-211ENST00000604423 CYFIP2Q96F07 1278 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 ATP6V1G3Q96LB4 118 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 DNAJC7Q99615 494 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 MYL10Q9BUA6 226 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 PPANQ9NQ55 473 aaKnown RBP7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 STRN4Q9NRL3 753 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 HAUS2Q9NVX0 235 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 DDX20Q9UHI6 824 aaKnown RBP7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 KCNJ14Q9UNX9 436 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 TFR2Q9UP52 801 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 IQSEC3Q9UPP2 1182 aaPredicted RBP7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 BCL9LQ86UU0 1499 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 A0A1W2PQC6 194 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 TRIM75PA6NK02 468 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 LGALS16A8MUM7 142 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 B4E1Z4 1266 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 COBLO75128 1261 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 CLSTN1O94985 981 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 STAU1O95793 577 aaKnown RBP7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 RPSAP08865 295 aaKnown RBP7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 CASP1P29466 404 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 SLC8A3P57103 927 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 MAP2K1Q02750 393 aaPredicted RBP7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 EZH2Q15910 746 aaKnown RBP7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 NBPF9Q3BBW0 867 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 GLE1Q53GS7 698 aaKnown RBP7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 AP1ARQ63HQ0 302 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 CYB5R4Q7L1T6 521 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 ARMC9Q7Z3E5 817 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 ZNF572Q7Z3I7 529 aaPredicted RBP7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 CYP2U1Q7Z449 544 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 FUKQ8N0W3 1084 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 CCDC155Q8N6L0 562 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 MB21D1Q8N884 522 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 C3orf20Q8ND61 904 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 FERMT2Q96AC1 680 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 NUP58Q9BVL2 599 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 NHEJ1Q9H9Q4 299 aaPredicted RBP7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 DMGDHQ9UI17 866 aaKnown RBP7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 CAPN11Q9UMQ6 739 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 DOLKQ9UPQ8 538 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 UBR1Q8IWV7 1749 aa7.12□□□□□ -1.27
SRGAP2-211ENST00000604423 RNF225M0QZC1 329 aaPredicted RBP7.12□□□□□ -1.27
SRGAP2-211ENST00000604423 IFIT3O14879 490 aaKnown RBP7.12□□□□□ -1.27
SRGAP2-211ENST00000604423 RAD21O60216 631 aa7.12□□□□□ -1.27
SRGAP2-211ENST00000604423 DEXIO95424 95 aa7.12□□□□□ -1.27
SRGAP2-211ENST00000604423 EEF1GP26641 437 aaKnown RBP7.12□□□□□ -1.27
SRGAP2-211ENST00000604423 SEC24CP53992 1094 aa7.12□□□□□ -1.27
SRGAP2-211ENST00000604423 PPARAQ07869 468 aa7.12□□□□□ -1.27
SRGAP2-211ENST00000604423 NTRK3Q16288 839 aa7.12□□□□□ -1.27
SRGAP2-211ENST00000604423 RTN1Q16799 776 aa7.12□□□□□ -1.27
SRGAP2-211ENST00000604423 ANKRD20A8PQ5CZ79 823 aa7.12□□□□□ -1.27
SRGAP2-211ENST00000604423 FKBP15Q5T1M5 1219 aa7.12□□□□□ -1.27
SRGAP2-211ENST00000604423 HAUS3Q68CZ6 603 aa7.12□□□□□ -1.27
SRGAP2-211ENST00000604423 RCSD1Q6JBY9 416 aa7.12□□□□□ -1.27
SRGAP2-211ENST00000604423 USP49Q70CQ1 688 aa7.12□□□□□ -1.27
SRGAP2-211ENST00000604423 TAX1BP1Q86VP1 789 aa7.12□□□□□ -1.27
SRGAP2-211ENST00000604423 CREG2Q8IUH2 290 aa7.12□□□□□ -1.27
SRGAP2-211ENST00000604423 DHX37Q8IY37 1157 aaKnown RBP7.12□□□□□ -1.27
SRGAP2-211ENST00000604423 CACNA2D3Q8IZS8 1091 aa7.12□□□□□ -1.27
SRGAP2-211ENST00000604423 HDAC7Q8WUI4 952 aa7.12□□□□□ -1.27
SRGAP2-211ENST00000604423 IFT81Q8WYA0 676 aa7.12□□□□□ -1.27
SRGAP2-211ENST00000604423 IP6K1Q92551 441 aa7.12□□□□□ -1.27
SRGAP2-211ENST00000604423 P3H4Q92791 437 aa7.12□□□□□ -1.27
SRGAP2-211ENST00000604423 CCDC42Q96M95 316 aa7.12□□□□□ -1.27
SRGAP2-211ENST00000604423 OSBPL9Q96SU4 736 aa7.12□□□□□ -1.27
SRGAP2-211ENST00000604423 CABP5Q9NP86 173 aa7.12□□□□□ -1.27
SRGAP2-211ENST00000604423 BATF3Q9NR55 127 aa7.12□□□□□ -1.27
SRGAP2-211ENST00000604423 TPX2Q9ULW0 747 aaKnown RBP7.12□□□□□ -1.27
SRGAP2-211ENST00000604423 RIPOR2Q9Y4F9 1068 aa7.12□□□□□ -1.27
SRGAP2-211ENST00000604423 PDS5AQ29RF7 1337 aaKnown RBP7.12□□□□□ -1.27
SRGAP2-211ENST00000604423 ADAMTS13Q76LX8 1427 aa7.12□□□□□ -1.27
SRGAP2-211ENST00000604423 ERICH2A1L162 156 aa7.11□□□□□ -1.27
SRGAP2-211ENST00000604423 LRRC10BA6NIK2 292 aa7.11□□□□□ -1.27
SRGAP2-211ENST00000604423 H7C1D1 291 aa7.11□□□□□ -1.27
SRGAP2-211ENST00000604423 GCOM1H8Y6P7 765 aaPredicted RBP7.11□□□□□ -1.27
SRGAP2-211ENST00000604423 PTCD1O75127 700 aaKnown RBP7.11□□□□□ -1.27
SRGAP2-211ENST00000604423 ATP2C2O75185 946 aa7.11□□□□□ -1.27
SRGAP2-211ENST00000604423 MYCP01106 439 aaPredicted RBP7.11□□□□□ -1.27
SRGAP2-211ENST00000604423 A1BGP04217 495 aa7.11□□□□□ -1.27
SRGAP2-211ENST00000604423 PARP1P09874 1014 aaKnown RBP7.11□□□□□ -1.27
SRGAP2-211ENST00000604423 MYZAPP0CAP1 466 aa7.11□□□□□ -1.27
SRGAP2-211ENST00000604423 PRLRP16471 622 aa7.11□□□□□ -1.27
SRGAP2-211ENST00000604423 IFNAR1P17181 557 aa7.11□□□□□ -1.27
SRGAP2-211ENST00000604423 DNM2P50570 870 aa7.11□□□□□ -1.27
SRGAP2-211ENST00000604423 MRPS25P82663 173 aaKnown RBP7.11□□□□□ -1.27
SRGAP2-211ENST00000604423 MEA1Q16626 185 aa7.11□□□□□ -1.27
SRGAP2-211ENST00000604423 C11orf91Q3C1V1 193 aa7.11□□□□□ -1.27
SRGAP2-211ENST00000604423 ODF2Q5BJF6 829 aa7.11□□□□□ -1.27
SRGAP2-211ENST00000604423 ZNF658Q5TYW1 1059 aaPredicted RBP7.11□□□□□ -1.27
SRGAP2-211ENST00000604423 PPP4R3AQ6IN85 833 aa7.11□□□□□ -1.27
SRGAP2-211ENST00000604423 LYSMD3Q7Z3D4 306 aa7.11□□□□□ -1.27
SRGAP2-211ENST00000604423 TBC1D10CQ8IV04 446 aa7.11□□□□□ -1.27
SRGAP2-211ENST00000604423 HOOK2Q96ED9 719 aa7.11□□□□□ -1.27
SRGAP2-211ENST00000604423 EPSTI1Q96J88 318 aa7.11□□□□□ -1.27
SRGAP2-211ENST00000604423 PSMB7Q99436 277 aa7.11□□□□□ -1.27
SRGAP2-211ENST00000604423 IFIH1Q9BYX4 1025 aaKnown RBP7.11□□□□□ -1.27
SRGAP2-211ENST00000604423 LACRTQ9GZZ8 138 aa7.11□□□□□ -1.27
SRGAP2-211ENST00000604423 BLZF1Q9H2G9 400 aa7.11□□□□□ -1.27
SRGAP2-211ENST00000604423 LY9Q9HBG7 655 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms