RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 CERS4Q9HA82 394 aa20.89■□□□□ 0.93
CHMP2A-208ENST00000601220 TANC1Q9C0D5 1861 aa20.88■□□□□ 0.93
CHMP2A-208ENST00000601220 MYO9BQ13459 2157 aa20.88■□□□□ 0.93
CHMP2A-208ENST00000601220 E7EWF7 191 aa20.88■□□□□ 0.93
CHMP2A-208ENST00000601220 TNFRSF10AO00220 468 aa20.88■□□□□ 0.93
CHMP2A-208ENST00000601220 SGSM2O43147 1006 aa20.88■□□□□ 0.93
CHMP2A-208ENST00000601220 ANTXR2P58335 489 aa20.88■□□□□ 0.93
CHMP2A-208ENST00000601220 WDR5P61964 334 aaKnown RBP20.88■□□□□ 0.93
CHMP2A-208ENST00000601220 PTK7Q13308 1070 aa20.88■□□□□ 0.93
CHMP2A-208ENST00000601220 KCNV1Q6PIU1 500 aa20.88■□□□□ 0.93
CHMP2A-208ENST00000601220 SPRED2Q7Z698 418 aa20.88■□□□□ 0.93
CHMP2A-208ENST00000601220 HOMER1Q86YM7 354 aa20.88■□□□□ 0.93
CHMP2A-208ENST00000601220 TET1Q8NFU7 2136 aa20.88■□□□□ 0.93
CHMP2A-208ENST00000601220 IGDCC4Q8TDY8 1250 aa20.88■□□□□ 0.93
CHMP2A-208ENST00000601220 RUFY2Q8WXA3 655 aa20.88■□□□□ 0.93
CHMP2A-208ENST00000601220 ZFP91Q96JP5 570 aaPredicted RBP20.88■□□□□ 0.93
CHMP2A-208ENST00000601220 C16orf70Q9BSU1 422 aa20.88■□□□□ 0.93
CHMP2A-208ENST00000601220 KATNAL1Q9BW62 490 aa20.88■□□□□ 0.93
CHMP2A-208ENST00000601220 BCAS3Q9H6U6 928 aa20.88■□□□□ 0.93
CHMP2A-208ENST00000601220 KIAA1217Q5T5P2 1943 aa20.88■□□□□ 0.93
CHMP2A-208ENST00000601220 PNMA6FA0A0J9YX94 578 aa20.87■□□□□ 0.93
CHMP2A-208ENST00000601220 GCOM1H8Y6P7 765 aaPredicted RBP20.87■□□□□ 0.93
CHMP2A-208ENST00000601220 GGPS1O95749 300 aa20.87■□□□□ 0.93
CHMP2A-208ENST00000601220 POLR2MP0CAP2 368 aa20.87■□□□□ 0.93
CHMP2A-208ENST00000601220 TGFB3P10600 412 aa20.87■□□□□ 0.93
CHMP2A-208ENST00000601220 UBA1P22314 1058 aaKnown RBP20.87■□□□□ 0.93
CHMP2A-208ENST00000601220 MBTPS1Q14703 1052 aa20.87■□□□□ 0.93
CHMP2A-208ENST00000601220 FRMPD4Q14CM0 1322 aa20.86■□□□□ 0.93
CHMP2A-208ENST00000601220 SORBS3O60504 671 aa20.86■□□□□ 0.93
CHMP2A-208ENST00000601220 PARNO95453 639 aaKnown RBP20.86■□□□□ 0.93
CHMP2A-208ENST00000601220 DEFB103AP81534 67 aa20.86■□□□□ 0.93
CHMP2A-208ENST00000601220 WTAPQ15007 396 aa20.86■□□□□ 0.93
CHMP2A-208ENST00000601220 CNKSR3Q6P9H4 555 aa20.86■□□□□ 0.93
CHMP2A-208ENST00000601220 TMCO2Q7Z6W1 182 aaPredicted RBP20.86■□□□□ 0.93
CHMP2A-208ENST00000601220 MB21D2Q8IYB1 491 aaPredicted RBP20.86■□□□□ 0.93
CHMP2A-208ENST00000601220 NCOA7Q8NI08 942 aa20.86■□□□□ 0.93
CHMP2A-208ENST00000601220 MAP4K1Q92918 833 aa20.86■□□□□ 0.93
CHMP2A-208ENST00000601220 SPATA33Q96N06 139 aa20.86■□□□□ 0.93
CHMP2A-208ENST00000601220 XIRP2A4UGR9 3374 aa20.85■□□□□ 0.93
CHMP2A-208ENST00000601220 LCHNA4D1U4 455 aa20.85■□□□□ 0.93
CHMP2A-208ENST00000601220 KIF28PB7ZC32 967 aa20.85■□□□□ 0.93
CHMP2A-208ENST00000601220 LPXNO60711 386 aa20.85■□□□□ 0.93
CHMP2A-208ENST00000601220 CCND2P30279 289 aa20.85■□□□□ 0.93
CHMP2A-208ENST00000601220 MRPS9P82933 396 aaKnown RBP20.85■□□□□ 0.93
CHMP2A-208ENST00000601220 TRAF1Q13077 416 aa20.85■□□□□ 0.93
CHMP2A-208ENST00000601220 ZNF618Q5T7W0 954 aa20.85■□□□□ 0.93
CHMP2A-208ENST00000601220 KRT40Q6A162 431 aa20.85■□□□□ 0.93
CHMP2A-208ENST00000601220 FCHSD1Q86WN1 690 aa20.85■□□□□ 0.93
CHMP2A-208ENST00000601220 ADAMTS19Q8TE59 1207 aa20.85■□□□□ 0.93
CHMP2A-208ENST00000601220 TRANK1O15050 2925 aa20.84■□□□□ 0.93
CHMP2A-208ENST00000601220 BMP1P13497 986 aa20.84■□□□□ 0.93
CHMP2A-208ENST00000601220 HOXC8P31273 242 aa20.84■□□□□ 0.93
CHMP2A-208ENST00000601220 ICAM3P32942 547 aa20.84■□□□□ 0.93
CHMP2A-208ENST00000601220 MKRN4PQ13434 485 aaPredicted RBP20.84■□□□□ 0.93
CHMP2A-208ENST00000601220 MICALL1Q8N3F8 863 aa20.84■□□□□ 0.93
CHMP2A-208ENST00000601220 ARNTL2Q8WYA1 636 aa20.84■□□□□ 0.93
CHMP2A-208ENST00000601220 REV3LO60673 3130 aa20.83■□□□□ 0.93
CHMP2A-208ENST00000601220 ABHD14A-ACY1A0A1B0GW23 586 aa20.83■□□□□ 0.93
CHMP2A-208ENST00000601220 ERICH2A1L162 156 aa20.83■□□□□ 0.93
CHMP2A-208ENST00000601220 TLL1O43897 1013 aa20.83■□□□□ 0.93
CHMP2A-208ENST00000601220 KCNJ6P48051 423 aa20.83■□□□□ 0.93
CHMP2A-208ENST00000601220 TFF2Q03403 129 aa20.83■□□□□ 0.93
CHMP2A-208ENST00000601220 SEMA3FQ13275 785 aa20.83■□□□□ 0.93
CHMP2A-208ENST00000601220 RALYLQ86SE5 291 aaKnown RBP20.83■□□□□ 0.93
CHMP2A-208ENST00000601220 SERINC5Q86VE9 423 aa20.83■□□□□ 0.93
CHMP2A-208ENST00000601220 INPP4AQ96PE3 977 aaPredicted RBP20.83■□□□□ 0.93
CHMP2A-208ENST00000601220 SPATA31C2B4DYI2 1134 aa20.82■□□□□ 0.92
CHMP2A-208ENST00000601220 GRB10Q13322 594 aa20.82■□□□□ 0.92
CHMP2A-208ENST00000601220 COL9A3Q14050 684 aaPredicted RBP20.82■□□□□ 0.92
CHMP2A-208ENST00000601220 MAP3K14Q99558 947 aa20.82■□□□□ 0.92
CHMP2A-208ENST00000601220 LY9Q9HBG7 655 aa20.82■□□□□ 0.92
CHMP2A-208ENST00000601220 TRIP12Q14669 1992 aaPredicted RBP20.82■□□□□ 0.92
CHMP2A-208ENST00000601220 MYH6P13533 1939 aa20.82■□□□□ 0.92
CHMP2A-208ENST00000601220 GTPBP6O43824 516 aaPredicted RBP20.81■□□□□ 0.92
CHMP2A-208ENST00000601220 GJB5O95377 273 aa20.81■□□□□ 0.92
CHMP2A-208ENST00000601220 SART3Q15020 963 aaKnown RBP20.81■□□□□ 0.92
CHMP2A-208ENST00000601220 CATIPQ7Z7H3 387 aa20.81■□□□□ 0.92
CHMP2A-208ENST00000601220 UHRF1Q96T88 793 aaPredicted RBP20.81■□□□□ 0.92
CHMP2A-208ENST00000601220 TSPYL2Q9H2G4 693 aaPredicted RBP20.81■□□□□ 0.92
CHMP2A-208ENST00000601220 MLXIPQ9HAP2 919 aa20.81■□□□□ 0.92
CHMP2A-208ENST00000601220 TELO2Q9Y4R8 837 aa20.81■□□□□ 0.92
CHMP2A-208ENST00000601220 PTPRSQ13332 1948 aa20.8■□□□□ 0.92
CHMP2A-208ENST00000601220 PRRC2BQ5JSZ5 2229 aaKnown RBP20.8■□□□□ 0.92
CHMP2A-208ENST00000601220 H3BRB1 525 aa20.8■□□□□ 0.92
CHMP2A-208ENST00000601220 STAM2O75886 525 aa20.8■□□□□ 0.92
CHMP2A-208ENST00000601220 LGALS2P05162 132 aa20.8■□□□□ 0.92
CHMP2A-208ENST00000601220 SMARCA1P28370 1054 aa20.8■□□□□ 0.92
CHMP2A-208ENST00000601220 PIBF1Q8WXW3 757 aa20.8■□□□□ 0.92
CHMP2A-208ENST00000601220 RAD9AQ99638 391 aa20.8■□□□□ 0.92
CHMP2A-208ENST00000601220 MYL10Q9BUA6 226 aa20.8■□□□□ 0.92
CHMP2A-208ENST00000601220 SPZ1Q9BXG8 430 aa20.8■□□□□ 0.92
CHMP2A-208ENST00000601220 RNPEPQ9H4A4 650 aa20.8■□□□□ 0.92
CHMP2A-208ENST00000601220 TUT1Q9H6E5 874 aaKnown RBP20.8■□□□□ 0.92
CHMP2A-208ENST00000601220 RBM8AQ9Y5S9 174 aaKnown RBP20.8■□□□□ 0.92
CHMP2A-208ENST00000601220 PIK3CDO00329 1044 aa20.79■□□□□ 0.92
CHMP2A-208ENST00000601220 MEIS2O14770 477 aa20.79■□□□□ 0.92
CHMP2A-208ENST00000601220 EFCAB14O75071 495 aa20.79■□□□□ 0.92
CHMP2A-208ENST00000601220 LGR5O75473 907 aa20.79■□□□□ 0.92
CHMP2A-208ENST00000601220 SMIM10L2AP0DMW4 78 aa20.79■□□□□ 0.92
CHMP2A-208ENST00000601220 SMIM10L2BP0DMW5 78 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms