RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 ZFP91Q96JP5 570 aaPredicted RBP18.96■□□□□ 0.63
USHBP1-210ENST00000600286 KATNBL1Q9H079 304 aa18.96■□□□□ 0.63
USHBP1-210ENST00000600286 PLXNA1Q9UIW2 1896 aa18.95■□□□□ 0.62
USHBP1-210ENST00000600286 SPATA31C2B4DYI2 1134 aa18.95■□□□□ 0.62
USHBP1-210ENST00000600286 MEIS1O00470 390 aa18.95■□□□□ 0.62
USHBP1-210ENST00000600286 DUSP11O75319 330 aaKnown RBP18.95■□□□□ 0.62
USHBP1-210ENST00000600286 BAG4O95429 457 aaKnown RBP18.95■□□□□ 0.62
USHBP1-210ENST00000600286 ATP2B1P20020 1258 aa18.95■□□□□ 0.62
USHBP1-210ENST00000600286 ICAM3P32942 547 aa18.95■□□□□ 0.62
USHBP1-210ENST00000600286 MTFR1Q15390 333 aa18.95■□□□□ 0.62
USHBP1-210ENST00000600286 DUSP28Q4G0W2 176 aa18.95■□□□□ 0.62
USHBP1-210ENST00000600286 PRR16Q569H4 304 aa18.95■□□□□ 0.62
USHBP1-210ENST00000600286 RILPL1Q5EBL4 403 aa18.95■□□□□ 0.62
USHBP1-210ENST00000600286 PPP4R3AQ6IN85 833 aa18.95■□□□□ 0.62
USHBP1-210ENST00000600286 TNFRSF25Q93038 417 aa18.95■□□□□ 0.62
USHBP1-210ENST00000600286 MLXIPQ9HAP2 919 aa18.95■□□□□ 0.62
USHBP1-210ENST00000600286 PDGFCQ9NRA1 345 aa18.95■□□□□ 0.62
USHBP1-210ENST00000600286 Q9Y3F1 56 aa18.95■□□□□ 0.62
USHBP1-210ENST00000600286 CYP3A7-CYP3A51PA0A087WV96 503 aa18.94■□□□□ 0.62
USHBP1-210ENST00000600286 GH1P01241 217 aa18.94■□□□□ 0.62
USHBP1-210ENST00000600286 TFRCP02786 760 aaKnown RBP18.94■□□□□ 0.62
USHBP1-210ENST00000600286 GJB1P08034 283 aa18.94■□□□□ 0.62
USHBP1-210ENST00000600286 ITGB5P18084 799 aa18.94■□□□□ 0.62
USHBP1-210ENST00000600286 CYP3A7P24462 503 aa18.94■□□□□ 0.62
USHBP1-210ENST00000600286 DHX37Q8IY37 1157 aaKnown RBP18.94■□□□□ 0.62
USHBP1-210ENST00000600286 ARRDC4Q8NCT1 418 aa18.94■□□□□ 0.62
USHBP1-210ENST00000600286 CRYGNQ8WXF5 182 aa18.94■□□□□ 0.62
USHBP1-210ENST00000600286 DEFB118Q96PH6 123 aa18.94■□□□□ 0.62
USHBP1-210ENST00000600286 SENP7Q9BQF6 1050 aa18.94■□□□□ 0.62
USHBP1-210ENST00000600286 SDF4Q9BRK5 362 aa18.94■□□□□ 0.62
USHBP1-210ENST00000600286 DDX25Q9UHL0 483 aaKnown RBP18.94■□□□□ 0.62
USHBP1-210ENST00000600286 DDX41Q9UJV9 622 aaKnown RBP18.94■□□□□ 0.62
USHBP1-210ENST00000600286 ZEB2O60315 1214 aa18.93■□□□□ 0.62
USHBP1-210ENST00000600286 ORC2Q13416 577 aaPredicted RBP18.93■□□□□ 0.62
USHBP1-210ENST00000600286 LAMC2Q13753 1193 aa18.93■□□□□ 0.62
USHBP1-210ENST00000600286 LY6KQ17RY6 165 aa18.93■□□□□ 0.62
USHBP1-210ENST00000600286 Q4G0T1 1027 aa18.93■□□□□ 0.62
USHBP1-210ENST00000600286 RNF180Q86T96 592 aa18.93■□□□□ 0.62
USHBP1-210ENST00000600286 OR6J1Q8NGC5 347 aa18.93■□□□□ 0.62
USHBP1-210ENST00000600286 ZNF577Q9BSK1 485 aa18.93■□□□□ 0.62
USHBP1-210ENST00000600286 XPNPEP3Q9NQH7 507 aa18.93■□□□□ 0.62
USHBP1-210ENST00000600286 PAK6Q9NQU5 681 aaPredicted RBP18.93■□□□□ 0.62
USHBP1-210ENST00000600286 KCNH7Q9NS40 1196 aa18.93■□□□□ 0.62
USHBP1-210ENST00000600286 TBC1D22BQ9NU19 505 aa18.93■□□□□ 0.62
USHBP1-210ENST00000600286 MTMR6Q9Y217 621 aa18.93■□□□□ 0.62
USHBP1-210ENST00000600286 FAM86B1E9PN63 330 aa18.92■□□□□ 0.62
USHBP1-210ENST00000600286 DYNC1LI2O43237 492 aaPredicted RBP18.92■□□□□ 0.62
USHBP1-210ENST00000600286 RGS20O76081 388 aa18.92■□□□□ 0.62
USHBP1-210ENST00000600286 MYCNP04198 464 aaPredicted RBP18.92■□□□□ 0.62
USHBP1-210ENST00000600286 FAM86B2P0C5J1 330 aa18.92■□□□□ 0.62
USHBP1-210ENST00000600286 SMPD1P17405 629 aa18.92■□□□□ 0.62
USHBP1-210ENST00000600286 EARS2Q5JPH6 523 aaKnown RBP18.92■□□□□ 0.62
USHBP1-210ENST00000600286 CCDC62Q6P9F0 684 aa18.92■□□□□ 0.62
USHBP1-210ENST00000600286 FERMT3Q86UX7 667 aa18.92■□□□□ 0.62
USHBP1-210ENST00000600286 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.91■□□□□ 0.62
USHBP1-210ENST00000600286 KIF28PB7ZC32 967 aa18.91■□□□□ 0.62
USHBP1-210ENST00000600286 SGPL1O95470 568 aa18.91■□□□□ 0.62
USHBP1-210ENST00000600286 GGPS1O95749 300 aa18.91■□□□□ 0.62
USHBP1-210ENST00000600286 ZSCAN22P10073 491 aaPredicted RBP18.91■□□□□ 0.62
USHBP1-210ENST00000600286 NUCB2P80303 420 aa18.91■□□□□ 0.62
USHBP1-210ENST00000600286 TTC38Q5R3I4 469 aa18.91■□□□□ 0.62
USHBP1-210ENST00000600286 ANO1Q5XXA6 986 aa18.91■□□□□ 0.62
USHBP1-210ENST00000600286 UBE2Q1Q7Z7E8 422 aa18.91■□□□□ 0.62
USHBP1-210ENST00000600286 TLK2Q86UE8 772 aa18.91■□□□□ 0.62
USHBP1-210ENST00000600286 CYP2W1Q8TAV3 490 aa18.91■□□□□ 0.62
USHBP1-210ENST00000600286 ATP6V1DQ9Y5K8 247 aa18.91■□□□□ 0.62
USHBP1-210ENST00000600286 FAM205CA6NFA0 338 aa18.9■□□□□ 0.62
USHBP1-210ENST00000600286 IPO5O00410 1097 aaKnown RBP18.9■□□□□ 0.62
USHBP1-210ENST00000600286 NOP56O00567 594 aaKnown RBP18.9■□□□□ 0.62
USHBP1-210ENST00000600286 TDP2O95551 362 aa18.9■□□□□ 0.62
USHBP1-210ENST00000600286 C6orf222P0C671 652 aaPredicted RBP18.9■□□□□ 0.62
USHBP1-210ENST00000600286 ARP10275 920 aa18.9■□□□□ 0.62
USHBP1-210ENST00000600286 CPT1AP50416 773 aa18.9■□□□□ 0.62
USHBP1-210ENST00000600286 CELF3Q5SZQ8 465 aaKnown RBP18.9■□□□□ 0.62
USHBP1-210ENST00000600286 SLFN12Q8IYM2 578 aa18.9■□□□□ 0.62
USHBP1-210ENST00000600286 U2AF1L4Q8WU68 220 aaKnown RBP18.9■□□□□ 0.62
USHBP1-210ENST00000600286 FAM20AQ96MK3 541 aa18.9■□□□□ 0.62
USHBP1-210ENST00000600286 AGO4Q9HCK5 861 aaKnown RBP18.9■□□□□ 0.62
USHBP1-210ENST00000600286 PKD2L1Q9P0L9 805 aa18.9■□□□□ 0.62
USHBP1-210ENST00000600286 CEP131Q9UPN4 1083 aa18.9■□□□□ 0.62
USHBP1-210ENST00000600286 GNEQ9Y223 722 aaKnown RBP18.9■□□□□ 0.62
USHBP1-210ENST00000600286 IGLV3-22A0A075B6J6 115 aa18.89■□□□□ 0.61
USHBP1-210ENST00000600286 KBTBD13C9JR72 458 aa18.89■□□□□ 0.61
USHBP1-210ENST00000600286 TBX3O15119 743 aa18.89■□□□□ 0.61
USHBP1-210ENST00000600286 NEMFO60524 1076 aa18.89■□□□□ 0.61
USHBP1-210ENST00000600286 ARIH2O95376 493 aa18.89■□□□□ 0.61
USHBP1-210ENST00000600286 BMP15O95972 392 aa18.89■□□□□ 0.61
USHBP1-210ENST00000600286 UBA1P22314 1058 aaKnown RBP18.89■□□□□ 0.61
USHBP1-210ENST00000600286 MCM7P33993 719 aa18.89■□□□□ 0.61
USHBP1-210ENST00000600286 GJA8P48165 433 aa18.89■□□□□ 0.61
USHBP1-210ENST00000600286 GJA9P57773 515 aa18.89■□□□□ 0.61
USHBP1-210ENST00000600286 ZNF174Q15697 407 aa18.89■□□□□ 0.61
USHBP1-210ENST00000600286 CALCRLQ16602 461 aa18.89■□□□□ 0.61
USHBP1-210ENST00000600286 GNASQ5JWF2 1037 aa18.89■□□□□ 0.61
USHBP1-210ENST00000600286 LHX8Q68G74 356 aa18.89■□□□□ 0.61
USHBP1-210ENST00000600286 METTL7BQ6UX53 244 aa18.89■□□□□ 0.61
USHBP1-210ENST00000600286 CYFIP1Q7L576 1253 aa18.89■□□□□ 0.61
USHBP1-210ENST00000600286 PCSK9Q8NBP7 692 aaKnown RBP18.89■□□□□ 0.61
USHBP1-210ENST00000600286 SPATA33Q96N06 139 aa18.89■□□□□ 0.61
USHBP1-210ENST00000600286 MBOAT7Q96N66 472 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms