RNA–Protein interactions for RNA: ENST00000600190.1

FARP1-229, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-229ENST00000600190 CYB5R4Q7L1T6 521 aa21.87■■□□□ 1.09
FARP1-229ENST00000600190 HOMER1Q86YM7 354 aa21.87■■□□□ 1.09
FARP1-229ENST00000600190 PRRC2BQ5JSZ5 2229 aaKnown RBP21.86■■□□□ 1.09
FARP1-229ENST00000600190 NBNO60934 754 aa21.86■■□□□ 1.09
FARP1-229ENST00000600190 PARNO95453 639 aaKnown RBP21.86■■□□□ 1.09
FARP1-229ENST00000600190 BMP1P13497 986 aa21.86■■□□□ 1.09
FARP1-229ENST00000600190 TRDNQ13061 729 aa21.86■■□□□ 1.09
FARP1-229ENST00000600190 CNKSR3Q6P9H4 555 aa21.86■■□□□ 1.09
FARP1-229ENST00000600190 NECAB3Q96P71 396 aaPredicted RBP21.86■■□□□ 1.09
FARP1-229ENST00000600190 PDCD2LQ9BRP1 358 aa21.86■■□□□ 1.09
FARP1-229ENST00000600190 MAP3K20Q9NYL2 800 aaKnown RBP21.86■■□□□ 1.09
FARP1-229ENST00000600190 TCF20Q9UGU0 1960 aaKnown RBP21.86■■□□□ 1.09
FARP1-229ENST00000600190 LCHNA4D1U4 455 aa21.85■■□□□ 1.09
FARP1-229ENST00000600190 PALM3A6NDB9 673 aaPredicted RBP21.85■■□□□ 1.09
FARP1-229ENST00000600190 SGSM2O43147 1006 aa21.85■■□□□ 1.09
FARP1-229ENST00000600190 RGS20O76081 388 aa21.85■■□□□ 1.09
FARP1-229ENST00000600190 F2P00734 622 aa21.85■■□□□ 1.09
FARP1-229ENST00000600190 COL9A1P20849 921 aa21.85■■□□□ 1.09
FARP1-229ENST00000600190 KCNQ1P51787 676 aa21.85■■□□□ 1.09
FARP1-229ENST00000600190 DEFB103AP81534 67 aa21.85■■□□□ 1.09
FARP1-229ENST00000600190 ZNF200P98182 395 aaPredicted RBP21.85■■□□□ 1.09
FARP1-229ENST00000600190 PTK7Q13308 1070 aa21.85■■□□□ 1.09
FARP1-229ENST00000600190 MYSM1Q5VVJ2 828 aa21.85■■□□□ 1.09
FARP1-229ENST00000600190 KCNV1Q6PIU1 500 aa21.85■■□□□ 1.09
FARP1-229ENST00000600190 STOX1Q6ZVD7 989 aa21.85■■□□□ 1.09
FARP1-229ENST00000600190 SPRED2Q7Z698 418 aa21.85■■□□□ 1.09
FARP1-229ENST00000600190 MTMR8Q96EF0 704 aa21.85■■□□□ 1.09
FARP1-229ENST00000600190 ZFP91Q96JP5 570 aaPredicted RBP21.85■■□□□ 1.09
FARP1-229ENST00000600190 SPATA33Q96N06 139 aa21.85■■□□□ 1.09
FARP1-229ENST00000600190 PTPRSQ13332 1948 aa21.84■■□□□ 1.09
FARP1-229ENST00000600190 HAS3O00219 553 aa21.84■■□□□ 1.09
FARP1-229ENST00000600190 PPFIA4O75335 1185 aa21.84■■□□□ 1.09
FARP1-229ENST00000600190 CXCL10P02778 98 aa21.84■■□□□ 1.09
FARP1-229ENST00000600190 GHRHRQ02643 423 aa21.84■■□□□ 1.09
FARP1-229ENST00000600190 RBL2Q08999 1139 aa21.84■■□□□ 1.09
FARP1-229ENST00000600190 GRB10Q13322 594 aa21.84■■□□□ 1.09
FARP1-229ENST00000600190 PGM5Q15124 567 aa21.84■■□□□ 1.09
FARP1-229ENST00000600190 CELF3Q5SZQ8 465 aaKnown RBP21.84■■□□□ 1.09
FARP1-229ENST00000600190 VSIG10LQ86VR7 867 aa21.84■■□□□ 1.09
FARP1-229ENST00000600190 U3KPZ7 1027 aaPredicted RBP21.84■■□□□ 1.09
FARP1-229ENST00000600190 RBAK-RBAKDNI3L0D1 243 aa21.83■■□□□ 1.09
FARP1-229ENST00000600190 GGPS1O95749 300 aa21.83■■□□□ 1.09
FARP1-229ENST00000600190 TCTN1Q2MV58 587 aa21.83■■□□□ 1.09
FARP1-229ENST00000600190 HSDL1Q3SXM5 330 aa21.83■■□□□ 1.09
FARP1-229ENST00000600190 ZNF618Q5T7W0 954 aa21.83■■□□□ 1.09
FARP1-229ENST00000600190 FCHSD1Q86WN1 690 aa21.83■■□□□ 1.09
FARP1-229ENST00000600190 IL31RAQ8NI17 732 aa21.83■■□□□ 1.09
FARP1-229ENST00000600190 WNT8BQ93098 351 aa21.83■■□□□ 1.09
FARP1-229ENST00000600190 PIGSQ96S52 555 aa21.83■■□□□ 1.09
FARP1-229ENST00000600190 ESYT1Q9BSJ8 1104 aa21.83■■□□□ 1.09
FARP1-229ENST00000600190 ABHD14A-ACY1A0A1B0GW23 586 aa21.82■■□□□ 1.08
FARP1-229ENST00000600190 GCOM1H8Y6P7 765 aaPredicted RBP21.82■■□□□ 1.08
FARP1-229ENST00000600190 IFIT3O14879 490 aaKnown RBP21.82■■□□□ 1.08
FARP1-229ENST00000600190 POLR2MP0CAP2 368 aa21.82■■□□□ 1.08
FARP1-229ENST00000600190 CCND2P30279 289 aa21.82■■□□□ 1.08
FARP1-229ENST00000600190 SP2Q02086 613 aa21.82■■□□□ 1.08
FARP1-229ENST00000600190 IKBKEQ14164 716 aa21.82■■□□□ 1.08
FARP1-229ENST00000600190 SAMD3Q8N6K7 520 aa21.82■■□□□ 1.08
FARP1-229ENST00000600190 MLXIPQ9HAP2 919 aa21.82■■□□□ 1.08
FARP1-229ENST00000600190 MTUS1Q9ULD2 1270 aa21.82■■□□□ 1.08
FARP1-229ENST00000600190 COG5Q9UP83 839 aa21.82■■□□□ 1.08
FARP1-229ENST00000600190 ERICH2A1L162 156 aa21.81■■□□□ 1.08
FARP1-229ENST00000600190 LPXNO60711 386 aa21.81■■□□□ 1.08
FARP1-229ENST00000600190 EIF5BO60841 1220 aaKnown RBP21.81■■□□□ 1.08
FARP1-229ENST00000600190 HOXD8P13378 290 aaPredicted RBP21.81■■□□□ 1.08
FARP1-229ENST00000600190 UBA1P22314 1058 aaKnown RBP21.81■■□□□ 1.08
FARP1-229ENST00000600190 TRAF1Q13077 416 aa21.81■■□□□ 1.08
FARP1-229ENST00000600190 HIC1Q14526 733 aa21.81■■□□□ 1.08
FARP1-229ENST00000600190 GRM4Q14833 912 aa21.81■■□□□ 1.08
FARP1-229ENST00000600190 SLC35G1Q2M3R5 365 aa21.81■■□□□ 1.08
FARP1-229ENST00000600190 TRIM71Q2Q1W2 868 aaKnown RBP21.81■■□□□ 1.08
FARP1-229ENST00000600190 FAM117BQ6P1L5 589 aa21.81■■□□□ 1.08
FARP1-229ENST00000600190 GPKOWQ92917 476 aaPredicted RBP eCLIP21.81■■□□□ 1.08
FARP1-229ENST00000600190 RAD9AQ99638 391 aa21.81■■□□□ 1.08
FARP1-229ENST00000600190 RIOX1Q9H6W3 641 aa21.81■■□□□ 1.08
FARP1-229ENST00000600190 ANO2Q9NQ90 1003 aa21.81■■□□□ 1.08
FARP1-229ENST00000600190 EFCAB14O75071 495 aa21.8■■□□□ 1.08
FARP1-229ENST00000600190 GJB5O95377 273 aa21.8■■□□□ 1.08
FARP1-229ENST00000600190 CYP21A2P08686 494 aa21.8■■□□□ 1.08
FARP1-229ENST00000600190 TGFB3P10600 412 aa21.8■■□□□ 1.08
FARP1-229ENST00000600190 THPOP40225 353 aa21.8■■□□□ 1.08
FARP1-229ENST00000600190 TRAF7Q6Q0C0 670 aa21.8■■□□□ 1.08
FARP1-229ENST00000600190 GDPD5Q8WTR4 605 aa21.8■■□□□ 1.08
FARP1-229ENST00000600190 HLA-CQ95604 372 aa21.8■■□□□ 1.08
FARP1-229ENST00000600190 SENP2Q9HC62 589 aa21.8■■□□□ 1.08
FARP1-229ENST00000600190 NCOR1O75376 2440 aa21.8■■□□□ 1.08
FARP1-229ENST00000600190 PTH1RQ03431 593 aa21.79■■□□□ 1.08
FARP1-229ENST00000600190 MBTPS1Q14703 1052 aa21.79■■□□□ 1.08
FARP1-229ENST00000600190 WTAPQ15007 396 aa21.79■■□□□ 1.08
FARP1-229ENST00000600190 RALYLQ86SE5 291 aaKnown RBP21.79■■□□□ 1.08
FARP1-229ENST00000600190 PIBF1Q8WXW3 757 aa21.79■■□□□ 1.08
FARP1-229ENST00000600190 C16orf70Q9BSU1 422 aa21.79■■□□□ 1.08
FARP1-229ENST00000600190 RAPGEFL1Q9UHV5 662 aa21.79■■□□□ 1.08
FARP1-229ENST00000600190 PNMA6FA0A0J9YX94 578 aa21.78■■□□□ 1.08
FARP1-229ENST00000600190 CYTH3O43739 400 aa21.78■■□□□ 1.08
FARP1-229ENST00000600190 LGR5O75473 907 aa21.78■■□□□ 1.08
FARP1-229ENST00000600190 SART3Q15020 963 aaKnown RBP21.78■■□□□ 1.08
FARP1-229ENST00000600190 MAP4K1Q92918 833 aa21.78■■□□□ 1.08
FARP1-229ENST00000600190 ATP6V0A1Q93050 837 aa21.78■■□□□ 1.08
FARP1-229ENST00000600190 BCAS3Q9H6U6 928 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms