RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 MFSD10Q14728 455 aa18.86■□□□□ 0.61
TUBE1-206ENST00000603722 TSGA10IPQ3SY00 556 aa18.86■□□□□ 0.61
TUBE1-206ENST00000603722 HEATR3Q7Z4Q2 680 aa18.86■□□□□ 0.61
TUBE1-206ENST00000603722 DEFB128Q7Z7B8 93 aa18.86■□□□□ 0.61
TUBE1-206ENST00000603722 SESTD1Q86VW0 696 aa18.86■□□□□ 0.61
TUBE1-206ENST00000603722 C7orf31Q8N865 590 aa18.86■□□□□ 0.61
TUBE1-206ENST00000603722 RETREG2Q8NC44 543 aa18.86■□□□□ 0.61
TUBE1-206ENST00000603722 SLC17A8Q8NDX2 589 aa18.86■□□□□ 0.61
TUBE1-206ENST00000603722 TIFAQ96CG3 184 aa18.86■□□□□ 0.61
TUBE1-206ENST00000603722 VWCEQ96DN2 955 aa18.86■□□□□ 0.61
TUBE1-206ENST00000603722 INPP4AQ96PE3 977 aaPredicted RBP18.86■□□□□ 0.61
TUBE1-206ENST00000603722 PBX4Q9BYU1 374 aa18.86■□□□□ 0.61
TUBE1-206ENST00000603722 MLXIPQ9HAP2 919 aa18.86■□□□□ 0.61
TUBE1-206ENST00000603722 RTEL1Q9NZ71 1219 aa18.86■□□□□ 0.61
TUBE1-206ENST00000603722 BRPF3Q9ULD4 1205 aa18.86■□□□□ 0.61
TUBE1-206ENST00000603722 CNTNAP5Q8WYK1 1306 aa18.85■□□□□ 0.61
TUBE1-206ENST00000603722 PITPNM1O00562 1244 aa18.85■□□□□ 0.61
TUBE1-206ENST00000603722 ZBTB43O43298 467 aa18.85■□□□□ 0.61
TUBE1-206ENST00000603722 STAM2O75886 525 aa18.85■□□□□ 0.61
TUBE1-206ENST00000603722 HOXD8P13378 290 aaPredicted RBP18.85■□□□□ 0.61
TUBE1-206ENST00000603722 BFSP2Q13515 415 aa18.85■□□□□ 0.61
TUBE1-206ENST00000603722 RTN1Q16799 776 aa18.85■□□□□ 0.61
TUBE1-206ENST00000603722 KIAA0753Q2KHM9 967 aa18.85■□□□□ 0.61
TUBE1-206ENST00000603722 MYLIPQ8WY64 445 aa18.85■□□□□ 0.61
TUBE1-206ENST00000603722 CTAGE1Q96RT6 745 aa18.85■□□□□ 0.61
TUBE1-206ENST00000603722 PSTPIP2Q9H939 334 aa18.85■□□□□ 0.61
TUBE1-206ENST00000603722 RBM28Q9NW13 759 aaKnown RBP18.85■□□□□ 0.61
TUBE1-206ENST00000603722 HDAC6Q9UBN7 1215 aa18.85■□□□□ 0.61
TUBE1-206ENST00000603722 GTF2IRD1Q9UHL9 959 aa18.85■□□□□ 0.61
TUBE1-206ENST00000603722 KLF18A0A0U1RQI7 1052 aa18.84■□□□□ 0.61
TUBE1-206ENST00000603722 ZBBXA8MT70 800 aa18.84■□□□□ 0.61
TUBE1-206ENST00000603722 FIBPO43427 364 aa18.84■□□□□ 0.61
TUBE1-206ENST00000603722 PPFIA4O75335 1185 aa18.84■□□□□ 0.61
TUBE1-206ENST00000603722 PFKMP08237 780 aa18.84■□□□□ 0.61
TUBE1-206ENST00000603722 IQCF3P0C7M6 154 aa18.84■□□□□ 0.61
TUBE1-206ENST00000603722 SEMA3FQ13275 785 aa18.84■□□□□ 0.61
TUBE1-206ENST00000603722 UBE2SQ16763 222 aa18.84■□□□□ 0.61
TUBE1-206ENST00000603722 PCNX4Q63HM2 1172 aa18.84■□□□□ 0.61
TUBE1-206ENST00000603722 CCDC155Q8N6L0 562 aa18.84■□□□□ 0.61
TUBE1-206ENST00000603722 BCAS3Q9H6U6 928 aa18.84■□□□□ 0.61
TUBE1-206ENST00000603722 GOLGA8AA7E2F4 631 aa18.83■□□□□ 0.6
TUBE1-206ENST00000603722 GOLGA8BA8MQT2 603 aa18.83■□□□□ 0.6
TUBE1-206ENST00000603722 SPATA31C2B4DYI2 1134 aa18.83■□□□□ 0.6
TUBE1-206ENST00000603722 HAS3O00219 553 aa18.83■□□□□ 0.6
TUBE1-206ENST00000603722 NEFLP07196 543 aa18.83■□□□□ 0.6
TUBE1-206ENST00000603722 HMGB1P09429 215 aaKnown RBP18.83■□□□□ 0.6
TUBE1-206ENST00000603722 CPA1P15085 419 aa18.83■□□□□ 0.6
TUBE1-206ENST00000603722 ICAM3P32942 547 aa18.83■□□□□ 0.6
TUBE1-206ENST00000603722 RFC2P35250 354 aa18.83■□□□□ 0.6
TUBE1-206ENST00000603722 CAGE1Q8TC20 777 aa18.83■□□□□ 0.6
TUBE1-206ENST00000603722 DHX38Q92620 1227 aaKnown RBP18.83■□□□□ 0.6
TUBE1-206ENST00000603722 NAP1L2Q9ULW6 460 aaPredicted RBP18.83■□□□□ 0.6
TUBE1-206ENST00000603722 SCN10AQ9Y5Y9 1956 aa18.82■□□□□ 0.6
TUBE1-206ENST00000603722 NOP56O00567 594 aaKnown RBP18.82■□□□□ 0.6
TUBE1-206ENST00000603722 FOSL2P15408 326 aa18.82■□□□□ 0.6
TUBE1-206ENST00000603722 FGD1P98174 961 aa18.82■□□□□ 0.6
TUBE1-206ENST00000603722 NEDD9Q14511 834 aa18.82■□□□□ 0.6
TUBE1-206ENST00000603722 GRIN2CQ14957 1233 aa18.82■□□□□ 0.6
TUBE1-206ENST00000603722 WWC2Q6AWC2 1192 aa18.82■□□□□ 0.6
TUBE1-206ENST00000603722 XRRA1Q6P2D8 792 aa18.82■□□□□ 0.6
TUBE1-206ENST00000603722 METTL7BQ6UX53 244 aa18.82■□□□□ 0.6
TUBE1-206ENST00000603722 CYFIP1Q7L576 1253 aa18.82■□□□□ 0.6
TUBE1-206ENST00000603722 AFAP1L1Q8TED9 768 aa18.82■□□□□ 0.6
TUBE1-206ENST00000603722 JAKMIP1Q96N16 626 aaKnown RBP18.82■□□□□ 0.6
TUBE1-206ENST00000603722 FTOQ9C0B1 505 aaKnown RBP eCLIP18.82■□□□□ 0.6
TUBE1-206ENST00000603722 ZNF576Q9H609 170 aa18.82■□□□□ 0.6
TUBE1-206ENST00000603722 SLC4A7Q9Y6M7 1214 aa18.82■□□□□ 0.6
TUBE1-206ENST00000603722 SPDYE3A6NKU9 549 aa18.81■□□□□ 0.6
TUBE1-206ENST00000603722 HSPA4P34932 840 aa18.81■□□□□ 0.6
TUBE1-206ENST00000603722 SP4Q02446 784 aa18.81■□□□□ 0.6
TUBE1-206ENST00000603722 FUT2Q10981 343 aa18.81■□□□□ 0.6
TUBE1-206ENST00000603722 RAB30Q15771 203 aa18.81■□□□□ 0.6
TUBE1-206ENST00000603722 LRRC8DQ7L1W4 858 aa18.81■□□□□ 0.6
TUBE1-206ENST00000603722 NLRX1Q86UT6 975 aa18.81■□□□□ 0.6
TUBE1-206ENST00000603722 KCNB2Q92953 911 aa18.81■□□□□ 0.6
TUBE1-206ENST00000603722 C16orf70Q9BSU1 422 aa18.81■□□□□ 0.6
TUBE1-206ENST00000603722 MSRAQ9UJ68 235 aa18.81■□□□□ 0.6
TUBE1-206ENST00000603722 SNX14Q9Y5W7 946 aa18.81■□□□□ 0.6
TUBE1-206ENST00000603722 EYSQ5T1H1 3165 aa18.81■□□□□ 0.6
TUBE1-206ENST00000603722 LGALS2P05162 132 aa18.8■□□□□ 0.6
TUBE1-206ENST00000603722 ACTN1P12814 892 aa18.8■□□□□ 0.6
TUBE1-206ENST00000603722 RABGGTBP53611 331 aa18.8■□□□□ 0.6
TUBE1-206ENST00000603722 NAPAP54920 295 aa18.8■□□□□ 0.6
TUBE1-206ENST00000603722 ZNF200P98182 395 aaPredicted RBP18.8■□□□□ 0.6
TUBE1-206ENST00000603722 TYW1BQ6NUM6 668 aa18.8■□□□□ 0.6
TUBE1-206ENST00000603722 MAFAQ8NHW3 353 aaPredicted RBP18.8■□□□□ 0.6
TUBE1-206ENST00000603722 GPR20Q99678 358 aa18.8■□□□□ 0.6
TUBE1-206ENST00000603722 NKX2-4Q9H2Z4 354 aa18.8■□□□□ 0.6
TUBE1-206ENST00000603722 PCDHA6Q9UN73 950 aa18.8■□□□□ 0.6
TUBE1-206ENST00000603722 YBX2Q9Y2T7 364 aaKnown RBP18.8■□□□□ 0.6
TUBE1-206ENST00000603722 TELO2Q9Y4R8 837 aa18.8■□□□□ 0.6
TUBE1-206ENST00000603722 PCDHA8Q9Y5H6 950 aa18.8■□□□□ 0.6
TUBE1-206ENST00000603722 MYH6P13533 1939 aa18.8■□□□□ 0.6
TUBE1-206ENST00000603722 REC8O95072 547 aa18.79■□□□□ 0.6
TUBE1-206ENST00000603722 CKBP12277 381 aa18.79■□□□□ 0.6
TUBE1-206ENST00000603722 SELPP16109 830 aa18.79■□□□□ 0.6
TUBE1-206ENST00000603722 ATP2A2P16615 1042 aaKnown RBP18.79■□□□□ 0.6
TUBE1-206ENST00000603722 CDC27P30260 824 aa18.79■□□□□ 0.6
TUBE1-206ENST00000603722 METAP2P50579 478 aaKnown RBP eCLIP18.79■□□□□ 0.6
TUBE1-206ENST00000603722 APOBRQ0VD83 1088 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms