RNA–Protein interactions for RNA: ENST00000601170.5

SMG9-211, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG9, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-211ENST00000601170 CREG2Q8IUH2 290 aa16.02■□□□□ 0.15
SMG9-211ENST00000601170 CERS5Q8N5B7 392 aa16.02■□□□□ 0.15
SMG9-211ENST00000601170 PCDHA12Q9UN75 941 aa16.02■□□□□ 0.15
SMG9-211ENST00000601170 QSER1Q2KHR3 1735 aa16.02■□□□□ 0.15
SMG9-211ENST00000601170 ADAMTSL1Q8N6G6 1762 aa16.02■□□□□ 0.15
SMG9-211ENST00000601170 C10orf71Q711Q0 1435 aa16.01■□□□□ 0.15
SMG9-211ENST00000601170 ZBTB5O15062 677 aa16.01■□□□□ 0.15
SMG9-211ENST00000601170 SSBP05455 408 aaKnown RBP eCLIP16.01■□□□□ 0.15
SMG9-211ENST00000601170 PDXDC1Q6P996 788 aa16.01■□□□□ 0.15
SMG9-211ENST00000601170 FOXR2Q6PJQ5 311 aa16.01■□□□□ 0.15
SMG9-211ENST00000601170 GSPT2Q8IYD1 628 aaKnown RBP16.01■□□□□ 0.15
SMG9-211ENST00000601170 CRAMP1Q96RY5 1269 aa16.01■□□□□ 0.15
SMG9-211ENST00000601170 USP40Q9NVE5 1235 aa16.01■□□□□ 0.15
SMG9-211ENST00000601170 PANK4Q9NVE7 773 aa16.01■□□□□ 0.15
SMG9-211ENST00000601170 COL4A3BPQ9Y5P4 624 aa16.01■□□□□ 0.15
SMG9-211ENST00000601170 MYO3BQ8WXR4 1341 aa16.01■□□□□ 0.15
SMG9-211ENST00000601170 MPHOSPH10O00566 681 aaKnown RBP16.01■□□□□ 0.15
SMG9-211ENST00000601170 MYBL2P10244 700 aa16.01■□□□□ 0.15
SMG9-211ENST00000601170 MAGEA1P43355 309 aa16.01■□□□□ 0.15
SMG9-211ENST00000601170 FKBP3Q00688 224 aaKnown RBP16.01■□□□□ 0.15
SMG9-211ENST00000601170 KCNMA1Q12791 1236 aa16.01■□□□□ 0.15
SMG9-211ENST00000601170 SEPT2Q15019 361 aa16.01■□□□□ 0.15
SMG9-211ENST00000601170 FAM26FQ5R3K3 315 aa16.01■□□□□ 0.15
SMG9-211ENST00000601170 GPATCH4Q5T3I0 446 aaKnown RBP16.01■□□□□ 0.15
SMG9-211ENST00000601170 COG1Q8WTW3 980 aa16.01■□□□□ 0.15
SMG9-211ENST00000601170 GDAP1L1Q96MZ0 367 aa16.01■□□□□ 0.15
SMG9-211ENST00000601170 ALS2CR12Q96Q35 445 aa16.01■□□□□ 0.15
SMG9-211ENST00000601170 COA1Q9GZY4 146 aa16.01■□□□□ 0.15
SMG9-211ENST00000601170 PSTPIP2Q9H939 334 aa16.01■□□□□ 0.15
SMG9-211ENST00000601170 HPCAL4Q9UM19 191 aa16.01■□□□□ 0.15
SMG9-211ENST00000601170 GREB1LQ9C091 1923 aaPredicted RBP16■□□□□ 0.15
SMG9-211ENST00000601170 KDM3AQ9Y4C1 1321 aa16■□□□□ 0.15
SMG9-211ENST00000601170 TRAF5O00463 557 aa16■□□□□ 0.15
SMG9-211ENST00000601170 PPEF1O14829 653 aaPredicted RBP16■□□□□ 0.15
SMG9-211ENST00000601170 GCFC2P16383 781 aaKnown RBP16■□□□□ 0.15
SMG9-211ENST00000601170 AARSP49588 968 aaKnown RBP eCLIP16■□□□□ 0.15
SMG9-211ENST00000601170 GFPT1Q06210 699 aaPredicted RBP16■□□□□ 0.15
SMG9-211ENST00000601170 DDR1Q08345 913 aa16■□□□□ 0.15
SMG9-211ENST00000601170 CCDC40Q4G0X9 1142 aa16■□□□□ 0.15
SMG9-211ENST00000601170 GOLGA5Q8TBA6 731 aa16■□□□□ 0.15
SMG9-211ENST00000601170 UIMC1Q96RL1 719 aa16■□□□□ 0.15
SMG9-211ENST00000601170 MXD3Q9BW11 206 aa16■□□□□ 0.15
SMG9-211ENST00000601170 FGFBP2Q9BYJ0 223 aa16■□□□□ 0.15
SMG9-211ENST00000601170 NT5C3AQ9H0P0 336 aa16■□□□□ 0.15
SMG9-211ENST00000601170 TBC1D7Q9P0N9 293 aa16■□□□□ 0.15
SMG9-211ENST00000601170 SUGT1Q9Y2Z0 365 aa16■□□□□ 0.15
SMG9-211ENST00000601170 E9PMD0 336 aa16■□□□□ 0.15
SMG9-211ENST00000601170 CAPN2P17655 700 aa16■□□□□ 0.15
SMG9-211ENST00000601170 SCNN1DP51172 638 aa16■□□□□ 0.15
SMG9-211ENST00000601170 ASTE1Q2TB18 679 aaPredicted RBP16■□□□□ 0.15
SMG9-211ENST00000601170 HYIQ5T013 277 aa16■□□□□ 0.15
SMG9-211ENST00000601170 CCNI2Q6ZMN8 369 aaPredicted RBP16■□□□□ 0.15
SMG9-211ENST00000601170 MTMR8Q96EF0 704 aa16■□□□□ 0.15
SMG9-211ENST00000601170 EDEM3Q9BZQ6 932 aa16■□□□□ 0.15
SMG9-211ENST00000601170 NLRC4Q9NPP4 1024 aa16■□□□□ 0.15
SMG9-211ENST00000601170 BMP2KQ9NSY1 1161 aaPredicted RBP16■□□□□ 0.15
SMG9-211ENST00000601170 SALL4Q9UJQ4 1053 aa16■□□□□ 0.15
SMG9-211ENST00000601170 SYF2O95926 243 aaKnown RBP15.99■□□□□ 0.15
SMG9-211ENST00000601170 SLURP2P0DP57 97 aa15.99■□□□□ 0.15
SMG9-211ENST00000601170 PRLRP16471 622 aa15.99■□□□□ 0.15
SMG9-211ENST00000601170 ACTN2P35609 894 aa15.99■□□□□ 0.15
SMG9-211ENST00000601170 TDRD12Q587J7 1177 aaKnown RBP15.99■□□□□ 0.15
SMG9-211ENST00000601170 HGSNATQ68CP4 663 aa15.99■□□□□ 0.15
SMG9-211ENST00000601170 NFRKBQ6P4R8 1299 aa15.99■□□□□ 0.15
SMG9-211ENST00000601170 OSBPL9Q96SU4 736 aa15.99■□□□□ 0.15
SMG9-211ENST00000601170 SELENOOQ9BVL4 669 aa15.99■□□□□ 0.15
SMG9-211ENST00000601170 KIAA1024Q9UPX6 916 aa15.99■□□□□ 0.15
SMG9-211ENST00000601170 ATF5Q9Y2D1 282 aaPredicted RBP15.99■□□□□ 0.15
SMG9-211ENST00000601170 ZC3H4Q9UPT8 1303 aaKnown RBP15.99■□□□□ 0.15
SMG9-211ENST00000601170 EP400Q96L91 3159 aa15.99■□□□□ 0.15
SMG9-211ENST00000601170 SSU72P8A0A1W2PR75 194 aa15.99■□□□□ 0.15
SMG9-211ENST00000601170 PJA2O43164 708 aa15.99■□□□□ 0.15
SMG9-211ENST00000601170 RNF40O75150 1001 aa15.99■□□□□ 0.15
SMG9-211ENST00000601170 MAPK8IP2Q13387 824 aaPredicted RBP15.99■□□□□ 0.15
SMG9-211ENST00000601170 CCDC70Q6NSX1 233 aa15.99■□□□□ 0.15
SMG9-211ENST00000601170 ZNF572Q7Z3I7 529 aaPredicted RBP15.99■□□□□ 0.15
SMG9-211ENST00000601170 NELFCDQ8IXH7 590 aa15.99■□□□□ 0.15
SMG9-211ENST00000601170 SP8Q8IXZ3 490 aa15.99■□□□□ 0.15
SMG9-211ENST00000601170 MMGT1Q8N4V1 131 aa15.99■□□□□ 0.15
SMG9-211ENST00000601170 ANKRD13CQ8N6S4 541 aa15.99■□□□□ 0.15
SMG9-211ENST00000601170 PSMB7Q99436 277 aa15.99■□□□□ 0.15
SMG9-211ENST00000601170 FAM204AQ9H8W3 233 aa15.99■□□□□ 0.15
SMG9-211ENST00000601170 HYOU1Q9Y4L1 999 aa15.99■□□□□ 0.15
SMG9-211ENST00000601170 POTEB3A0JP26 581 aa15.98■□□□□ 0.15
SMG9-211ENST00000601170 POTECB2RU33 542 aa15.98■□□□□ 0.15
SMG9-211ENST00000601170 USP17L15C9J2P7 530 aa15.98■□□□□ 0.15
SMG9-211ENST00000601170 USP17L13C9JLJ4 530 aa15.98■□□□□ 0.15
SMG9-211ENST00000601170 USP17L11C9JVI0 530 aa15.98■□□□□ 0.15
SMG9-211ENST00000601170 USP17L18D6R9N7 530 aa15.98■□□□□ 0.15
SMG9-211ENST00000601170 USP17L22D6RA61 530 aa15.98■□□□□ 0.15
SMG9-211ENST00000601170 USP17L17D6RBQ6 530 aa15.98■□□□□ 0.15
SMG9-211ENST00000601170 USP17L19D6RCP7 530 aa15.98■□□□□ 0.15
SMG9-211ENST00000601170 USP17L20D6RJB6 530 aa15.98■□□□□ 0.15
SMG9-211ENST00000601170 POLRMTO00411 1230 aaKnown RBP15.98■□□□□ 0.15
SMG9-211ENST00000601170 HLA-DOAP06340 250 aa15.98■□□□□ 0.15
SMG9-211ENST00000601170 TCP1P17987 556 aaKnown RBP15.98■□□□□ 0.15
SMG9-211ENST00000601170 CXCR5P32302 372 aa15.98■□□□□ 0.15
SMG9-211ENST00000601170 SLC1A4P43007 532 aa15.98■□□□□ 0.15
SMG9-211ENST00000601170 CACNB1Q02641 598 aaPredicted RBP15.98■□□□□ 0.15
SMG9-211ENST00000601170 RASSF7Q02833 373 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms