RNA–Protein interactions for RNA: ENST00000602260.5

ZNF544-219, Transcript of zinc finger protein 544, humanhuman

TSL 4

Gene ZNF544, Length 552 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-219ENST00000602260 RBM28Q9NW13 759 aaKnown RBP13.3□□□□□ -0.28
ZNF544-219ENST00000602260 TRANK1O15050 2925 aa13.3□□□□□ -0.28
ZNF544-219ENST00000602260 MYH6P13533 1939 aa13.29□□□□□ -0.28
ZNF544-219ENST00000602260 KLF18A0A0U1RQI7 1052 aa13.29□□□□□ -0.28
ZNF544-219ENST00000602260 MEIS2O14770 477 aa13.29□□□□□ -0.28
ZNF544-219ENST00000602260 MMP3P08254 477 aa13.29□□□□□ -0.28
ZNF544-219ENST00000602260 TGFB3P10600 412 aa13.29□□□□□ -0.28
ZNF544-219ENST00000602260 CPA1P15085 419 aa13.29□□□□□ -0.28
ZNF544-219ENST00000602260 PBX2P40425 430 aa13.29□□□□□ -0.28
ZNF544-219ENST00000602260 FUT2Q10981 343 aa13.29□□□□□ -0.28
ZNF544-219ENST00000602260 BLOC1S2Q6QNY1 142 aa13.29□□□□□ -0.28
ZNF544-219ENST00000602260 DHX37Q8IY37 1157 aaKnown RBP13.29□□□□□ -0.28
ZNF544-219ENST00000602260 SMARCC2Q8TAQ2 1214 aa13.29□□□□□ -0.28
ZNF544-219ENST00000602260 EMID1Q96A84 441 aaPredicted RBP13.29□□□□□ -0.28
ZNF544-219ENST00000602260 ZFP91Q96JP5 570 aaPredicted RBP13.29□□□□□ -0.28
ZNF544-219ENST00000602260 WNT8AQ9H1J5 351 aa13.29□□□□□ -0.28
ZNF544-219ENST00000602260 SLC28A3Q9HAS3 691 aa13.29□□□□□ -0.28
ZNF544-219ENST00000602260 TRMT13Q9NUP7 481 aaKnown RBP13.29□□□□□ -0.28
ZNF544-219ENST00000602260 FRMPD4Q14CM0 1322 aa13.29□□□□□ -0.28
ZNF544-219ENST00000602260 GOLGA8AA7E2F4 631 aa13.28□□□□□ -0.28
ZNF544-219ENST00000602260 GOLGA8BA8MQT2 603 aa13.28□□□□□ -0.28
ZNF544-219ENST00000602260 EPB41L2O43491 1005 aaKnown RBP13.28□□□□□ -0.28
ZNF544-219ENST00000602260 CENPBP07199 599 aaPredicted RBP13.28□□□□□ -0.28
ZNF544-219ENST00000602260 CASTP20810 708 aaKnown RBP13.28□□□□□ -0.28
ZNF544-219ENST00000602260 RFC2P35250 354 aa13.28□□□□□ -0.28
ZNF544-219ENST00000602260 RCAN1P53805 252 aa13.28□□□□□ -0.28
ZNF544-219ENST00000602260 MRPS9P82933 396 aaKnown RBP13.28□□□□□ -0.28
ZNF544-219ENST00000602260 FGD1P98174 961 aa13.28□□□□□ -0.28
ZNF544-219ENST00000602260 SP2Q02086 613 aa13.28□□□□□ -0.28
ZNF544-219ENST00000602260 PTPN11Q06124 597 aaPredicted RBP13.28□□□□□ -0.28
ZNF544-219ENST00000602260 DGKDQ16760 1214 aa13.28□□□□□ -0.28
ZNF544-219ENST00000602260 CELF3Q5SZQ8 465 aaKnown RBP13.28□□□□□ -0.28
ZNF544-219ENST00000602260 NFRKBQ6P4R8 1299 aa13.28□□□□□ -0.28
ZNF544-219ENST00000602260 Q6ZUG5 572 aa13.28□□□□□ -0.28
ZNF544-219ENST00000602260 HEATR3Q7Z4Q2 680 aa13.28□□□□□ -0.28
ZNF544-219ENST00000602260 PPTC7Q8NI37 304 aa13.28□□□□□ -0.28
ZNF544-219ENST00000602260 FAM217BQ9NTX9 383 aaPredicted RBP13.28□□□□□ -0.28
ZNF544-219ENST00000602260 CXXC1Q9P0U4 656 aaPredicted RBP13.28□□□□□ -0.28
ZNF544-219ENST00000602260 SLC4A7Q9Y6M7 1214 aa13.28□□□□□ -0.28
ZNF544-219ENST00000602260 V9GY48 417 aaPredicted RBP13.28□□□□□ -0.28
ZNF544-219ENST00000602260 UMODL1Q5DID0 1318 aa13.28□□□□□ -0.28
ZNF544-219ENST00000602260 MYO9BQ13459 2157 aa13.27□□□□□ -0.28
ZNF544-219ENST00000602260 GRXCR1A8MXD5 290 aa13.27□□□□□ -0.29
ZNF544-219ENST00000602260 PITPNM1O00562 1244 aa13.27□□□□□ -0.29
ZNF544-219ENST00000602260 STAM2O75886 525 aa13.27□□□□□ -0.29
ZNF544-219ENST00000602260 ACTN1P12814 892 aa13.27□□□□□ -0.29
ZNF544-219ENST00000602260 RPS6KB1P23443 525 aa13.27□□□□□ -0.29
ZNF544-219ENST00000602260 PSMA5P28066 241 aa13.27□□□□□ -0.29
ZNF544-219ENST00000602260 ICAM3P32942 547 aa13.27□□□□□ -0.29
ZNF544-219ENST00000602260 CCL23P55773 120 aa13.27□□□□□ -0.29
ZNF544-219ENST00000602260 GNPTABQ3T906 1256 aa13.27□□□□□ -0.29
ZNF544-219ENST00000602260 FAM47CQ5HY64 1035 aa13.27□□□□□ -0.29
ZNF544-219ENST00000602260 MYSM1Q5VVJ2 828 aa13.27□□□□□ -0.29
ZNF544-219ENST00000602260 XRRA1Q6P2D8 792 aa13.27□□□□□ -0.29
ZNF544-219ENST00000602260 OTOP2Q7RTS6 562 aa13.27□□□□□ -0.29
ZNF544-219ENST00000602260 USP38Q8NB14 1042 aa13.27□□□□□ -0.29
ZNF544-219ENST00000602260 PPP1R13LQ8WUF5 828 aa13.27□□□□□ -0.29
ZNF544-219ENST00000602260 ATXN2LQ8WWM7 1075 aaKnown RBP13.27□□□□□ -0.29
ZNF544-219ENST00000602260 KAT2BQ92831 832 aa13.27□□□□□ -0.29
ZNF544-219ENST00000602260 GPKOWQ92917 476 aaPredicted RBP eCLIP13.27□□□□□ -0.29
ZNF544-219ENST00000602260 SPATA33Q96N06 139 aa13.27□□□□□ -0.29
ZNF544-219ENST00000602260 INPP4AQ96PE3 977 aaPredicted RBP13.27□□□□□ -0.29
ZNF544-219ENST00000602260 PRDM12Q9H4Q4 367 aa13.27□□□□□ -0.29
ZNF544-219ENST00000602260 RTEL1Q9NZ71 1219 aa13.27□□□□□ -0.29
ZNF544-219ENST00000602260 THEGQ9P2T0 379 aa13.27□□□□□ -0.29
ZNF544-219ENST00000602260 NAP1L2Q9ULW6 460 aaPredicted RBP13.27□□□□□ -0.29
ZNF544-219ENST00000602260 PCDHA11Q9Y5I1 949 aa13.27□□□□□ -0.29
ZNF544-219ENST00000602260 SPATA31C2B4DYI2 1134 aa13.26□□□□□ -0.29
ZNF544-219ENST00000602260 SORBS3O60504 671 aa13.26□□□□□ -0.29
ZNF544-219ENST00000602260 PPFIA4O75335 1185 aa13.26□□□□□ -0.29
ZNF544-219ENST00000602260 GGPS1O95749 300 aa13.26□□□□□ -0.29
ZNF544-219ENST00000602260 CYP2C9P11712 490 aa13.26□□□□□ -0.29
ZNF544-219ENST00000602260 HOXD8P13378 290 aaPredicted RBP13.26□□□□□ -0.29
ZNF544-219ENST00000602260 UBA1P22314 1058 aaKnown RBP13.26□□□□□ -0.29
ZNF544-219ENST00000602260 CDC27P30260 824 aa13.26□□□□□ -0.29
ZNF544-219ENST00000602260 CHMP4BP1P59074 171 aa13.26□□□□□ -0.29
ZNF544-219ENST00000602260 APOBRQ0VD83 1088 aa13.26□□□□□ -0.29
ZNF544-219ENST00000602260 PCNX4Q63HM2 1172 aa13.26□□□□□ -0.29
ZNF544-219ENST00000602260 PPP2R2DQ66LE6 453 aa13.26□□□□□ -0.29
ZNF544-219ENST00000602260 WWC2Q6AWC2 1192 aa13.26□□□□□ -0.29
ZNF544-219ENST00000602260 FBXL16Q8N461 479 aa13.26□□□□□ -0.29
ZNF544-219ENST00000602260 CNTNAP5Q8WYK1 1306 aa13.26□□□□□ -0.29
ZNF544-219ENST00000602260 BRF1Q92994 677 aa13.26□□□□□ -0.29
ZNF544-219ENST00000602260 USP26Q9BXU7 913 aa13.26□□□□□ -0.29
ZNF544-219ENST00000602260 NKX2-4Q9H2Z4 354 aa13.26□□□□□ -0.29
ZNF544-219ENST00000602260 MLXIPQ9HAP2 919 aa13.26□□□□□ -0.29
ZNF544-219ENST00000602260 BDP1A6H8Y1 2624 aa13.26□□□□□ -0.29
ZNF544-219ENST00000602260 NCOR1O75376 2440 aa13.25□□□□□ -0.29
ZNF544-219ENST00000602260 KIAA1217Q5T5P2 1943 aa13.25□□□□□ -0.29
ZNF544-219ENST00000602260 CCDC196A0A1B0GTZ2 297 aa13.25□□□□□ -0.29
ZNF544-219ENST00000602260 ZBBXA8MT70 800 aa13.25□□□□□ -0.29
ZNF544-219ENST00000602260 FIBPO43427 364 aa13.25□□□□□ -0.29
ZNF544-219ENST00000602260 ATP2A2P16615 1042 aaKnown RBP13.25□□□□□ -0.29
ZNF544-219ENST00000602260 ADD1P35611 737 aaKnown RBP13.25□□□□□ -0.29
ZNF544-219ENST00000602260 METAP2P50579 478 aaKnown RBP eCLIP13.25□□□□□ -0.29
ZNF544-219ENST00000602260 SEMA3FQ13275 785 aa13.25□□□□□ -0.29
ZNF544-219ENST00000602260 BFSP2Q13515 415 aa13.25□□□□□ -0.29
ZNF544-219ENST00000602260 UBE2SQ16763 222 aa13.25□□□□□ -0.29
ZNF544-219ENST00000602260 HSDL1Q3SXM5 330 aa13.25□□□□□ -0.29
ZNF544-219ENST00000602260 SESTD1Q86VW0 696 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms