RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 HAS3O00219 553 aa15.25■□□□□ 0.03
RPS28-204ENST00000602140 PPFIA4O75335 1185 aa15.25■□□□□ 0.03
RPS28-204ENST00000602140 ARHGEF15O94989 841 aa15.25■□□□□ 0.03
RPS28-204ENST00000602140 GGPS1O95749 300 aa15.25■□□□□ 0.03
RPS28-204ENST00000602140 HOXD8P13378 290 aaPredicted RBP15.25■□□□□ 0.03
RPS28-204ENST00000602140 CCND2P30279 289 aa15.25■□□□□ 0.03
RPS28-204ENST00000602140 KCNJ6P48051 423 aa15.25■□□□□ 0.03
RPS28-204ENST00000602140 MRPS5P82675 430 aaKnown RBP15.25■□□□□ 0.03
RPS28-204ENST00000602140 SP2Q02086 613 aa15.25■□□□□ 0.03
RPS28-204ENST00000602140 TAP1Q03518 808 aa15.25■□□□□ 0.03
RPS28-204ENST00000602140 RBL2Q08999 1139 aa15.25■□□□□ 0.03
RPS28-204ENST00000602140 TROAPQ12815 778 aa15.25■□□□□ 0.03
RPS28-204ENST00000602140 SART3Q15020 963 aaKnown RBP15.25■□□□□ 0.03
RPS28-204ENST00000602140 HSDL1Q3SXM5 330 aa15.25■□□□□ 0.03
RPS28-204ENST00000602140 CELF3Q5SZQ8 465 aaKnown RBP15.25■□□□□ 0.03
RPS28-204ENST00000602140 SPATA33Q96N06 139 aa15.25■□□□□ 0.03
RPS28-204ENST00000602140 TRANK1O15050 2925 aa15.25■□□□□ 0.03
RPS28-204ENST00000602140 TTC28Q96AY4 2481 aa15.24■□□□□ 0.03
RPS28-204ENST00000602140 TRIP12Q14669 1992 aaPredicted RBP15.24■□□□□ 0.03
RPS28-204ENST00000602140 EPOPA6NHQ4 379 aa15.24■□□□□ 0.03
RPS28-204ENST00000602140 TNFRSF10AO00220 468 aa15.24■□□□□ 0.03
RPS28-204ENST00000602140 SGSM2O43147 1006 aa15.24■□□□□ 0.03
RPS28-204ENST00000602140 TLL1O43897 1013 aa15.24■□□□□ 0.03
RPS28-204ENST00000602140 NBNO60934 754 aa15.24■□□□□ 0.03
RPS28-204ENST00000602140 PARNO95453 639 aaKnown RBP15.24■□□□□ 0.03
RPS28-204ENST00000602140 TGFB3P10600 412 aa15.24■□□□□ 0.03
RPS28-204ENST00000602140 UBA1P22314 1058 aaKnown RBP15.24■□□□□ 0.03
RPS28-204ENST00000602140 WDR5P61964 334 aaKnown RBP15.24■□□□□ 0.03
RPS28-204ENST00000602140 IRX6P78412 446 aaPredicted RBP15.24■□□□□ 0.03
RPS28-204ENST00000602140 ZNF200P98182 395 aaPredicted RBP15.24■□□□□ 0.03
RPS28-204ENST00000602140 PTK7Q13308 1070 aa15.24■□□□□ 0.03
RPS28-204ENST00000602140 CNKSR3Q6P9H4 555 aa15.24■□□□□ 0.03
RPS28-204ENST00000602140 CATIPQ7Z7H3 387 aa15.24■□□□□ 0.03
RPS28-204ENST00000602140 TET1Q8NFU7 2136 aa15.24■□□□□ 0.03
RPS28-204ENST00000602140 PIBF1Q8WXW3 757 aa15.24■□□□□ 0.03
RPS28-204ENST00000602140 ARNTL2Q8WYA1 636 aa15.24■□□□□ 0.03
RPS28-204ENST00000602140 GPKOWQ92917 476 aaPredicted RBP eCLIP15.24■□□□□ 0.03
RPS28-204ENST00000602140 TSPYL2Q9H2G4 693 aaPredicted RBP15.24■□□□□ 0.03
RPS28-204ENST00000602140 XIRP2A4UGR9 3374 aa15.24■□□□□ 0.03
RPS28-204ENST00000602140 GTPBP6O43824 516 aaPredicted RBP15.23■□□□□ 0.03
RPS28-204ENST00000602140 CXCL10P02778 98 aa15.23■□□□□ 0.03
RPS28-204ENST00000602140 ANTXR2P58335 489 aa15.23■□□□□ 0.03
RPS28-204ENST00000602140 HIC1Q14526 733 aa15.23■□□□□ 0.03
RPS28-204ENST00000602140 ZNF618Q5T7W0 954 aa15.23■□□□□ 0.03
RPS28-204ENST00000602140 TMCO2Q7Z6W1 182 aaPredicted RBP15.23■□□□□ 0.03
RPS28-204ENST00000602140 IGDCC4Q8TDY8 1250 aa15.23■□□□□ 0.03
RPS28-204ENST00000602140 WNT8BQ93098 351 aa15.23■□□□□ 0.03
RPS28-204ENST00000602140 MLXIPQ9HAP2 919 aa15.23■□□□□ 0.03
RPS28-204ENST00000602140 MTCH2Q9Y6C9 303 aa15.23■□□□□ 0.03
RPS28-204ENST00000602140 MYH7BA7E2Y1 1941 aa15.23■□□□□ 0.03
RPS28-204ENST00000602140 RBAK-RBAKDNI3L0D1 243 aa15.22■□□□□ 0.03
RPS28-204ENST00000602140 POU3F3P20264 500 aaPredicted RBP15.22■□□□□ 0.03
RPS28-204ENST00000602140 DEFB103AP81534 67 aa15.22■□□□□ 0.03
RPS28-204ENST00000602140 SKIV2LQ15477 1246 aaKnown RBP15.22■□□□□ 0.03
RPS28-204ENST00000602140 TCTN1Q2MV58 587 aa15.22■□□□□ 0.03
RPS28-204ENST00000602140 TRIM71Q2Q1W2 868 aaKnown RBP15.22■□□□□ 0.03
RPS28-204ENST00000602140 MB21D2Q8IYB1 491 aaPredicted RBP15.22■□□□□ 0.03
RPS28-204ENST00000602140 IL27Q8NEV9 243 aa15.22■□□□□ 0.03
RPS28-204ENST00000602140 ADAMTS19Q8TE59 1207 aa15.22■□□□□ 0.03
RPS28-204ENST00000602140 MAP4K1Q92918 833 aa15.22■□□□□ 0.03
RPS28-204ENST00000602140 C16orf70Q9BSU1 422 aa15.22■□□□□ 0.03
RPS28-204ENST00000602140 ZBED2Q9BTP6 218 aa15.22■□□□□ 0.03
RPS28-204ENST00000602140 BCAS3Q9H6U6 928 aa15.22■□□□□ 0.03
RPS28-204ENST00000602140 RBM8AQ9Y5S9 174 aaKnown RBP15.22■□□□□ 0.03
RPS28-204ENST00000602140 ABHD14A-ACY1A0A1B0GW23 586 aa15.21■□□□□ 0.03
RPS28-204ENST00000602140 LCHNA4D1U4 455 aa15.21■□□□□ 0.03
RPS28-204ENST00000602140 MRPS9P82933 396 aaKnown RBP15.21■□□□□ 0.03
RPS28-204ENST00000602140 TFF2Q03403 129 aa15.21■□□□□ 0.03
RPS28-204ENST00000602140 MBTPS1Q14703 1052 aa15.21■□□□□ 0.03
RPS28-204ENST00000602140 GNPTABQ3T906 1256 aa15.21■□□□□ 0.03
RPS28-204ENST00000602140 KRT40Q6A162 431 aa15.21■□□□□ 0.03
RPS28-204ENST00000602140 TRAF7Q6Q0C0 670 aa15.21■□□□□ 0.03
RPS28-204ENST00000602140 SPRED2Q7Z698 418 aa15.21■□□□□ 0.03
RPS28-204ENST00000602140 MYL10Q9BUA6 226 aa15.21■□□□□ 0.03
RPS28-204ENST00000602140 BAZ2BQ9UIF8 2168 aaKnown RBP15.21■□□□□ 0.02
RPS28-204ENST00000602140 FRMPD4Q14CM0 1322 aa15.2■□□□□ 0.02
RPS28-204ENST00000602140 PTPRSQ13332 1948 aa15.2■□□□□ 0.02
RPS28-204ENST00000602140 H3BRB1 525 aa15.2■□□□□ 0.02
RPS28-204ENST00000602140 IKBKEQ14164 716 aa15.2■□□□□ 0.02
RPS28-204ENST00000602140 SERINC5Q86VE9 423 aa15.2■□□□□ 0.02
RPS28-204ENST00000602140 ZNF654Q8IZM8 581 aa15.2■□□□□ 0.02
RPS28-204ENST00000602140 INPP4AQ96PE3 977 aaPredicted RBP15.2■□□□□ 0.02
RPS28-204ENST00000602140 UHRF1Q96T88 793 aaPredicted RBP15.2■□□□□ 0.02
RPS28-204ENST00000602140 TUT1Q9H6E5 874 aaKnown RBP15.2■□□□□ 0.02
RPS28-204ENST00000602140 LY9Q9HBG7 655 aa15.2■□□□□ 0.02
RPS28-204ENST00000602140 RTEL1Q9NZ71 1219 aa15.2■□□□□ 0.02
RPS28-204ENST00000602140 C17orf102A2RUQ5 167 aa15.19■□□□□ 0.02
RPS28-204ENST00000602140 SPATA31C2B4DYI2 1134 aa15.19■□□□□ 0.02
RPS28-204ENST00000602140 NOP56O00567 594 aaKnown RBP15.19■□□□□ 0.02
RPS28-204ENST00000602140 EFCAB14O75071 495 aa15.19■□□□□ 0.02
RPS28-204ENST00000602140 LGR5O75473 907 aa15.19■□□□□ 0.02
RPS28-204ENST00000602140 STAM2O75886 525 aa15.19■□□□□ 0.02
RPS28-204ENST00000602140 LGALS2P05162 132 aa15.19■□□□□ 0.02
RPS28-204ENST00000602140 ICAM3P32942 547 aa15.19■□□□□ 0.02
RPS28-204ENST00000602140 KIF5BP33176 963 aa15.19■□□□□ 0.02
RPS28-204ENST00000602140 THPOP40225 353 aa15.19■□□□□ 0.02
RPS28-204ENST00000602140 GRB10Q13322 594 aa15.19■□□□□ 0.02
RPS28-204ENST00000602140 USP17L6PQ6QN14 398 aa15.19■□□□□ 0.02
RPS28-204ENST00000602140 CASC1Q6TDU7 716 aa15.19■□□□□ 0.02
RPS28-204ENST00000602140 CYFIP1Q7L576 1253 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms