RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 GGPS1O95749 300 aa24.53■■□□□ 1.52
PPFIA3-209ENST00000602783 CA3P07451 260 aa24.53■■□□□ 1.52
PPFIA3-209ENST00000602783 SELPP16109 830 aa24.53■■□□□ 1.52
PPFIA3-209ENST00000602783 CCND2P30279 289 aa24.53■■□□□ 1.52
PPFIA3-209ENST00000602783 CELF3Q5SZQ8 465 aaKnown RBP24.53■■□□□ 1.52
PPFIA3-209ENST00000602783 SPATA33Q96N06 139 aa24.53■■□□□ 1.52
PPFIA3-209ENST00000602783 HAS3O00219 553 aa24.52■■□□□ 1.52
PPFIA3-209ENST00000602783 F2P00734 622 aa24.52■■□□□ 1.52
PPFIA3-209ENST00000602783 SP2Q02086 613 aa24.52■■□□□ 1.52
PPFIA3-209ENST00000602783 GPNMBQ14956 572 aa24.52■■□□□ 1.52
PPFIA3-209ENST00000602783 HSDL1Q3SXM5 330 aa24.52■■□□□ 1.52
PPFIA3-209ENST00000602783 TJAP1Q5JTD0 557 aa24.52■■□□□ 1.52
PPFIA3-209ENST00000602783 ANO2Q9NQ90 1003 aa24.52■■□□□ 1.52
PPFIA3-209ENST00000602783 SLC27A2O14975 620 aa24.51■■□□□ 1.51
PPFIA3-209ENST00000602783 TGFB3P10600 412 aa24.51■■□□□ 1.51
PPFIA3-209ENST00000602783 LRRC8DQ7L1W4 858 aa24.51■■□□□ 1.51
PPFIA3-209ENST00000602783 GPKOWQ92917 476 aaPredicted RBP eCLIP24.51■■□□□ 1.51
PPFIA3-209ENST00000602783 MLXIPQ9HAP2 919 aa24.51■■□□□ 1.51
PPFIA3-209ENST00000602783 LY9Q9HBG7 655 aa24.51■■□□□ 1.51
PPFIA3-209ENST00000602783 TTC28Q96AY4 2481 aa24.51■■□□□ 1.51
PPFIA3-209ENST00000602783 TANC1Q9C0D5 1861 aa24.5■■□□□ 1.51
PPFIA3-209ENST00000602783 KIF28PB7ZC32 967 aa24.5■■□□□ 1.51
PPFIA3-209ENST00000602783 BAIAP3O94812 1187 aa24.5■■□□□ 1.51
PPFIA3-209ENST00000602783 CKBP12277 381 aa24.5■■□□□ 1.51
PPFIA3-209ENST00000602783 HOXD8P13378 290 aaPredicted RBP24.5■■□□□ 1.51
PPFIA3-209ENST00000602783 UBA1P22314 1058 aaKnown RBP24.5■■□□□ 1.51
PPFIA3-209ENST00000602783 RBL2Q08999 1139 aa24.5■■□□□ 1.51
PPFIA3-209ENST00000602783 CASC1Q6TDU7 716 aa24.5■■□□□ 1.51
PPFIA3-209ENST00000602783 HERC6Q8IVU3 1022 aa24.5■■□□□ 1.51
PPFIA3-209ENST00000602783 CERS4Q9HA82 394 aa24.5■■□□□ 1.51
PPFIA3-209ENST00000602783 RFXAPO00287 272 aa24.49■■□□□ 1.51
PPFIA3-209ENST00000602783 PRC1O43663 620 aa24.49■■□□□ 1.51
PPFIA3-209ENST00000602783 PARNO95453 639 aaKnown RBP24.49■■□□□ 1.51
PPFIA3-209ENST00000602783 KCNJ6P48051 423 aa24.49■■□□□ 1.51
PPFIA3-209ENST00000602783 ZNF200P98182 395 aaPredicted RBP24.49■■□□□ 1.51
PPFIA3-209ENST00000602783 PTK7Q13308 1070 aa24.49■■□□□ 1.51
PPFIA3-209ENST00000602783 CREB3L3Q68CJ9 461 aa24.49■■□□□ 1.51
PPFIA3-209ENST00000602783 ZNF654Q8IZM8 581 aa24.49■■□□□ 1.51
PPFIA3-209ENST00000602783 ATXN2LQ8WWM7 1075 aaKnown RBP24.49■■□□□ 1.51
PPFIA3-209ENST00000602783 MYL10Q9BUA6 226 aa24.49■■□□□ 1.51
PPFIA3-209ENST00000602783 THEGQ9P2T0 379 aa24.49■■□□□ 1.51
PPFIA3-209ENST00000602783 COL9A3Q14050 684 aaPredicted RBP24.48■■□□□ 1.51
PPFIA3-209ENST00000602783 NECTIN1Q15223 517 aa24.48■■□□□ 1.51
PPFIA3-209ENST00000602783 MICALL1Q8N3F8 863 aa24.48■■□□□ 1.51
PPFIA3-209ENST00000602783 CTCFLQ8NI51 663 aaPredicted RBP24.48■■□□□ 1.51
PPFIA3-209ENST00000602783 MAP3K14Q99558 947 aa24.48■■□□□ 1.51
PPFIA3-209ENST00000602783 BCAS3Q9H6U6 928 aa24.48■■□□□ 1.51
PPFIA3-209ENST00000602783 NBNO60934 754 aa24.47■■□□□ 1.51
PPFIA3-209ENST00000602783 DDAH1O94760 285 aa24.47■■□□□ 1.51
PPFIA3-209ENST00000602783 KIF5BP33176 963 aa24.47■■□□□ 1.51
PPFIA3-209ENST00000602783 MCM5P33992 734 aa24.47■■□□□ 1.51
PPFIA3-209ENST00000602783 MRPS9P82933 396 aaKnown RBP24.47■■□□□ 1.51
PPFIA3-209ENST00000602783 CNKSR3Q6P9H4 555 aa24.47■■□□□ 1.51
PPFIA3-209ENST00000602783 WNT8BQ93098 351 aa24.47■■□□□ 1.51
PPFIA3-209ENST00000602783 RRP36Q96EU6 259 aaKnown RBP24.47■■□□□ 1.51
PPFIA3-209ENST00000602783 C16orf70Q9BSU1 422 aa24.47■■□□□ 1.51
PPFIA3-209ENST00000602783 MTA3Q9BTC8 594 aa24.47■■□□□ 1.51
PPFIA3-209ENST00000602783 RTEL1Q9NZ71 1219 aa24.47■■□□□ 1.51
PPFIA3-209ENST00000602783 SPTBN5Q9NRC6 3674 aaKnown RBP24.47■■□□□ 1.51
PPFIA3-209ENST00000602783 SH2B2O14492 632 aaPredicted RBP24.46■■□□□ 1.51
PPFIA3-209ENST00000602783 TLL1O43897 1013 aa24.46■■□□□ 1.51
PPFIA3-209ENST00000602783 ARHGEF15O94989 841 aa24.46■■□□□ 1.51
PPFIA3-209ENST00000602783 CXCL10P02778 98 aa24.46■■□□□ 1.51
PPFIA3-209ENST00000602783 WDR5P61964 334 aaKnown RBP24.46■■□□□ 1.51
PPFIA3-209ENST00000602783 TAP1Q03518 808 aa24.46■■□□□ 1.51
PPFIA3-209ENST00000602783 HIC1Q14526 733 aa24.46■■□□□ 1.51
PPFIA3-209ENST00000602783 TRIM71Q2Q1W2 868 aaKnown RBP24.46■■□□□ 1.51
PPFIA3-209ENST00000602783 GNPTABQ3T906 1256 aa24.46■■□□□ 1.51
PPFIA3-209ENST00000602783 ZNF618Q5T7W0 954 aa24.46■■□□□ 1.51
PPFIA3-209ENST00000602783 NFXL1Q6ZNB6 911 aa24.46■■□□□ 1.51
PPFIA3-209ENST00000602783 SPZ1Q9BXG8 430 aa24.46■■□□□ 1.51
PPFIA3-209ENST00000602783 USP17L6PQ6QN14 398 aa24.45■■□□□ 1.5
PPFIA3-209ENST00000602783 TMTC2Q8N394 836 aa24.45■■□□□ 1.5
PPFIA3-209ENST00000602783 SMARCC2Q8TAQ2 1214 aa24.45■■□□□ 1.5
PPFIA3-209ENST00000602783 ARNTL2Q8WYA1 636 aa24.45■■□□□ 1.5
PPFIA3-209ENST00000602783 CUL5Q93034 780 aa24.45■■□□□ 1.5
PPFIA3-209ENST00000602783 TMEM87BQ96K49 555 aa24.45■■□□□ 1.5
PPFIA3-209ENST00000602783 INPP4AQ96PE3 977 aaPredicted RBP24.45■■□□□ 1.5
PPFIA3-209ENST00000602783 ASB2Q96Q27 587 aa24.45■■□□□ 1.5
PPFIA3-209ENST00000602783 FRMPD4Q14CM0 1322 aa24.44■■□□□ 1.5
PPFIA3-209ENST00000602783 EPOPA6NHQ4 379 aa24.44■■□□□ 1.5
PPFIA3-209ENST00000602783 CCDC69A6NI79 296 aa24.44■■□□□ 1.5
PPFIA3-209ENST00000602783 H3BRB1 525 aa24.44■■□□□ 1.5
PPFIA3-209ENST00000602783 NOP56O00567 594 aaKnown RBP24.44■■□□□ 1.5
PPFIA3-209ENST00000602783 CDC45O75419 566 aa24.44■■□□□ 1.5
PPFIA3-209ENST00000602783 STAM2O75886 525 aa24.44■■□□□ 1.5
PPFIA3-209ENST00000602783 SMARCA1P28370 1054 aa24.44■■□□□ 1.5
PPFIA3-209ENST00000602783 ICAM3P32942 547 aa24.44■■□□□ 1.5
PPFIA3-209ENST00000602783 MRPS5P82675 430 aaKnown RBP24.44■■□□□ 1.5
PPFIA3-209ENST00000602783 TCTN1Q2MV58 587 aa24.44■■□□□ 1.5
PPFIA3-209ENST00000602783 TRAF7Q6Q0C0 670 aa24.44■■□□□ 1.5
PPFIA3-209ENST00000602783 TMCO2Q7Z6W1 182 aaPredicted RBP24.44■■□□□ 1.5
PPFIA3-209ENST00000602783 LZTS2Q9BRK4 669 aa24.44■■□□□ 1.5
PPFIA3-209ENST00000602783 ZBED2Q9BTP6 218 aa24.44■■□□□ 1.5
PPFIA3-209ENST00000602783 TSPYL2Q9H2G4 693 aaPredicted RBP24.44■■□□□ 1.5
PPFIA3-209ENST00000602783 TUT1Q9H6E5 874 aaKnown RBP24.44■■□□□ 1.5
PPFIA3-209ENST00000602783 SEC63Q9UGP8 760 aaKnown RBP24.44■■□□□ 1.5
PPFIA3-209ENST00000602783 ABHD14A-ACY1A0A1B0GW23 586 aa24.43■■□□□ 1.5
PPFIA3-209ENST00000602783 C17orf102A2RUQ5 167 aa24.43■■□□□ 1.5
PPFIA3-209ENST00000602783 SPATA31C2B4DYI2 1134 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms