RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 CCZ1P86791 482 aaPredicted RBP5.22□□□□□ -1.57
LINC01109-201ENST00000603837 PDE4BQ07343 736 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 DMPKQ09013 629 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 CUL3Q13618 768 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 MIS18BP1Q6P0N0 1132 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 DSTYKQ6XUX3 929 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 HOMER1Q86YM7 354 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 RNF135Q8IUD6 432 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 PPM1NQ8N819 430 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 TRIM58Q8NG06 486 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 ITPKCQ96DU7 683 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 HOOK2Q96ED9 719 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 RUFY1Q96T51 708 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 GORASP1Q9BQQ3 440 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 CSRNP2Q9H175 543 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 TAOK3Q9H2K8 898 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 PAPOLBQ9NRJ5 636 aaKnown RBP5.22□□□□□ -1.57
LINC01109-201ENST00000603837 MIS18AQ9NYP9 233 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 TNNQ9UQP3 1299 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 TRIM17Q9Y577 477 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 MAFBQ9Y5Q3 323 aaPredicted RBP5.22□□□□□ -1.57
LINC01109-201ENST00000603837 PHLPP2Q6ZVD8 1323 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 ARPC4-TTLL3A0A0A6YYG9 625 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 ZIC2O95409 532 aaPredicted RBP5.22□□□□□ -1.57
LINC01109-201ENST00000603837 HSPA1AP0DMV8 641 aaKnown RBP5.22□□□□□ -1.57
LINC01109-201ENST00000603837 HSPA1BP0DMV9 641 aaKnown RBP5.22□□□□□ -1.57
LINC01109-201ENST00000603837 SYT1P21579 422 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 SLC8A1P32418 973 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 SARSP49591 514 aaKnown RBP5.22□□□□□ -1.57
LINC01109-201ENST00000603837 SMTNP53814 917 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 NLRP12P59046 1061 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 CHMP4BP1P59074 171 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 GUCY1B3Q02153 619 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 TMEM62Q0P6H9 643 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 BNIP1Q12981 228 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 G3BP1Q13283 466 aaKnown RBP eCLIP5.22□□□□□ -1.57
LINC01109-201ENST00000603837 SMUG1Q53HV7 270 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 WDR45BQ5MNZ6 344 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 CCDC129Q6ZRS4 1044 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 HOOK3Q86VS8 718 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 SYCP3Q8IZU3 236 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 ABTB2Q8N961 1025 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 SYTL4Q96C24 671 aaPredicted RBP5.22□□□□□ -1.57
LINC01109-201ENST00000603837 DTNBP1Q96EV8 351 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 RBM18Q96H35 190 aaKnown RBP5.22□□□□□ -1.57
LINC01109-201ENST00000603837 PPP1R13BQ96KQ4 1090 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 TSC22D3Q99576 134 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 CCDC68Q9H2F9 335 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 PGPEP1Q9NXJ5 209 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 HDAC6Q9UBN7 1215 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 PARP2Q9UGN5 583 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 ATXN2Q99700 1313 aaKnown RBP5.21□□□□□ -1.57
LINC01109-201ENST00000603837 C2orf81A6NN90 581 aa5.21□□□□□ -1.58
LINC01109-201ENST00000603837 AXIN1O15169 862 aa5.21□□□□□ -1.58
LINC01109-201ENST00000603837 CAPN5O15484 640 aaPredicted RBP5.21□□□□□ -1.58
LINC01109-201ENST00000603837 CDC45O75419 566 aa5.21□□□□□ -1.58
LINC01109-201ENST00000603837 ERLIN1O75477 346 aa5.21□□□□□ -1.58
LINC01109-201ENST00000603837 P4HBP07237 508 aaKnown RBP5.21□□□□□ -1.58
LINC01109-201ENST00000603837 CCDC159P0C7I6 412 aa5.21□□□□□ -1.58
LINC01109-201ENST00000603837 GNAT1P11488 350 aa5.21□□□□□ -1.58
LINC01109-201ENST00000603837 TIMP2P16035 220 aa5.21□□□□□ -1.58
LINC01109-201ENST00000603837 BTF3P20290 206 aaKnown RBP5.21□□□□□ -1.58
LINC01109-201ENST00000603837 TMOD1P28289 359 aa5.21□□□□□ -1.58
LINC01109-201ENST00000603837 CNGA1P29973 690 aa5.21□□□□□ -1.58
LINC01109-201ENST00000603837 SKIV2L2P42285 1042 aaKnown RBP5.21□□□□□ -1.58
LINC01109-201ENST00000603837 ARHGAP25P42331 645 aa5.21□□□□□ -1.58
LINC01109-201ENST00000603837 ARID5AQ03989 594 aa5.21□□□□□ -1.58
LINC01109-201ENST00000603837 MCL1Q07820 350 aa5.21□□□□□ -1.58
LINC01109-201ENST00000603837 CTC1Q2NKJ3 1217 aa5.21□□□□□ -1.58
LINC01109-201ENST00000603837 ALFQ53S48 1182 aa5.21□□□□□ -1.58
LINC01109-201ENST00000603837 RNF168Q8IYW5 571 aaPredicted RBP5.21□□□□□ -1.58
LINC01109-201ENST00000603837 CARNMT1Q8N4J0 409 aa5.21□□□□□ -1.58
LINC01109-201ENST00000603837 SPATA5Q8NB90 893 aa5.21□□□□□ -1.58
LINC01109-201ENST00000603837 TNIP2Q8NFZ5 429 aa5.21□□□□□ -1.58
LINC01109-201ENST00000603837 MAGEC3Q8TD91 643 aa5.21□□□□□ -1.58
LINC01109-201ENST00000603837 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.21□□□□□ -1.58
LINC01109-201ENST00000603837 CUL5Q93034 780 aa5.21□□□□□ -1.58
LINC01109-201ENST00000603837 KLF16Q9BXK1 252 aaPredicted RBP5.21□□□□□ -1.58
LINC01109-201ENST00000603837 CCDC8Q9H0W5 538 aaPredicted RBP5.21□□□□□ -1.58
LINC01109-201ENST00000603837 CBX8Q9HC52 389 aa5.21□□□□□ -1.58
LINC01109-201ENST00000603837 TMPRSS4Q9NRS4 437 aa5.21□□□□□ -1.58
LINC01109-201ENST00000603837 ZNHIT6Q9NWK9 470 aaKnown RBP5.21□□□□□ -1.58
LINC01109-201ENST00000603837 FNIP2Q9P278 1114 aa5.21□□□□□ -1.58
LINC01109-201ENST00000603837 FBXO10Q9UK96 956 aa5.21□□□□□ -1.58
LINC01109-201ENST00000603837 TMX2Q9Y320 296 aa5.21□□□□□ -1.58
LINC01109-201ENST00000603837 EFCAB6Q5THR3 1501 aa5.21□□□□□ -1.58
LINC01109-201ENST00000603837 DIP2AQ14689 1571 aa5.21□□□□□ -1.58
LINC01109-201ENST00000603837 PIK3C2BO00750 1634 aa5.21□□□□□ -1.58
LINC01109-201ENST00000603837 SMNDC1O75940 238 aaKnown RBP eCLIP5.21□□□□□ -1.58
LINC01109-201ENST00000603837 PARP1P09874 1014 aaKnown RBP5.21□□□□□ -1.58
LINC01109-201ENST00000603837 PDHBP11177 359 aa5.21□□□□□ -1.58
LINC01109-201ENST00000603837 GZMAP12544 262 aa5.21□□□□□ -1.58
LINC01109-201ENST00000603837 ITIH3Q06033 890 aa5.21□□□□□ -1.58
LINC01109-201ENST00000603837 AIMP1Q12904 312 aaKnown RBP5.21□□□□□ -1.58
LINC01109-201ENST00000603837 TCIRG1Q13488 830 aa5.21□□□□□ -1.58
LINC01109-201ENST00000603837 MVPQ14764 893 aaKnown RBP5.21□□□□□ -1.58
LINC01109-201ENST00000603837 PLCB4Q15147 1175 aa5.21□□□□□ -1.58
LINC01109-201ENST00000603837 RASA2Q15283 850 aa5.21□□□□□ -1.58
LINC01109-201ENST00000603837 CCDC40Q4G0X9 1142 aa5.21□□□□□ -1.58
LINC01109-201ENST00000603837 TRIM68Q6AZZ1 485 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms