RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	TTLL4	Q14679	1199 aa		24.96	■■□□□ 1.59
LTBP4-227	ENST00000600026	GNPTAB	Q3T906	1256 aa		24.96	■■□□□ 1.59
LTBP4-227	ENST00000600026	EARS2	Q5JPH6	523 aa	Known RBP	24.96	■■□□□ 1.59
LTBP4-227	ENST00000600026	IQSEC1	Q6DN90	963 aa		24.96	■■□□□ 1.59
LTBP4-227	ENST00000600026	WDR11	Q9BZH6	1224 aa		24.96	■■□□□ 1.59
LTBP4-227	ENST00000600026	MRVI1	Q9Y6F6	885 aa		24.96	■■□□□ 1.59
LTBP4-227	ENST00000600026	FAM205C	A6NFA0	338 aa		24.95	■■□□□ 1.58
LTBP4-227	ENST00000600026	ITGB5	P18084	799 aa		24.95	■■□□□ 1.58
LTBP4-227	ENST00000600026	NLRX1	Q86UT6	975 aa		24.95	■■□□□ 1.58
LTBP4-227	ENST00000600026	U2AF1L4	Q8WU68	220 aa	Known RBP	24.95	■■□□□ 1.58
LTBP4-227	ENST00000600026	POTEF	A5A3E0	1075 aa		24.94	■■□□□ 1.58
LTBP4-227	ENST00000600026	DUSP11	O75319	330 aa	Known RBP	24.94	■■□□□ 1.58
LTBP4-227	ENST00000600026	SGPL1	O95470	568 aa		24.94	■■□□□ 1.58
LTBP4-227	ENST00000600026	TXN	P10599	105 aa	Known RBP	24.94	■■□□□ 1.58
LTBP4-227	ENST00000600026	PTGS1	P23219	599 aa		24.94	■■□□□ 1.58
LTBP4-227	ENST00000600026	ICAM3	P32942	547 aa		24.94	■■□□□ 1.58
LTBP4-227	ENST00000600026	GJA8	P48165	433 aa		24.94	■■□□□ 1.58
LTBP4-227	ENST00000600026	SEMA3F	Q13275	785 aa		24.94	■■□□□ 1.58
LTBP4-227	ENST00000600026	INF2	Q27J81	1249 aa		24.94	■■□□□ 1.58
LTBP4-227	ENST00000600026	DUSP28	Q4G0W2	176 aa		24.94	■■□□□ 1.58
LTBP4-227	ENST00000600026	GJC2	Q5T442	439 aa	Predicted RBP	24.94	■■□□□ 1.58
LTBP4-227	ENST00000600026	CCDC62	Q6P9F0	684 aa		24.94	■■□□□ 1.58
LTBP4-227	ENST00000600026	GPRASP2	Q96D09	838 aa		24.94	■■□□□ 1.58
LTBP4-227	ENST00000600026	MXRA8	Q9BRK3	442 aa		24.94	■■□□□ 1.58
LTBP4-227	ENST00000600026	GNE	Q9Y223	722 aa	Known RBP	24.94	■■□□□ 1.58
LTBP4-227	ENST00000600026	FIBP	O43427	364 aa		24.93	■■□□□ 1.58
LTBP4-227	ENST00000600026	EDIL3	O43854	480 aa		24.93	■■□□□ 1.58
LTBP4-227	ENST00000600026	ZNF76	P36508	570 aa		24.93	■■□□□ 1.58
LTBP4-227	ENST00000600026	CEP55	Q53EZ4	464 aa		24.93	■■□□□ 1.58
LTBP4-227	ENST00000600026	RILPL1	Q5EBL4	403 aa		24.93	■■□□□ 1.58
LTBP4-227	ENST00000600026	MYSM1	Q5VVJ2	828 aa		24.93	■■□□□ 1.58
LTBP4-227	ENST00000600026	ZNF396	Q96N95	335 aa	Predicted RBP	24.93	■■□□□ 1.58
LTBP4-227	ENST00000600026	CRISPLD2	Q9H0B8	497 aa		24.93	■■□□□ 1.58
LTBP4-227	ENST00000600026	JADE2	Q9NQC1	790 aa		24.93	■■□□□ 1.58
LTBP4-227	ENST00000600026	XPNPEP3	Q9NQH7	507 aa		24.93	■■□□□ 1.58
LTBP4-227	ENST00000600026	DDX41	Q9UJV9	622 aa	Known RBP	24.93	■■□□□ 1.58
LTBP4-227	ENST00000600026	SYNRG	Q9UMZ2	1314 aa		24.92	■■□□□ 1.58
LTBP4-227	ENST00000600026	FAM86B1	E9PN63	330 aa		24.92	■■□□□ 1.58
LTBP4-227	ENST00000600026	FAM86B2	P0C5J1	330 aa		24.92	■■□□□ 1.58
LTBP4-227	ENST00000600026	CIITA	P33076	1130 aa		24.92	■■□□□ 1.58
LTBP4-227	ENST00000600026	TRAPPC10	P48553	1259 aa		24.92	■■□□□ 1.58
LTBP4-227	ENST00000600026	USP11	P51784	963 aa		24.92	■■□□□ 1.58
LTBP4-227	ENST00000600026	LY6K	Q17RY6	165 aa		24.92	■■□□□ 1.58
LTBP4-227	ENST00000600026	KCNV1	Q6PIU1	500 aa		24.92	■■□□□ 1.58
LTBP4-227	ENST00000600026	CYP2W1	Q8TAV3	490 aa		24.92	■■□□□ 1.58
LTBP4-227	ENST00000600026	COPS5	Q92905	334 aa		24.92	■■□□□ 1.58
LTBP4-227	ENST00000600026	OGDHL	Q9ULD0	1010 aa		24.92	■■□□□ 1.58
LTBP4-227	ENST00000600026	KIAA0100	Q14667	2235 aa	Known RBP	24.92	■■□□□ 1.58
LTBP4-227	ENST00000600026	IGLV3-22	A0A075B6J6	115 aa		24.91	■■□□□ 1.58
LTBP4-227	ENST00000600026	SPATA31C2	B4DYI2	1134 aa		24.91	■■□□□ 1.58
LTBP4-227	ENST00000600026	NKRF	O15226	690 aa	Known RBP eCLIP	24.91	■■□□□ 1.58
LTBP4-227	ENST00000600026	MTMR1	Q13613	665 aa		24.91	■■□□□ 1.58
LTBP4-227	ENST00000600026	NEK8	Q86SG6	692 aa		24.91	■■□□□ 1.58
LTBP4-227	ENST00000600026	TLK2	Q86UE8	772 aa		24.91	■■□□□ 1.58
LTBP4-227	ENST00000600026	NAP1L4	Q99733	375 aa	Known RBP	24.91	■■□□□ 1.58
LTBP4-227	ENST00000600026	ADAMTS4	O75173	837 aa		24.9	■■□□□ 1.58
LTBP4-227	ENST00000600026	PGK1	P00558	417 aa		24.9	■■□□□ 1.58
LTBP4-227	ENST00000600026	TFRC	P02786	760 aa	Known RBP	24.9	■■□□□ 1.58
LTBP4-227	ENST00000600026	UBA1	P22314	1058 aa	Known RBP	24.9	■■□□□ 1.58
LTBP4-227	ENST00000600026	ATL3	Q6DD88	541 aa		24.9	■■□□□ 1.58
LTBP4-227	ENST00000600026	NIPA1	Q7RTP0	329 aa		24.9	■■□□□ 1.58
LTBP4-227	ENST00000600026	OR6J1	Q8NGC5	347 aa		24.9	■■□□□ 1.58
LTBP4-227	ENST00000600026	CDHR1	Q96JP9	859 aa		24.9	■■□□□ 1.58
LTBP4-227	ENST00000600026	UPF3A	Q9H1J1	476 aa	Known RBP	24.9	■■□□□ 1.58
LTBP4-227	ENST00000600026	MEIS1	O00470	390 aa		24.89	■■□□□ 1.58
LTBP4-227	ENST00000600026	TDP2	O95551	362 aa		24.89	■■□□□ 1.58
LTBP4-227	ENST00000600026	AR	P10275	920 aa		24.89	■■□□□ 1.58
LTBP4-227	ENST00000600026	TGFB3	P10600	412 aa		24.89	■■□□□ 1.58
LTBP4-227	ENST00000600026	ATP2B1	P20020	1258 aa		24.89	■■□□□ 1.58
LTBP4-227	ENST00000600026	GJA9	P57773	515 aa		24.89	■■□□□ 1.58
LTBP4-227	ENST00000600026	IRX5	P78411	483 aa	Predicted RBP	24.89	■■□□□ 1.58
LTBP4-227	ENST00000600026	SP2	Q02086	613 aa		24.89	■■□□□ 1.58
LTBP4-227	ENST00000600026	LETM2	Q2VYF4	491 aa		24.89	■■□□□ 1.58
LTBP4-227	ENST00000600026	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	24.89	■■□□□ 1.58
LTBP4-227	ENST00000600026	FAM173B	Q6P4H8	233 aa		24.89	■■□□□ 1.58
LTBP4-227	ENST00000600026	FOXD4L3	Q6VB84	417 aa	Predicted RBP	24.89	■■□□□ 1.58
LTBP4-227	ENST00000600026	PLA2G4D	Q86XP0	818 aa		24.89	■■□□□ 1.58
LTBP4-227	ENST00000600026	TNPO1	Q92973	898 aa	Known RBP	24.89	■■□□□ 1.58
LTBP4-227	ENST00000600026		Q9Y3F1	56 aa		24.89	■■□□□ 1.58
LTBP4-227	ENST00000600026	TCHH	Q07283	1943 aa		24.88	■■□□□ 1.57
LTBP4-227	ENST00000600026	BRCA2	P51587	3418 aa		24.88	■■□□□ 1.57
LTBP4-227	ENST00000600026	MYADML2	A6NDP7	307 aa		24.88	■■□□□ 1.57
LTBP4-227	ENST00000600026	DYNC1LI2	O43237	492 aa	Predicted RBP	24.88	■■□□□ 1.57
LTBP4-227	ENST00000600026	GGPS1	O95749	300 aa		24.88	■■□□□ 1.57
LTBP4-227	ENST00000600026	GH1	P01241	217 aa		24.88	■■□□□ 1.57
LTBP4-227	ENST00000600026	EN2	P19622	333 aa	Predicted RBP	24.88	■■□□□ 1.57
LTBP4-227	ENST00000600026	SET	Q01105	290 aa	Predicted RBP	24.88	■■□□□ 1.57
LTBP4-227	ENST00000600026	ARHGAP1	Q07960	439 aa		24.88	■■□□□ 1.57
LTBP4-227	ENST00000600026	PRR16	Q569H4	304 aa		24.88	■■□□□ 1.57
LTBP4-227	ENST00000600026	TTC38	Q5R3I4	469 aa		24.88	■■□□□ 1.57
LTBP4-227	ENST00000600026	MOXD1	Q6UVY6	613 aa		24.88	■■□□□ 1.57
LTBP4-227	ENST00000600026	LENG9	Q96B70	501 aa		24.88	■■□□□ 1.57
LTBP4-227	ENST00000600026	AP5M1	Q9H0R1	490 aa		24.88	■■□□□ 1.57
LTBP4-227	ENST00000600026	KCNH7	Q9NS40	1196 aa		24.88	■■□□□ 1.57
LTBP4-227	ENST00000600026	PKD2L1	Q9P0L9	805 aa		24.88	■■□□□ 1.57
LTBP4-227	ENST00000600026	CYP3A7-CYP3A51P	A0A087WV96	503 aa		24.87	■■□□□ 1.57
LTBP4-227	ENST00000600026	MAFG	O15525	162 aa		24.87	■■□□□ 1.57
LTBP4-227	ENST00000600026	ATP9A	O75110	1047 aa		24.87	■■□□□ 1.57
LTBP4-227	ENST00000600026	C6orf222	P0C671	652 aa	Predicted RBP	24.87	■■□□□ 1.57
LTBP4-227	ENST00000600026	KCNA2	P16389	499 aa		24.87	■■□□□ 1.57

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms